Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RNU6-1116P-201ENST00000517269 99 ntBASIC1.18□□□□□ -2.22
TRIM49D1C9J1S8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.18□□□□□ -2.22
TRIM49D1C9J1S8 RPS29P30-201ENST00000600975 111 ntBASIC1.18□□□□□ -2.22
TRIM49D1C9J1S8 AL359821.1-201ENST00000605519 182 ntBASIC1.18□□□□□ -2.22
TRIM49D1C9J1S8 AC004832.4-201ENST00000608952 331 ntBASIC1.18□□□□□ -2.22
TRIM49D1C9J1S8 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.18□□□□□ -2.22
TRIM49D1C9J1S8 MIR376A1-201ENST00000616574 68 ntBASIC1.18□□□□□ -2.22
TRIM49D1C9J1S8 RNU6-1019P-201ENST00000364424 107 ntBASIC1.17□□□□□ -2.22
TRIM49D1C9J1S8 Y_RNA.439-201ENST00000384119 94 ntBASIC1.17□□□□□ -2.22
TRIM49D1C9J1S8 MIR873-201ENST00000401120 77 ntBASIC1.17□□□□□ -2.22
TRIM49D1C9J1S8 RNU6-101P-201ENST00000410323 104 ntBASIC1.17□□□□□ -2.22
TRIM49D1C9J1S8 RNU6-321P-201ENST00000410912 106 ntBASIC1.17□□□□□ -2.22
TRIM49D1C9J1S8 RNU2-61P-201ENST00000411069 191 ntBASIC1.17□□□□□ -2.22
TRIM49D1C9J1S8 AC004965.1-201ENST00000413033 213 ntBASIC1.17□□□□□ -2.22
TRIM49D1C9J1S8 MTCO3P19-201ENST00000415864 321 ntBASIC1.17□□□□□ -2.22
TRIM49D1C9J1S8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.17□□□□□ -2.22
TRIM49D1C9J1S8 AC074290.1-201ENST00000448883 135 ntBASIC1.17□□□□□ -2.22
TRIM49D1C9J1S8 RNU6-570P-201ENST00000517051 105 ntBASIC1.17□□□□□ -2.22
TRIM49D1C9J1S8 RPL21P9-201ENST00000556149 474 ntBASIC1.17□□□□□ -2.22
TRIM49D1C9J1S8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.17□□□□□ -2.22
TRIM49D1C9J1S8 AL360085.1-201ENST00000604713 532 ntBASIC1.17□□□□□ -2.22
TRIM49D1C9J1S8 PRR13P7-201ENST00000605538 430 ntBASIC1.17□□□□□ -2.22
TRIM49D1C9J1S8 AC007742.2-201ENST00000618226 398 ntBASIC1.17□□□□□ -2.22
TRIM49D1C9J1S8 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.17□□□□□ -2.22
TRIM49D1C9J1S8 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TRIM49D1C9J1S8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 Y_RNA.4-201ENST00000362333 112 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 Y_RNA.19-201ENST00000362462 99 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 SNORA1B-201ENST00000362535 133 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 RNU6-1266P-201ENST00000362794 105 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 RNU4-50P-201ENST00000364361 141 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 Y_RNA.267-201ENST00000364679 109 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 RNU6-1080P-201ENST00000383982 107 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 SNORD26-201ENST00000384147 75 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 MIR606-201ENST00000384851 96 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 RNU6-985P-201ENST00000410182 104 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 AL591704.2-201ENST00000421658 181 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 AC245047.3-201ENST00000429428 127 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 RPS4XP11-201ENST00000446897 772 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 RNU7-34P-201ENST00000459394 64 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 AC005840.1-201ENST00000498412 377 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 AC025465.3-201ENST00000510570 311 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 RNU6-496P-201ENST00000516145 99 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 RNY3P15-201ENST00000516297 97 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 AC022616.4-201ENST00000522985 181 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 AC091178.2-201ENST00000584401 117 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 AL353621.2-201ENST00000605340 133 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 AC021506.2-201ENST00000612354 169 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 AL359075.3-201ENST00000613288 217 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 MIR8054-201ENST00000620877 86 ntBASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TRIM49D1C9J1S8 AC100821.1-201ENST00000523153 2479 ntBASIC1.15□□□□□ -2.22
TRIM49D1C9J1S8 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.15□□□□□ -2.22
TRIM49D1C9J1S8 AL391987.6-201ENST00000305671 199 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 RNU5F-3P-201ENST00000363767 117 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.202-201ENST00000364083 110 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-376P-201ENST00000384731 106 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 MIR520A-201ENST00000384862 85 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 MT-TW-201ENST00000387382 68 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 SNORD115-46-201ENST00000390982 71 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 MIR548F4-201ENST00000408515 105 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 RNU2-7P-201ENST00000410794 178 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 RPL30P13-201ENST00000418873 348 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 DYNLT3P2-201ENST00000442517 295 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 STAG3L5P-204ENST00000443759 179 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 AC093852.1-201ENST00000503587 266 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 RNU7-99P-201ENST00000516271 62 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 RNU1-142P-201ENST00000516682 145 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.721-201ENST00000517207 102 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 AL137100.2-201ENST00000555786 315 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 SNORA77B-201ENST00000578179 125 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.772-201ENST00000606692 102 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 AC011373.1-201ENST00000607270 237 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 MIR6079-201ENST00000635807 62 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 AC134026.1-201ENST00000623249 2239 ntBASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
TRIM49D1C9J1S8 AC018630.2-201ENST00000534866 2403 ntBASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-238P-201ENST00000363313 106 ntBASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.383-201ENST00000383855 97 ntBASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-639P-201ENST00000384074 107 ntBASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.483-201ENST00000384380 101 ntBASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 SNORA26.5-201ENST00000391215 123 ntBASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 MIR1278-201ENST00000408753 81 ntBASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-651P-201ENST00000411040 105 ntBASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 MTND2P23-201ENST00000422990 651 ntBASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 CALM2P4-201ENST00000430810 426 ntBASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 HSPE1P13-201ENST00000451143 297 ntBASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.713-201ENST00000517013 96 ntBASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-1096P-201ENST00000517089 102 ntBASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 AC019176.1-201ENST00000518519 225 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms