Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC244098.3-201ENST00000424803 96 ntBASIC0.44□□□□□ -2.34
AP3B1O00203 Y_RNA.682-201ENST00000516457 100 ntBASIC0.44□□□□□ -2.34
AP3B1O00203 RNU7-43P-201ENST00000516554 64 ntBASIC0.44□□□□□ -2.34
AP3B1O00203 RNU2-12P-201ENST00000517216 168 ntBASIC0.44□□□□□ -2.34
AP3B1O00203 AC024909.2-201ENST00000553035 286 ntBASIC0.44□□□□□ -2.34
AP3B1O00203 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.44□□□□□ -2.34
AP3B1O00203 Y_RNA.9-201ENST00000362354 101 ntBASIC0.43□□□□□ -2.34
AP3B1O00203 Y_RNA.89-201ENST00000363031 102 ntBASIC0.43□□□□□ -2.34
AP3B1O00203 RNU6-654P-201ENST00000364373 107 ntBASIC0.43□□□□□ -2.34
AP3B1O00203 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
AP3B1O00203 MIR15B-201ENST00000385045 98 ntBASIC0.43□□□□□ -2.34
AP3B1O00203 MIR522-201ENST00000385071 87 ntBASIC0.43□□□□□ -2.34
AP3B1O00203 SNORD111-201ENST00000408139 94 ntBASIC0.43□□□□□ -2.34
AP3B1O00203 Y_RNA.594-201ENST00000410373 140 ntBASIC0.43□□□□□ -2.34
AP3B1O00203 RNA5SP118-201ENST00000410385 109 ntBASIC0.43□□□□□ -2.34
AP3B1O00203 RNU6-994P-201ENST00000410507 111 ntBASIC0.43□□□□□ -2.34
AP3B1O00203 MLLT10P1-201ENST00000418346 262 ntBASIC0.43□□□□□ -2.34
AP3B1O00203 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.43□□□□□ -2.34
AP3B1O00203 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.43□□□□□ -2.34
AP3B1O00203 RNU4-49P-201ENST00000516080 140 ntBASIC0.43□□□□□ -2.34
AP3B1O00203 RNU11-2P-201ENST00000516898 142 ntBASIC0.43□□□□□ -2.34
AP3B1O00203 AF235103.2-201ENST00000525753 346 ntBASIC0.43□□□□□ -2.34
AP3B1O00203 AL512605.2-201ENST00000592972 256 ntBASIC0.43□□□□□ -2.34
AP3B1O00203 Y_RNA.253-201ENST00000364562 112 ntBASIC0.42□□□□□ -2.34
AP3B1O00203 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.42□□□□□ -2.34
AP3B1O00203 RNA5SP95-201ENST00000410319 137 ntBASIC0.42□□□□□ -2.34
AP3B1O00203 SNORD12B-201ENST00000410433 91 ntBASIC0.42□□□□□ -2.34
AP3B1O00203 AC244023.1-201ENST00000426884 112 ntBASIC0.42□□□□□ -2.34
AP3B1O00203 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.42□□□□□ -2.34
AP3B1O00203 SNORA25.10-201ENST00000515926 124 ntBASIC0.42□□□□□ -2.34
AP3B1O00203 Y_RNA.670-201ENST00000516255 105 ntBASIC0.42□□□□□ -2.34
AP3B1O00203 RN7SKP12-201ENST00000516275 143 ntBASIC0.42□□□□□ -2.34
AP3B1O00203 SNORD45.4-201ENST00000516629 73 ntBASIC0.42□□□□□ -2.34
AP3B1O00203 RNU6-1016P-201ENST00000516689 94 ntBASIC0.42□□□□□ -2.34
AP3B1O00203 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.42□□□□□ -2.34
AP3B1O00203 AC055872.1-201ENST00000570978 278 ntBASIC0.42□□□□□ -2.34
AP3B1O00203 AC011195.1-201ENST00000578177 177 ntBASIC0.42□□□□□ -2.34
AP3B1O00203 AC242498.1-201ENST00000604134 111 ntBASIC0.42□□□□□ -2.34
AP3B1O00203 AC243994.1-201ENST00000618627 109 ntBASIC0.42□□□□□ -2.34
AP3B1O00203 RNU6-1301P-201ENST00000362724 104 ntBASIC0.41□□□□□ -2.34
AP3B1O00203 Y_RNA.172-201ENST00000363765 102 ntBASIC0.41□□□□□ -2.34
AP3B1O00203 Y_RNA.224-201ENST00000364308 111 ntBASIC0.41□□□□□ -2.34
AP3B1O00203 MIR1302-7-201ENST00000408841 72 ntBASIC0.41□□□□□ -2.34
AP3B1O00203 RNU6-1050P-201ENST00000410388 107 ntBASIC0.41□□□□□ -2.34
AP3B1O00203 AL392103.1-201ENST00000447000 198 ntBASIC0.41□□□□□ -2.34
AP3B1O00203 SNORD123-201ENST00000459473 70 ntBASIC0.41□□□□□ -2.34
AP3B1O00203 RPL7P42-201ENST00000481005 679 ntBASIC0.41□□□□□ -2.34
AP3B1O00203 RNU6-229P-201ENST00000516614 102 ntBASIC0.41□□□□□ -2.34
AP3B1O00203 MIR1244-1-201ENST00000612829 85 ntBASIC0.41□□□□□ -2.34
AP3B1O00203 AC004467.1-201ENST00000615678 330 ntBASIC0.41□□□□□ -2.34
AP3B1O00203 AC015540.1-201ENST00000615828 501 ntBASIC0.41□□□□□ -2.34
AP3B1O00203 MIR1244-3-201ENST00000635744 85 ntBASIC0.41□□□□□ -2.34
AP3B1O00203 MIR1244-2-201ENST00000636449 85 ntBASIC0.41□□□□□ -2.34
AP3B1O00203 MIR1244-4-202ENST00000636813 85 ntBASIC0.41□□□□□ -2.34
AP3B1O00203 AC027514.1-201ENST00000588561 1603 ntBASIC0.4□□□□□ -2.35
AP3B1O00203 SNORD113.3-201ENST00000364630 78 ntBASIC0.4□□□□□ -2.35
AP3B1O00203 Y_RNA.450-201ENST00000384198 113 ntBASIC0.4□□□□□ -2.35
AP3B1O00203 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.4□□□□□ -2.35
AP3B1O00203 RNA5SP222-201ENST00000411039 105 ntBASIC0.4□□□□□ -2.35
AP3B1O00203 RNU6-1304P-201ENST00000411374 106 ntBASIC0.4□□□□□ -2.35
AP3B1O00203 AC098934.3-201ENST00000430450 190 ntBASIC0.4□□□□□ -2.35
AP3B1O00203 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.4□□□□□ -2.35
AP3B1O00203 RPS29P25-201ENST00000481709 171 ntBASIC0.4□□□□□ -2.35
AP3B1O00203 AC093534.1-201ENST00000504977 132 ntBASIC0.4□□□□□ -2.35
AP3B1O00203 RNU6-408P-201ENST00000515910 100 ntBASIC0.4□□□□□ -2.35
AP3B1O00203 RNU6-1223P-201ENST00000517124 104 ntBASIC0.4□□□□□ -2.35
AP3B1O00203 AC018638.8-201ENST00000588755 281 ntBASIC0.4□□□□□ -2.35
AP3B1O00203 MIR6516-201ENST00000630554 81 ntBASIC0.4□□□□□ -2.35
AP3B1O00203 RNU6-1084P-201ENST00000362498 107 ntBASIC0.39□□□□□ -2.35
AP3B1O00203 RNU6-961P-201ENST00000363893 105 ntBASIC0.39□□□□□ -2.35
AP3B1O00203 RNU6-593P-201ENST00000364716 112 ntBASIC0.39□□□□□ -2.35
AP3B1O00203 Y_RNA.295-201ENST00000364918 102 ntBASIC0.39□□□□□ -2.35
AP3B1O00203 SNORA36.2-201ENST00000384004 127 ntBASIC0.39□□□□□ -2.35
AP3B1O00203 MIR548F5-201ENST00000408421 86 ntBASIC0.39□□□□□ -2.35
AP3B1O00203 MIR1827-201ENST00000408549 66 ntBASIC0.39□□□□□ -2.35
AP3B1O00203 MTND2P22-201ENST00000444325 1033 ntBASIC0.39□□□□□ -2.35
AP3B1O00203 AC022616.4-201ENST00000522985 181 ntBASIC0.39□□□□□ -2.35
AP3B1O00203 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.39□□□□□ -2.35
AP3B1O00203 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.39□□□□□ -2.35
AP3B1O00203 MIR5087-201ENST00000635826 76 ntBASIC0.39□□□□□ -2.35
AP3B1O00203 AC134026.1-201ENST00000623249 2239 ntBASIC0.39□□□□□ -2.35
AP3B1O00203 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.39□□□□□ -2.35
AP3B1O00203 RNU6-926P-201ENST00000384075 107 ntBASIC0.38□□□□□ -2.35
AP3B1O00203 SNORD105-201ENST00000386910 85 ntBASIC0.38□□□□□ -2.35
AP3B1O00203 AL031003.1-201ENST00000404229 172 ntBASIC0.38□□□□□ -2.35
AP3B1O00203 MRPS18CP6-201ENST00000423587 223 ntBASIC0.38□□□□□ -2.35
AP3B1O00203 MTND1P4-201ENST00000435196 415 ntBASIC0.38□□□□□ -2.35
AP3B1O00203 RPS3AP52-201ENST00000435639 297 ntBASIC0.38□□□□□ -2.35
AP3B1O00203 RNU6-329P-201ENST00000459618 107 ntBASIC0.38□□□□□ -2.35
AP3B1O00203 AC012433.1-201ENST00000588916 398 ntBASIC0.38□□□□□ -2.35
AP3B1O00203 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
AP3B1O00203 SNORD50B-201ENST00000364995 70 ntBASIC0.37□□□□□ -2.35
AP3B1O00203 snoU2-30.1-201ENST00000365012 70 ntBASIC0.37□□□□□ -2.35
AP3B1O00203 Y_RNA.404-201ENST00000383978 102 ntBASIC0.37□□□□□ -2.35
AP3B1O00203 SNORA2B-201ENST00000384583 137 ntBASIC0.37□□□□□ -2.35
AP3B1O00203 Y_RNA.573-201ENST00000384763 105 ntBASIC0.37□□□□□ -2.35
AP3B1O00203 SNORD28B-201ENST00000390993 75 ntBASIC0.37□□□□□ -2.35
AP3B1O00203 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.37□□□□□ -2.35
AP3B1O00203 MIR548K-201ENST00000408406 116 ntBASIC0.37□□□□□ -2.35
AP3B1O00203 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms