Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PRR13P7-201ENST00000605538 430 ntBASIC1.3□□□□□ -2.2
NPIPA3F8WFD2 AL121655.1-201ENST00000605811 308 ntBASIC1.3□□□□□ -2.2
NPIPA3F8WFD2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.29□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.331-201ENST00000365267 102 ntBASIC1.29□□□□□ -2.2
NPIPA3F8WFD2 SNORD14.1-201ENST00000365609 90 ntBASIC1.29□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.439-201ENST00000384119 94 ntBASIC1.29□□□□□ -2.2
NPIPA3F8WFD2 SNORD26-201ENST00000384147 75 ntBASIC1.29□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.471-201ENST00000384312 102 ntBASIC1.29□□□□□ -2.2
NPIPA3F8WFD2 RNU6-424P-201ENST00000384367 105 ntBASIC1.29□□□□□ -2.2
NPIPA3F8WFD2 MIR320A-201ENST00000385302 82 ntBASIC1.29□□□□□ -2.2
NPIPA3F8WFD2 RNA5SP482-201ENST00000391269 118 ntBASIC1.29□□□□□ -2.2
NPIPA3F8WFD2 RNU2-61P-201ENST00000411069 191 ntBASIC1.29□□□□□ -2.2
NPIPA3F8WFD2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.29□□□□□ -2.2
NPIPA3F8WFD2 AC005042.3-201ENST00000453230 174 ntBASIC1.29□□□□□ -2.2
NPIPA3F8WFD2 AC093850.1-201ENST00000454121 251 ntBASIC1.29□□□□□ -2.2
NPIPA3F8WFD2 U8.20-201ENST00000459445 131 ntBASIC1.29□□□□□ -2.2
NPIPA3F8WFD2 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.29□□□□□ -2.2
NPIPA3F8WFD2 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.29□□□□□ -2.2
NPIPA3F8WFD2 AC040926.1-201ENST00000530195 238 ntBASIC1.29□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.31-201ENST00000362574 102 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.143-201ENST00000363520 106 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.226-201ENST00000364337 114 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 RNU4-41P-201ENST00000364426 143 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 RNU4-76P-201ENST00000364509 141 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 SNORD42.2-201ENST00000365570 69 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.395-201ENST00000383945 109 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 RNU6-1080P-201ENST00000383982 107 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.424-201ENST00000384063 103 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.445-201ENST00000384168 102 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 RNU6-937P-201ENST00000384325 106 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.526-201ENST00000384572 110 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 MCFD2P1-201ENST00000417812 300 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 Z98949.2-201ENST00000440996 144 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 RPS4XP11-201ENST00000446897 772 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 AC092991.1-201ENST00000477176 376 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 RNU7-12P-201ENST00000516030 62 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 RNU7-110P-201ENST00000516891 62 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 AL512310.8-201ENST00000550183 120 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 CYP3A52P-201ENST00000563326 91 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 AC011373.1-201ENST00000607270 237 ntBASIC1.28□□□□□ -2.2
NPIPA3F8WFD2 U8.1-201ENST00000362843 134 ntBASIC1.27□□□□□ -2.21
NPIPA3F8WFD2 Y_RNA.462-201ENST00000384268 102 ntBASIC1.27□□□□□ -2.21
NPIPA3F8WFD2 MIR1302-11-201ENST00000408051 138 ntBASIC1.27□□□□□ -2.21
NPIPA3F8WFD2 MIR1302-9-201ENST00000408365 138 ntBASIC1.27□□□□□ -2.21
NPIPA3F8WFD2 MIR1302-10-201ENST00000408734 138 ntBASIC1.27□□□□□ -2.21
NPIPA3F8WFD2 RNU4-30P-201ENST00000410245 143 ntBASIC1.27□□□□□ -2.21
NPIPA3F8WFD2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.27□□□□□ -2.21
NPIPA3F8WFD2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.27□□□□□ -2.21
NPIPA3F8WFD2 MTND4P19-201ENST00000446659 478 ntBASIC1.27□□□□□ -2.21
NPIPA3F8WFD2 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
NPIPA3F8WFD2 AL358944.1-201ENST00000528537 144 ntBASIC1.27□□□□□ -2.21
NPIPA3F8WFD2 MIR4423-201ENST00000580922 80 ntBASIC1.27□□□□□ -2.21
NPIPA3F8WFD2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.27□□□□□ -2.21
NPIPA3F8WFD2 MIR1302-2-201ENST00000607096 138 ntBASIC1.27□□□□□ -2.21
NPIPA3F8WFD2 MIR8070-201ENST00000616510 88 ntBASIC1.27□□□□□ -2.21
NPIPA3F8WFD2 AL353770.2-201ENST00000620024 78 ntBASIC1.27□□□□□ -2.21
NPIPA3F8WFD2 AC090574.1-201ENST00000623186 233 ntBASIC1.27□□□□□ -2.21
NPIPA3F8WFD2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
NPIPA3F8WFD2 MIR26B-201ENST00000362251 77 ntBASIC1.26□□□□□ -2.21
NPIPA3F8WFD2 RNU6-199P-201ENST00000362954 107 ntBASIC1.26□□□□□ -2.21
NPIPA3F8WFD2 SNORD68-201ENST00000363214 84 ntBASIC1.26□□□□□ -2.21
NPIPA3F8WFD2 RNU4-50P-201ENST00000364361 141 ntBASIC1.26□□□□□ -2.21
NPIPA3F8WFD2 MIR1287-201ENST00000408492 90 ntBASIC1.26□□□□□ -2.21
NPIPA3F8WFD2 AL390729.2-201ENST00000416137 156 ntBASIC1.26□□□□□ -2.21
NPIPA3F8WFD2 RPL30P13-201ENST00000418873 348 ntBASIC1.26□□□□□ -2.21
NPIPA3F8WFD2 RPS29P23-201ENST00000458635 123 ntBASIC1.26□□□□□ -2.21
NPIPA3F8WFD2 Y_RNA.639-201ENST00000458981 102 ntBASIC1.26□□□□□ -2.21
NPIPA3F8WFD2 RPL39P38-201ENST00000467018 153 ntBASIC1.26□□□□□ -2.21
NPIPA3F8WFD2 AC093852.1-201ENST00000503587 266 ntBASIC1.26□□□□□ -2.21
NPIPA3F8WFD2 RNU6-922P-201ENST00000516753 99 ntBASIC1.26□□□□□ -2.21
NPIPA3F8WFD2 RNU6-1116P-201ENST00000517269 99 ntBASIC1.26□□□□□ -2.21
NPIPA3F8WFD2 AC011604.1-201ENST00000545978 196 ntBASIC1.26□□□□□ -2.21
NPIPA3F8WFD2 AC008269.2-201ENST00000561915 1105 ntBASIC1.26□□□□□ -2.21
NPIPA3F8WFD2 MIR3664-201ENST00000579074 99 ntBASIC1.26□□□□□ -2.21
NPIPA3F8WFD2 AC004832.4-201ENST00000608952 331 ntBASIC1.26□□□□□ -2.21
NPIPA3F8WFD2 AL160413.1-201ENST00000622780 310 ntBASIC1.26□□□□□ -2.21
NPIPA3F8WFD2 SNORD81.1-201ENST00000363064 77 ntBASIC1.25□□□□□ -2.21
NPIPA3F8WFD2 Y_RNA.460-201ENST00000384255 102 ntBASIC1.25□□□□□ -2.21
NPIPA3F8WFD2 RNU6-855P-201ENST00000410395 104 ntBASIC1.25□□□□□ -2.21
NPIPA3F8WFD2 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.25□□□□□ -2.21
NPIPA3F8WFD2 DYNLT3P2-201ENST00000442517 295 ntBASIC1.25□□□□□ -2.21
NPIPA3F8WFD2 SNORA25.10-201ENST00000515926 124 ntBASIC1.25□□□□□ -2.21
NPIPA3F8WFD2 RNU6-475P-201ENST00000516073 104 ntBASIC1.25□□□□□ -2.21
NPIPA3F8WFD2 RN7SKP88-201ENST00000516847 250 ntBASIC1.25□□□□□ -2.21
NPIPA3F8WFD2 DEFB117-201ENST00000602356 141 ntBASIC1.25□□□□□ -2.21
NPIPA3F8WFD2 7SK.8-201ENST00000612110 250 ntBASIC1.25□□□□□ -2.21
NPIPA3F8WFD2 7SK.11-201ENST00000615477 250 ntBASIC1.25□□□□□ -2.21
NPIPA3F8WFD2 7SK.13-201ENST00000622040 250 ntBASIC1.25□□□□□ -2.21
NPIPA3F8WFD2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.25□□□□□ -2.21
NPIPA3F8WFD2 MTND4P29-201ENST00000503122 1372 ntBASIC1.24□□□□□ -2.21
NPIPA3F8WFD2 MIRLET7C-201ENST00000362160 84 ntBASIC1.24□□□□□ -2.21
NPIPA3F8WFD2 Y_RNA.61-201ENST00000362835 102 ntBASIC1.24□□□□□ -2.21
NPIPA3F8WFD2 SNORA25.9-201ENST00000365087 128 ntBASIC1.24□□□□□ -2.21
NPIPA3F8WFD2 Y_RNA.551-201ENST00000384661 102 ntBASIC1.24□□□□□ -2.21
NPIPA3F8WFD2 RNU6-21P-201ENST00000384710 107 ntBASIC1.24□□□□□ -2.21
NPIPA3F8WFD2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
NPIPA3F8WFD2 RNU6-710P-201ENST00000410424 105 ntBASIC1.24□□□□□ -2.21
NPIPA3F8WFD2 PMCHL1-202ENST00000423102 261 ntBASIC1.24□□□□□ -2.21
NPIPA3F8WFD2 RPS20P10-201ENST00000451209 253 ntBASIC1.24□□□□□ -2.21
NPIPA3F8WFD2 Y_RNA.713-201ENST00000517013 96 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms