Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RNU6-131P-201ENST00000391144 107 ntBASIC0.44□□□□□ -2.34
SMKR1H3BMG3 SNORA75.4-201ENST00000391278 119 ntBASIC0.44□□□□□ -2.34
SMKR1H3BMG3 RNU6-994P-201ENST00000410507 111 ntBASIC0.44□□□□□ -2.34
SMKR1H3BMG3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.44□□□□□ -2.34
SMKR1H3BMG3 Y_RNA.714-201ENST00000517065 90 ntBASIC0.44□□□□□ -2.34
SMKR1H3BMG3 AF235103.2-201ENST00000525753 346 ntBASIC0.44□□□□□ -2.34
SMKR1H3BMG3 AC005972.2-201ENST00000604690 348 ntBASIC0.44□□□□□ -2.34
SMKR1H3BMG3 AC108706.1-201ENST00000611053 297 ntBASIC0.44□□□□□ -2.34
SMKR1H3BMG3 uc_338.17-201ENST00000619633 179 ntBASIC0.44□□□□□ -2.34
SMKR1H3BMG3 MIR6835-201ENST00000621552 64 ntBASIC0.44□□□□□ -2.34
SMKR1H3BMG3 Y_RNA.88-201ENST00000363029 99 ntBASIC0.43□□□□□ -2.34
SMKR1H3BMG3 Y_RNA.172-201ENST00000363765 102 ntBASIC0.43□□□□□ -2.34
SMKR1H3BMG3 SNORD113.3-201ENST00000364630 78 ntBASIC0.43□□□□□ -2.34
SMKR1H3BMG3 SNORA69.1-201ENST00000390904 137 ntBASIC0.43□□□□□ -2.34
SMKR1H3BMG3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.43□□□□□ -2.34
SMKR1H3BMG3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.43□□□□□ -2.34
SMKR1H3BMG3 MTND1P4-201ENST00000435196 415 ntBASIC0.43□□□□□ -2.34
SMKR1H3BMG3 AL392103.1-201ENST00000447000 198 ntBASIC0.43□□□□□ -2.34
SMKR1H3BMG3 FCF1P4-201ENST00000448326 183 ntBASIC0.43□□□□□ -2.34
SMKR1H3BMG3 AL157398.1-201ENST00000452981 186 ntBASIC0.43□□□□□ -2.34
SMKR1H3BMG3 AC011352.1-201ENST00000512300 793 ntBASIC0.43□□□□□ -2.34
SMKR1H3BMG3 AC016727.1-205ENST00000605437 569 ntBASIC0.43□□□□□ -2.34
SMKR1H3BMG3 AC002553.4-201ENST00000616896 331 ntBASIC0.43□□□□□ -2.34
SMKR1H3BMG3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.43□□□□□ -2.34
SMKR1H3BMG3 AC134026.1-201ENST00000623249 2239 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.42□□□□□ -2.34
SMKR1H3BMG3 Y_RNA.140-201ENST00000363474 103 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 Y_RNA.327-201ENST00000365201 102 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 RNU6-926P-201ENST00000384075 107 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 SNORA72-201ENST00000384339 132 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 MIR508-201ENST00000384857 115 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 MIR625-201ENST00000385047 85 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 MIR1277-201ENST00000408536 78 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 Y_RNA.592-201ENST00000410274 109 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 RNU6-1304P-201ENST00000411374 106 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 AC244098.3-201ENST00000424803 96 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 AC004941.2-201ENST00000427009 228 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 CHEK2P4-201ENST00000450340 246 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.42□□□□□ -2.34
SMKR1H3BMG3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.42□□□□□ -2.34
SMKR1H3BMG3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.42□□□□□ -2.34
SMKR1H3BMG3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 AC093027.1-201ENST00000546698 429 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 AC011195.1-201ENST00000578177 177 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 Z83818.1-201ENST00000603584 150 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 AL590095.2-201ENST00000604136 117 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 AC087588.2-201ENST00000617667 426 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 AL353997.5-201ENST00000618886 171 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.42□□□□□ -2.34
SMKR1H3BMG3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.42□□□□□ -2.34
SMKR1H3BMG3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
SMKR1H3BMG3 RNU6-324P-201ENST00000363957 106 ntBASIC0.41□□□□□ -2.34
SMKR1H3BMG3 RNU6-945P-201ENST00000383947 107 ntBASIC0.41□□□□□ -2.34
SMKR1H3BMG3 Y_RNA.577-201ENST00000384794 101 ntBASIC0.41□□□□□ -2.34
SMKR1H3BMG3 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.41□□□□□ -2.34
SMKR1H3BMG3 MIR1827-201ENST00000408549 66 ntBASIC0.41□□□□□ -2.34
SMKR1H3BMG3 MIR1302-7-201ENST00000408841 72 ntBASIC0.41□□□□□ -2.34
SMKR1H3BMG3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.41□□□□□ -2.34
SMKR1H3BMG3 SNRPGP10-201ENST00000432323 225 ntBASIC0.41□□□□□ -2.34
SMKR1H3BMG3 MTATP6P26-201ENST00000445926 662 ntBASIC0.41□□□□□ -2.34
SMKR1H3BMG3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.41□□□□□ -2.34
SMKR1H3BMG3 AC105313.1-201ENST00000509121 353 ntBASIC0.41□□□□□ -2.34
SMKR1H3BMG3 RNU6-1012P-201ENST00000516606 109 ntBASIC0.41□□□□□ -2.34
SMKR1H3BMG3 RNU6-113P-201ENST00000516653 101 ntBASIC0.41□□□□□ -2.34
SMKR1H3BMG3 AC004812.1-201ENST00000540773 146 ntBASIC0.41□□□□□ -2.34
SMKR1H3BMG3 AC005176.2-201ENST00000596933 147 ntBASIC0.41□□□□□ -2.34
SMKR1H3BMG3 AC008133.2-201ENST00000624540 351 ntBASIC0.41□□□□□ -2.34
SMKR1H3BMG3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.41□□□□□ -2.34
SMKR1H3BMG3 MIR6516-201ENST00000630554 81 ntBASIC0.41□□□□□ -2.34
SMKR1H3BMG3 MIR4251-201ENST00000635819 61 ntBASIC0.41□□□□□ -2.34
SMKR1H3BMG3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
SMKR1H3BMG3 MIR373-201ENST00000362273 69 ntBASIC0.4□□□□□ -2.35
SMKR1H3BMG3 RNA5SP99-201ENST00000364020 114 ntBASIC0.4□□□□□ -2.35
SMKR1H3BMG3 RNU6-654P-201ENST00000364373 107 ntBASIC0.4□□□□□ -2.35
SMKR1H3BMG3 Y_RNA.368-201ENST00000365547 113 ntBASIC0.4□□□□□ -2.35
SMKR1H3BMG3 SNORD105-201ENST00000386910 85 ntBASIC0.4□□□□□ -2.35
SMKR1H3BMG3 MIR548F1-201ENST00000408667 84 ntBASIC0.4□□□□□ -2.35
SMKR1H3BMG3 RNU6-1156P-201ENST00000410365 100 ntBASIC0.4□□□□□ -2.35
SMKR1H3BMG3 RNU6-1199P-201ENST00000411249 104 ntBASIC0.4□□□□□ -2.35
SMKR1H3BMG3 AC108210.2-201ENST00000503681 201 ntBASIC0.4□□□□□ -2.35
SMKR1H3BMG3 RNU6-436P-201ENST00000516171 114 ntBASIC0.4□□□□□ -2.35
SMKR1H3BMG3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.4□□□□□ -2.35
SMKR1H3BMG3 AP000942.3-201ENST00000603702 160 ntBASIC0.4□□□□□ -2.35
SMKR1H3BMG3 RNU6-626P-201ENST00000363354 107 ntBASIC0.39□□□□□ -2.35
SMKR1H3BMG3 RNU6-20P-201ENST00000384106 107 ntBASIC0.39□□□□□ -2.35
SMKR1H3BMG3 Y_RNA.446-201ENST00000384178 104 ntBASIC0.39□□□□□ -2.35
SMKR1H3BMG3 RNU6-1215P-201ENST00000384441 102 ntBASIC0.39□□□□□ -2.35
SMKR1H3BMG3 AC005534.2-201ENST00000431047 433 ntBASIC0.39□□□□□ -2.35
SMKR1H3BMG3 RNU6-718P-201ENST00000516166 105 ntBASIC0.39□□□□□ -2.35
SMKR1H3BMG3 RNU6-155P-201ENST00000516347 100 ntBASIC0.39□□□□□ -2.35
SMKR1H3BMG3 RNU6-264P-201ENST00000517134 104 ntBASIC0.39□□□□□ -2.35
SMKR1H3BMG3 MIR4300-201ENST00000581016 96 ntBASIC0.39□□□□□ -2.35
SMKR1H3BMG3 MIR548AR-201ENST00000582191 57 ntBASIC0.39□□□□□ -2.35
SMKR1H3BMG3 AC011712.1-201ENST00000588959 234 ntBASIC0.39□□□□□ -2.35
SMKR1H3BMG3 AC060780.3-201ENST00000589464 80 ntBASIC0.39□□□□□ -2.35
SMKR1H3BMG3 AC104695.3-201ENST00000604052 296 ntBASIC0.39□□□□□ -2.35
SMKR1H3BMG3 AL442644.1-201ENST00000454390 3105 ntBASIC0.39□□□□□ -2.35
SMKR1H3BMG3 MIR1-1-201ENST00000362147 71 ntBASIC0.38□□□□□ -2.35
SMKR1H3BMG3 Y_RNA.72-201ENST00000362894 103 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms