Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RNU6-1009P-201ENST00000390996 107 ntBASIC1.08□□□□□ -2.24
NPIPA2E9PIF3 RNA5SP482-201ENST00000391269 118 ntBASIC1.08□□□□□ -2.24
NPIPA2E9PIF3 RNU6-1199P-201ENST00000411249 104 ntBASIC1.08□□□□□ -2.24
NPIPA2E9PIF3 MRPL35P3-201ENST00000421557 364 ntBASIC1.08□□□□□ -2.24
NPIPA2E9PIF3 SNORD19B-201ENST00000459623 84 ntBASIC1.08□□□□□ -2.24
NPIPA2E9PIF3 SNORA70.12-201ENST00000516084 153 ntBASIC1.08□□□□□ -2.24
NPIPA2E9PIF3 SNORD116.3-201ENST00000517176 78 ntBASIC1.08□□□□□ -2.24
NPIPA2E9PIF3 MIR548S-201ENST00000581352 82 ntBASIC1.08□□□□□ -2.24
NPIPA2E9PIF3 MIR4801-201ENST00000582704 82 ntBASIC1.08□□□□□ -2.24
NPIPA2E9PIF3 MIR4452-201ENST00000583004 71 ntBASIC1.08□□□□□ -2.24
NPIPA2E9PIF3 AC112487.2-201ENST00000637950 304 ntBASIC1.08□□□□□ -2.24
NPIPA2E9PIF3 SNORD114-7-201ENST00000362520 77 ntBASIC1.07□□□□□ -2.24
NPIPA2E9PIF3 Y_RNA.27-201ENST00000362540 103 ntBASIC1.07□□□□□ -2.24
NPIPA2E9PIF3 Y_RNA.146-201ENST00000363549 102 ntBASIC1.07□□□□□ -2.24
NPIPA2E9PIF3 SNORD114-27-201ENST00000363766 70 ntBASIC1.07□□□□□ -2.24
NPIPA2E9PIF3 AL162725.1-201ENST00000435405 301 ntBASIC1.07□□□□□ -2.24
NPIPA2E9PIF3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.07□□□□□ -2.24
NPIPA2E9PIF3 AC104332.1-201ENST00000440471 797 ntBASIC1.07□□□□□ -2.24
NPIPA2E9PIF3 RPS4XP11-201ENST00000446897 772 ntBASIC1.07□□□□□ -2.24
NPIPA2E9PIF3 MTND5P20-201ENST00000448677 143 ntBASIC1.07□□□□□ -2.24
NPIPA2E9PIF3 FGF7P4-201ENST00000509595 295 ntBASIC1.07□□□□□ -2.24
NPIPA2E9PIF3 RNU6-917P-201ENST00000516294 104 ntBASIC1.07□□□□□ -2.24
NPIPA2E9PIF3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.07□□□□□ -2.24
NPIPA2E9PIF3 VN1R91P-201ENST00000594377 169 ntBASIC1.07□□□□□ -2.24
NPIPA2E9PIF3 AL117336.2-201ENST00000602435 335 ntBASIC1.07□□□□□ -2.24
NPIPA2E9PIF3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.07□□□□□ -2.24
NPIPA2E9PIF3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.07□□□□□ -2.24
NPIPA2E9PIF3 MIRLET7C-201ENST00000362160 84 ntBASIC1.06□□□□□ -2.24
NPIPA2E9PIF3 SNORD68-201ENST00000363214 84 ntBASIC1.06□□□□□ -2.24
NPIPA2E9PIF3 Y_RNA.116-201ENST00000363292 103 ntBASIC1.06□□□□□ -2.24
NPIPA2E9PIF3 Y_RNA.118-201ENST00000363300 101 ntBASIC1.06□□□□□ -2.24
NPIPA2E9PIF3 Y_RNA.122-201ENST00000363331 96 ntBASIC1.06□□□□□ -2.24
NPIPA2E9PIF3 Y_RNA.361-201ENST00000365515 120 ntBASIC1.06□□□□□ -2.24
NPIPA2E9PIF3 SNORA25-201ENST00000384384 134 ntBASIC1.06□□□□□ -2.24
NPIPA2E9PIF3 Y_RNA.496-201ENST00000384444 101 ntBASIC1.06□□□□□ -2.24
NPIPA2E9PIF3 Y_RNA.508-201ENST00000384502 114 ntBASIC1.06□□□□□ -2.24
NPIPA2E9PIF3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.06□□□□□ -2.24
NPIPA2E9PIF3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.06□□□□□ -2.24
NPIPA2E9PIF3 RNU6-436P-201ENST00000516171 114 ntBASIC1.06□□□□□ -2.24
NPIPA2E9PIF3 RNU6-911P-201ENST00000516523 104 ntBASIC1.06□□□□□ -2.24
NPIPA2E9PIF3 AC090821.2-201ENST00000523552 176 ntBASIC1.06□□□□□ -2.24
NPIPA2E9PIF3 AC092447.9-201ENST00000603395 144 ntBASIC1.06□□□□□ -2.24
NPIPA2E9PIF3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.06□□□□□ -2.24
NPIPA2E9PIF3 MIR4272-201ENST00000635924 64 ntBASIC1.06□□□□□ -2.24
NPIPA2E9PIF3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.06□□□□□ -2.24
NPIPA2E9PIF3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
NPIPA2E9PIF3 Y_RNA.70-201ENST00000362886 110 ntBASIC1.05□□□□□ -2.24
NPIPA2E9PIF3 Y_RNA.80-201ENST00000362996 102 ntBASIC1.05□□□□□ -2.24
NPIPA2E9PIF3 Y_RNA.263-201ENST00000364659 114 ntBASIC1.05□□□□□ -2.24
NPIPA2E9PIF3 SNORD114-22-201ENST00000365423 72 ntBASIC1.05□□□□□ -2.24
NPIPA2E9PIF3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.05□□□□□ -2.24
NPIPA2E9PIF3 RNY3P14-201ENST00000384309 102 ntBASIC1.05□□□□□ -2.24
NPIPA2E9PIF3 Y_RNA.485-201ENST00000384395 102 ntBASIC1.05□□□□□ -2.24
NPIPA2E9PIF3 MIR518E-201ENST00000385252 88 ntBASIC1.05□□□□□ -2.24
NPIPA2E9PIF3 MIR653-201ENST00000385279 96 ntBASIC1.05□□□□□ -2.24
NPIPA2E9PIF3 PIGPP3-201ENST00000425307 415 ntBASIC1.05□□□□□ -2.24
NPIPA2E9PIF3 HSPE1P13-201ENST00000451143 297 ntBASIC1.05□□□□□ -2.24
NPIPA2E9PIF3 Y_RNA.702-201ENST00000516843 96 ntBASIC1.05□□□□□ -2.24
NPIPA2E9PIF3 RNA5SP404-201ENST00000517118 132 ntBASIC1.05□□□□□ -2.24
NPIPA2E9PIF3 AC090049.2-201ENST00000550377 109 ntBASIC1.05□□□□□ -2.24
NPIPA2E9PIF3 MIR4295-201ENST00000585286 85 ntBASIC1.05□□□□□ -2.24
NPIPA2E9PIF3 AC136443.5-201ENST00000603741 370 ntBASIC1.05□□□□□ -2.24
NPIPA2E9PIF3 AL050343.2-201ENST00000607338 280 ntBASIC1.05□□□□□ -2.24
NPIPA2E9PIF3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.05□□□□□ -2.24
NPIPA2E9PIF3 MIR96-201ENST00000362288 78 ntBASIC1.04□□□□□ -2.24
NPIPA2E9PIF3 RNU6-163P-201ENST00000384396 106 ntBASIC1.04□□□□□ -2.24
NPIPA2E9PIF3 SNORD41-201ENST00000386967 70 ntBASIC1.04□□□□□ -2.24
NPIPA2E9PIF3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
NPIPA2E9PIF3 AL451046.2-201ENST00000403074 277 ntBASIC1.04□□□□□ -2.24
NPIPA2E9PIF3 RNU2-61P-201ENST00000411069 191 ntBASIC1.04□□□□□ -2.24
NPIPA2E9PIF3 AC236972.2-201ENST00000434979 310 ntBASIC1.04□□□□□ -2.24
NPIPA2E9PIF3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.04□□□□□ -2.24
NPIPA2E9PIF3 RNU7-152P-201ENST00000458982 64 ntBASIC1.04□□□□□ -2.24
NPIPA2E9PIF3 AC087343.1-201ENST00000477341 475 ntBASIC1.04□□□□□ -2.24
NPIPA2E9PIF3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.04□□□□□ -2.24
NPIPA2E9PIF3 SNORD116-28-201ENST00000516123 91 ntBASIC1.04□□□□□ -2.24
NPIPA2E9PIF3 AL358944.1-201ENST00000528537 144 ntBASIC1.04□□□□□ -2.24
NPIPA2E9PIF3 AC011604.1-201ENST00000545978 196 ntBASIC1.04□□□□□ -2.24
NPIPA2E9PIF3 AL022345.2-201ENST00000606307 135 ntBASIC1.04□□□□□ -2.24
NPIPA2E9PIF3 BX284668.6-201ENST00000606899 438 ntBASIC1.04□□□□□ -2.24
NPIPA2E9PIF3 AL591926.4-201ENST00000616895 298 ntBASIC1.04□□□□□ -2.24
NPIPA2E9PIF3 AC027335.2-201ENST00000624030 375 ntBASIC1.04□□□□□ -2.24
NPIPA2E9PIF3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
NPIPA2E9PIF3 RNU6-1115P-201ENST00000362490 106 ntBASIC1.03□□□□□ -2.24
NPIPA2E9PIF3 RNU6-1175P-201ENST00000365200 107 ntBASIC1.03□□□□□ -2.24
NPIPA2E9PIF3 Y_RNA.329-201ENST00000365209 107 ntBASIC1.03□□□□□ -2.24
NPIPA2E9PIF3 SNORA2.2-201ENST00000365473 135 ntBASIC1.03□□□□□ -2.24
NPIPA2E9PIF3 SNORA22-201ENST00000383907 134 ntBASIC1.03□□□□□ -2.24
NPIPA2E9PIF3 SNORA22C-201ENST00000384614 134 ntBASIC1.03□□□□□ -2.24
NPIPA2E9PIF3 MTND1P14-201ENST00000427400 950 ntBASIC1.03□□□□□ -2.24
NPIPA2E9PIF3 AC048334.1-201ENST00000477975 159 ntBASIC1.03□□□□□ -2.24
NPIPA2E9PIF3 SNORA25.10-201ENST00000515926 124 ntBASIC1.03□□□□□ -2.24
NPIPA2E9PIF3 RNU6-322P-201ENST00000516010 103 ntBASIC1.03□□□□□ -2.24
NPIPA2E9PIF3 MIR5188-201ENST00000583467 113 ntBASIC1.03□□□□□ -2.24
NPIPA2E9PIF3 FAM106DP-201ENST00000586416 501 ntBASIC1.03□□□□□ -2.24
NPIPA2E9PIF3 AL078603.1-201ENST00000603824 313 ntBASIC1.03□□□□□ -2.24
NPIPA2E9PIF3 AC022441.3-201ENST00000605737 136 ntBASIC1.03□□□□□ -2.24
NPIPA2E9PIF3 Y_RNA.804-201ENST00000615262 101 ntBASIC1.03□□□□□ -2.24
NPIPA2E9PIF3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
NPIPA2E9PIF3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 224.8 ms