Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.33□□□□□ -2.36
UPK1AO00322 Y_RNA.2-201ENST00000362330 96 ntBASIC0.32□□□□□ -2.36
UPK1AO00322 SNORD113.3-201ENST00000364630 78 ntBASIC0.32□□□□□ -2.36
UPK1AO00322 Y_RNA.354-201ENST00000365448 111 ntBASIC0.32□□□□□ -2.36
UPK1AO00322 Y_RNA.358-201ENST00000365491 99 ntBASIC0.32□□□□□ -2.36
UPK1AO00322 SNORD105-201ENST00000386910 85 ntBASIC0.32□□□□□ -2.36
UPK1AO00322 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
UPK1AO00322 MIR936-201ENST00000401264 98 ntBASIC0.32□□□□□ -2.36
UPK1AO00322 RNA5SP193-201ENST00000410353 107 ntBASIC0.32□□□□□ -2.36
UPK1AO00322 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.32□□□□□ -2.36
UPK1AO00322 AC244098.3-201ENST00000424803 96 ntBASIC0.32□□□□□ -2.36
UPK1AO00322 RNA5SP436-201ENST00000516020 115 ntBASIC0.32□□□□□ -2.36
UPK1AO00322 RNU6-1337P-201ENST00000516525 95 ntBASIC0.32□□□□□ -2.36
UPK1AO00322 SNORD45.4-201ENST00000516629 73 ntBASIC0.32□□□□□ -2.36
UPK1AO00322 Y_RNA.714-201ENST00000517065 90 ntBASIC0.32□□□□□ -2.36
UPK1AO00322 AC026407.1-201ENST00000518369 204 ntBASIC0.32□□□□□ -2.36
UPK1AO00322 AC022709.1-201ENST00000615967 87 ntBASIC0.32□□□□□ -2.36
UPK1AO00322 RMST_2.1-201ENST00000617263 136 ntBASIC0.32□□□□□ -2.36
UPK1AO00322 MIR1-1-201ENST00000362147 71 ntBASIC0.31□□□□□ -2.36
UPK1AO00322 Y_RNA.116-201ENST00000363292 103 ntBASIC0.31□□□□□ -2.36
UPK1AO00322 snoU2-30.1-201ENST00000365012 70 ntBASIC0.31□□□□□ -2.36
UPK1AO00322 Y_RNA.402-201ENST00000383972 102 ntBASIC0.31□□□□□ -2.36
UPK1AO00322 SNORA50A-201ENST00000384225 134 ntBASIC0.31□□□□□ -2.36
UPK1AO00322 SNORA2B-201ENST00000384583 137 ntBASIC0.31□□□□□ -2.36
UPK1AO00322 AC074085.1-201ENST00000413598 418 ntBASIC0.31□□□□□ -2.36
UPK1AO00322 HMGN2P32-201ENST00000444648 269 ntBASIC0.31□□□□□ -2.36
UPK1AO00322 AC105029.1-201ENST00000520250 669 ntBASIC0.31□□□□□ -2.36
UPK1AO00322 AC022616.4-201ENST00000522985 181 ntBASIC0.31□□□□□ -2.36
UPK1AO00322 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.31□□□□□ -2.36
UPK1AO00322 AC245505.1-201ENST00000556398 224 ntBASIC0.31□□□□□ -2.36
UPK1AO00322 AF250324.2-201ENST00000608299 610 ntBASIC0.31□□□□□ -2.36
UPK1AO00322 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.31□□□□□ -2.36
UPK1AO00322 SNORD116-1-201ENST00000384335 95 ntBASIC0.3□□□□□ -2.36
UPK1AO00322 RNU6-831P-201ENST00000384548 107 ntBASIC0.3□□□□□ -2.36
UPK1AO00322 RNU6-131P-201ENST00000391144 107 ntBASIC0.3□□□□□ -2.36
UPK1AO00322 MIR1827-201ENST00000408549 66 ntBASIC0.3□□□□□ -2.36
UPK1AO00322 SNORD12B-201ENST00000410433 91 ntBASIC0.3□□□□□ -2.36
UPK1AO00322 RNU6-1304P-201ENST00000411374 106 ntBASIC0.3□□□□□ -2.36
UPK1AO00322 MRPS18CP6-201ENST00000423587 223 ntBASIC0.3□□□□□ -2.36
UPK1AO00322 AL353997.1-201ENST00000432936 108 ntBASIC0.3□□□□□ -2.36
UPK1AO00322 MTND1P4-201ENST00000435196 415 ntBASIC0.3□□□□□ -2.36
UPK1AO00322 SNORD123-201ENST00000459473 70 ntBASIC0.3□□□□□ -2.36
UPK1AO00322 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.3□□□□□ -2.36
UPK1AO00322 AC006380.1-201ENST00000603598 186 ntBASIC0.3□□□□□ -2.36
UPK1AO00322 AC005014.2-201ENST00000607795 599 ntBASIC0.3□□□□□ -2.36
UPK1AO00322 AC243829.6-201ENST00000612652 106 ntBASIC0.3□□□□□ -2.36
UPK1AO00322 MIR6516-201ENST00000630554 81 ntBASIC0.3□□□□□ -2.36
UPK1AO00322 Y_RNA.253-201ENST00000364562 112 ntBASIC0.29□□□□□ -2.36
UPK1AO00322 Y_RNA.559-201ENST00000384686 107 ntBASIC0.29□□□□□ -2.36
UPK1AO00322 MIR522-201ENST00000385071 87 ntBASIC0.29□□□□□ -2.36
UPK1AO00322 MTND3P21-201ENST00000433774 331 ntBASIC0.29□□□□□ -2.36
UPK1AO00322 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.29□□□□□ -2.36
UPK1AO00322 U8.22-201ENST00000459141 133 ntBASIC0.29□□□□□ -2.36
UPK1AO00322 AC018462.2-201ENST00000605375 395 ntBASIC0.29□□□□□ -2.36
UPK1AO00322 AL355073.2-201ENST00000612106 557 ntBASIC0.29□□□□□ -2.36
UPK1AO00322 MIR6734-201ENST00000621166 68 ntBASIC0.29□□□□□ -2.36
UPK1AO00322 MIR4251-201ENST00000635819 61 ntBASIC0.29□□□□□ -2.36
UPK1AO00322 Y_RNA.9-201ENST00000362354 101 ntBASIC0.28□□□□□ -2.36
UPK1AO00322 RNU6-874P-201ENST00000362390 105 ntBASIC0.28□□□□□ -2.36
UPK1AO00322 Y_RNA.157-201ENST00000363638 102 ntBASIC0.28□□□□□ -2.36
UPK1AO00322 SNORD115-30-201ENST00000364117 82 ntBASIC0.28□□□□□ -2.36
UPK1AO00322 RNU6-42P-201ENST00000384165 107 ntBASIC0.28□□□□□ -2.36
UPK1AO00322 RNU6-318P-201ENST00000384283 103 ntBASIC0.28□□□□□ -2.36
UPK1AO00322 RNA5SP118-201ENST00000410385 109 ntBASIC0.28□□□□□ -2.36
UPK1AO00322 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.28□□□□□ -2.36
UPK1AO00322 AC098826.2-201ENST00000452011 651 ntBASIC0.28□□□□□ -2.36
UPK1AO00322 U8.19-201ENST00000459095 133 ntBASIC0.28□□□□□ -2.36
UPK1AO00322 RNU6-408P-201ENST00000515910 100 ntBASIC0.28□□□□□ -2.36
UPK1AO00322 RN7SKP12-201ENST00000516275 143 ntBASIC0.28□□□□□ -2.36
UPK1AO00322 Y_RNA.682-201ENST00000516457 100 ntBASIC0.28□□□□□ -2.36
UPK1AO00322 RNU6-1016P-201ENST00000516689 94 ntBASIC0.28□□□□□ -2.36
UPK1AO00322 MTND2P38-201ENST00000522536 667 ntBASIC0.28□□□□□ -2.36
UPK1AO00322 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.28□□□□□ -2.36
UPK1AO00322 AC004467.1-201ENST00000615678 330 ntBASIC0.28□□□□□ -2.36
UPK1AO00322 AC008133.2-201ENST00000624540 351 ntBASIC0.28□□□□□ -2.36
UPK1AO00322 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
UPK1AO00322 RNU6-654P-201ENST00000364373 107 ntBASIC0.27□□□□□ -2.37
UPK1AO00322 Y_RNA.473-201ENST00000384333 102 ntBASIC0.27□□□□□ -2.37
UPK1AO00322 MIR181A1-201ENST00000385026 110 ntBASIC0.27□□□□□ -2.37
UPK1AO00322 MIR140-201ENST00000385282 100 ntBASIC0.27□□□□□ -2.37
UPK1AO00322 MTND2P22-201ENST00000444325 1033 ntBASIC0.27□□□□□ -2.37
UPK1AO00322 MTND1P29-201ENST00000448112 647 ntBASIC0.27□□□□□ -2.37
UPK1AO00322 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.27□□□□□ -2.37
UPK1AO00322 RNU2-12P-201ENST00000517216 168 ntBASIC0.27□□□□□ -2.37
UPK1AO00322 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.27□□□□□ -2.37
UPK1AO00322 AC012433.1-201ENST00000588916 398 ntBASIC0.27□□□□□ -2.37
UPK1AO00322 AC104695.3-201ENST00000604052 296 ntBASIC0.27□□□□□ -2.37
UPK1AO00322 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.27□□□□□ -2.37
UPK1AO00322 RNU6-1301P-201ENST00000362724 104 ntBASIC0.26□□□□□ -2.37
UPK1AO00322 RNU6-593P-201ENST00000364716 112 ntBASIC0.26□□□□□ -2.37
UPK1AO00322 VTRNA1-3-201ENST00000365645 89 ntBASIC0.26□□□□□ -2.37
UPK1AO00322 Y_RNA.517-201ENST00000384551 106 ntBASIC0.26□□□□□ -2.37
UPK1AO00322 Y_RNA.573-201ENST00000384763 105 ntBASIC0.26□□□□□ -2.37
UPK1AO00322 AL031003.1-201ENST00000404229 172 ntBASIC0.26□□□□□ -2.37
UPK1AO00322 Y_RNA.594-201ENST00000410373 140 ntBASIC0.26□□□□□ -2.37
UPK1AO00322 MTCO2P12-201ENST00000427426 682 ntBASIC0.26□□□□□ -2.37
UPK1AO00322 AC105313.1-201ENST00000509121 353 ntBASIC0.26□□□□□ -2.37
UPK1AO00322 MIR2115-201ENST00000516657 100 ntBASIC0.26□□□□□ -2.37
UPK1AO00322 AC015540.1-201ENST00000615828 501 ntBASIC0.26□□□□□ -2.37
UPK1AO00322 AC022079.1-201ENST00000621546 602 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms