Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.9□□□□□ -1.95
SRGAP3O43295 Y_RNA.294-201ENST00000364916 102 ntBASIC2.89□□□□□ -1.95
SRGAP3O43295 RNU6-117P-201ENST00000365415 107 ntBASIC2.89□□□□□ -1.95
SRGAP3O43295 RNU6-597P-201ENST00000365620 102 ntBASIC2.89□□□□□ -1.95
SRGAP3O43295 RNU6-1056P-201ENST00000383996 107 ntBASIC2.89□□□□□ -1.95
SRGAP3O43295 SNORA72-201ENST00000384339 132 ntBASIC2.89□□□□□ -1.95
SRGAP3O43295 RNU4-53P-201ENST00000410828 140 ntBASIC2.89□□□□□ -1.95
SRGAP3O43295 RNU6-1328P-201ENST00000410938 106 ntBASIC2.89□□□□□ -1.95
SRGAP3O43295 RNU2-32P-201ENST00000411193 191 ntBASIC2.89□□□□□ -1.95
SRGAP3O43295 AC245047.4-201ENST00000433189 144 ntBASIC2.89□□□□□ -1.95
SRGAP3O43295 RPS15AP28-201ENST00000435088 386 ntBASIC2.89□□□□□ -1.95
SRGAP3O43295 HMGN2P18-201ENST00000450680 270 ntBASIC2.89□□□□□ -1.95
SRGAP3O43295 AC008413.1-201ENST00000511864 177 ntBASIC2.89□□□□□ -1.95
SRGAP3O43295 RNU6-1299P-201ENST00000516316 100 ntBASIC2.89□□□□□ -1.95
SRGAP3O43295 RNU6-56P-201ENST00000516986 93 ntBASIC2.89□□□□□ -1.95
SRGAP3O43295 SCARNA3-201ENST00000517097 143 ntBASIC2.89□□□□□ -1.95
SRGAP3O43295 AC103988.1-201ENST00000566382 2177 ntBASIC2.89□□□□□ -1.95
SRGAP3O43295 MIR5007-201ENST00000583098 95 ntBASIC2.89□□□□□ -1.95
SRGAP3O43295 MIR4438-201ENST00000585271 93 ntBASIC2.89□□□□□ -1.95
SRGAP3O43295 AL021707.8-201ENST00000609428 183 ntBASIC2.89□□□□□ -1.95
SRGAP3O43295 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
SRGAP3O43295 AC009487.4-201ENST00000624969 3585 ntBASIC2.88□□□□□ -1.95
SRGAP3O43295 RNU6-546P-201ENST00000383991 107 ntBASIC2.88□□□□□ -1.95
SRGAP3O43295 RNU6-484P-201ENST00000384016 107 ntBASIC2.88□□□□□ -1.95
SRGAP3O43295 FO393413.1-201ENST00000402892 195 ntBASIC2.88□□□□□ -1.95
SRGAP3O43295 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.88□□□□□ -1.95
SRGAP3O43295 AC018634.1-201ENST00000437554 401 ntBASIC2.88□□□□□ -1.95
SRGAP3O43295 RPL23AP91-201ENST00000569211 455 ntBASIC2.88□□□□□ -1.95
SRGAP3O43295 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SRGAP3O43295 AC138915.1-201ENST00000565427 1685 ntBASIC2.88□□□□□ -1.95
SRGAP3O43295 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SRGAP3O43295 RNU6-235P-201ENST00000362644 107 ntBASIC2.87□□□□□ -1.95
SRGAP3O43295 SNORA25.7-201ENST00000364375 127 ntBASIC2.87□□□□□ -1.95
SRGAP3O43295 RNU2-70P-201ENST00000410718 179 ntBASIC2.87□□□□□ -1.95
SRGAP3O43295 RPS4XP11-201ENST00000446897 772 ntBASIC2.87□□□□□ -1.95
SRGAP3O43295 AC023449.1-201ENST00000454464 154 ntBASIC2.87□□□□□ -1.95
SRGAP3O43295 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.87□□□□□ -1.95
SRGAP3O43295 RPS29P21-201ENST00000496272 170 ntBASIC2.87□□□□□ -1.95
SRGAP3O43295 AC097462.1-201ENST00000514125 324 ntBASIC2.87□□□□□ -1.95
SRGAP3O43295 RN7SKP179-201ENST00000516126 217 ntBASIC2.87□□□□□ -1.95
SRGAP3O43295 RNU2-34P-201ENST00000516534 121 ntBASIC2.87□□□□□ -1.95
SRGAP3O43295 RNU7-172P-201ENST00000517125 64 ntBASIC2.87□□□□□ -1.95
SRGAP3O43295 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.87□□□□□ -1.95
SRGAP3O43295 AC090049.2-201ENST00000550377 109 ntBASIC2.87□□□□□ -1.95
SRGAP3O43295 PRELID2P1-201ENST00000552837 301 ntBASIC2.87□□□□□ -1.95
SRGAP3O43295 SNORD53-201ENST00000579969 78 ntBASIC2.87□□□□□ -1.95
SRGAP3O43295 MIR4435-1-201ENST00000582552 80 ntBASIC2.87□□□□□ -1.95
SRGAP3O43295 MIR3117-201ENST00000584034 78 ntBASIC2.87□□□□□ -1.95
SRGAP3O43295 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.87□□□□□ -1.95
SRGAP3O43295 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.87□□□□□ -1.95
SRGAP3O43295 MIR7157-201ENST00000635801 60 ntBASIC2.87□□□□□ -1.95
SRGAP3O43295 AC080128.1-201ENST00000474389 1917 ntBASIC2.86□□□□□ -1.95
SRGAP3O43295 RNU1-22P-201ENST00000363334 158 ntBASIC2.86□□□□□ -1.95
SRGAP3O43295 Y_RNA.203-201ENST00000364106 102 ntBASIC2.86□□□□□ -1.95
SRGAP3O43295 RNA5SP126-201ENST00000365092 109 ntBASIC2.86□□□□□ -1.95
SRGAP3O43295 MIR1253-201ENST00000408273 105 ntBASIC2.86□□□□□ -1.95
SRGAP3O43295 AL161788.1-201ENST00000441805 169 ntBASIC2.86□□□□□ -1.95
SRGAP3O43295 RNA5SP402-201ENST00000517148 110 ntBASIC2.86□□□□□ -1.95
SRGAP3O43295 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.86□□□□□ -1.95
SRGAP3O43295 AL590808.1-201ENST00000618696 141 ntBASIC2.86□□□□□ -1.95
SRGAP3O43295 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
SRGAP3O43295 Z82195.2-201ENST00000612348 18351 ntBASIC2.85□□□□□ -1.95
SRGAP3O43295 RNU6-834P-201ENST00000362367 110 ntBASIC2.85□□□□□ -1.95
SRGAP3O43295 U8.1-201ENST00000362843 134 ntBASIC2.85□□□□□ -1.95
SRGAP3O43295 RNU6-978P-201ENST00000364371 103 ntBASIC2.85□□□□□ -1.95
SRGAP3O43295 U6atac.2-201ENST00000408644 118 ntBASIC2.85□□□□□ -1.95
SRGAP3O43295 RNU2-55P-201ENST00000411146 174 ntBASIC2.85□□□□□ -1.95
SRGAP3O43295 RNA5SP508-201ENST00000411327 119 ntBASIC2.85□□□□□ -1.95
SRGAP3O43295 RNU6-991P-201ENST00000516168 107 ntBASIC2.85□□□□□ -1.95
SRGAP3O43295 Y_RNA.757-201ENST00000578934 114 ntBASIC2.85□□□□□ -1.95
SRGAP3O43295 MIR2681-201ENST00000581814 105 ntBASIC2.85□□□□□ -1.95
SRGAP3O43295 MIR5739-201ENST00000619803 80 ntBASIC2.85□□□□□ -1.95
SRGAP3O43295 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SRGAP3O43295 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.84□□□□□ -1.95
SRGAP3O43295 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.84□□□□□ -1.95
SRGAP3O43295 Y_RNA.91-201ENST00000363042 107 ntBASIC2.84□□□□□ -1.95
SRGAP3O43295 RNU6-1064P-201ENST00000410626 104 ntBASIC2.84□□□□□ -1.95
SRGAP3O43295 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.84□□□□□ -1.95
SRGAP3O43295 SNORA4.4-201ENST00000515921 135 ntBASIC2.84□□□□□ -1.95
SRGAP3O43295 AC011604.1-201ENST00000545978 196 ntBASIC2.84□□□□□ -1.95
SRGAP3O43295 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.84□□□□□ -1.95
SRGAP3O43295 uc_338.4-201ENST00000616635 176 ntBASIC2.84□□□□□ -1.95
SRGAP3O43295 MIR6766-201ENST00000622641 72 ntBASIC2.84□□□□□ -1.95
SRGAP3O43295 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.84□□□□□ -1.95
SRGAP3O43295 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.84□□□□□ -1.96
SRGAP3O43295 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.96
SRGAP3O43295 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
SRGAP3O43295 RNU1-23P-201ENST00000363361 144 ntBASIC2.83□□□□□ -1.96
SRGAP3O43295 RNU6-153P-201ENST00000364422 104 ntBASIC2.83□□□□□ -1.96
SRGAP3O43295 Y_RNA.621-201ENST00000411065 96 ntBASIC2.83□□□□□ -1.96
SRGAP3O43295 MICF-203ENST00000432679 129 ntBASIC2.83□□□□□ -1.96
SRGAP3O43295 HMGN2P34-201ENST00000437647 269 ntBASIC2.83□□□□□ -1.96
SRGAP3O43295 AL357134.1-201ENST00000445848 426 ntBASIC2.83□□□□□ -1.96
SRGAP3O43295 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.83□□□□□ -1.96
SRGAP3O43295 SEM1P1-201ENST00000506694 209 ntBASIC2.83□□□□□ -1.96
SRGAP3O43295 SNORD77.4-201ENST00000516158 81 ntBASIC2.83□□□□□ -1.96
SRGAP3O43295 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.83□□□□□ -1.96
SRGAP3O43295 AC091544.4-201ENST00000555268 342 ntBASIC2.83□□□□□ -1.96
SRGAP3O43295 MTND5P34-201ENST00000568888 325 ntBASIC2.83□□□□□ -1.96
SRGAP3O43295 AL137847.3-201ENST00000611521 109 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms