Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RNU6-1019P-201ENST00000364424 107 ntBASIC2.59□□□□□ -1.99
CCDC163A0A0D9SF12 Y_RNA.270-201ENST00000364693 104 ntBASIC2.59□□□□□ -1.99
CCDC163A0A0D9SF12 RNU6-918P-201ENST00000391219 106 ntBASIC2.59□□□□□ -1.99
CCDC163A0A0D9SF12 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CCDC163A0A0D9SF12 MLLT10P1-201ENST00000418346 262 ntBASIC2.59□□□□□ -1.99
CCDC163A0A0D9SF12 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC163A0A0D9SF12 AC245047.8-201ENST00000456455 284 ntBASIC2.59□□□□□ -1.99
CCDC163A0A0D9SF12 RNU7-94P-201ENST00000459576 63 ntBASIC2.59□□□□□ -1.99
CCDC163A0A0D9SF12 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC163A0A0D9SF12 RNA5SP320-201ENST00000516263 124 ntBASIC2.59□□□□□ -1.99
CCDC163A0A0D9SF12 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC163A0A0D9SF12 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC163A0A0D9SF12 AC091178.2-201ENST00000584401 117 ntBASIC2.59□□□□□ -1.99
CCDC163A0A0D9SF12 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC163A0A0D9SF12 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CCDC163A0A0D9SF12 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -2
CCDC163A0A0D9SF12 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CCDC163A0A0D9SF12 Y_RNA.7-201ENST00000362352 102 ntBASIC2.58□□□□□ -2
CCDC163A0A0D9SF12 Y_RNA.203-201ENST00000364106 102 ntBASIC2.58□□□□□ -2
CCDC163A0A0D9SF12 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.58□□□□□ -2
CCDC163A0A0D9SF12 RNU2-64P-201ENST00000411315 191 ntBASIC2.58□□□□□ -2
CCDC163A0A0D9SF12 AC245047.3-201ENST00000429428 127 ntBASIC2.58□□□□□ -2
CCDC163A0A0D9SF12 RNU6-1007P-201ENST00000516586 107 ntBASIC2.58□□□□□ -2
CCDC163A0A0D9SF12 RNU6-861P-201ENST00000516745 106 ntBASIC2.58□□□□□ -2
CCDC163A0A0D9SF12 RNU2-56P-201ENST00000516826 190 ntBASIC2.58□□□□□ -2
CCDC163A0A0D9SF12 RNU6-341P-201ENST00000516973 96 ntBASIC2.58□□□□□ -2
CCDC163A0A0D9SF12 AC121758.2-201ENST00000553271 193 ntBASIC2.58□□□□□ -2
CCDC163A0A0D9SF12 DEFB122-202ENST00000569013 197 ntBASIC2.58□□□□□ -2
CCDC163A0A0D9SF12 MIR4287-201ENST00000579398 78 ntBASIC2.58□□□□□ -2
CCDC163A0A0D9SF12 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CCDC163A0A0D9SF12 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CCDC163A0A0D9SF12 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CCDC163A0A0D9SF12 ICE2P2-201ENST00000483823 2787 ntBASIC2.57□□□□□ -2
CCDC163A0A0D9SF12 AC100821.1-201ENST00000523153 2479 ntBASIC2.57□□□□□ -2
CCDC163A0A0D9SF12 snoU2_19.4-201ENST00000364329 80 ntBASIC2.57□□□□□ -2
CCDC163A0A0D9SF12 Y_RNA.238-201ENST00000364441 102 ntBASIC2.57□□□□□ -2
CCDC163A0A0D9SF12 MIR144-201ENST00000384886 86 ntBASIC2.57□□□□□ -2
CCDC163A0A0D9SF12 MIR526A2-201ENST00000390198 65 ntBASIC2.57□□□□□ -2
CCDC163A0A0D9SF12 RN7SKP223-201ENST00000410582 62 ntBASIC2.57□□□□□ -2
CCDC163A0A0D9SF12 AL606517.2-201ENST00000442855 241 ntBASIC2.57□□□□□ -2
CCDC163A0A0D9SF12 RNA5SP57-201ENST00000459463 123 ntBASIC2.57□□□□□ -2
CCDC163A0A0D9SF12 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.57□□□□□ -2
CCDC163A0A0D9SF12 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC163A0A0D9SF12 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC163A0A0D9SF12 RNA5SP289-201ENST00000362332 137 ntBASIC2.56□□□□□ -2
CCDC163A0A0D9SF12 Y_RNA.182-201ENST00000363880 111 ntBASIC2.56□□□□□ -2
CCDC163A0A0D9SF12 SNORA16B-201ENST00000364674 135 ntBASIC2.56□□□□□ -2
CCDC163A0A0D9SF12 RNU1-51P-201ENST00000365345 176 ntBASIC2.56□□□□□ -2
CCDC163A0A0D9SF12 Y_RNA.571-201ENST00000384753 98 ntBASIC2.56□□□□□ -2
CCDC163A0A0D9SF12 MT-TT-201ENST00000387460 66 ntBASIC2.56□□□□□ -2
CCDC163A0A0D9SF12 AL049830.1-201ENST00000468034 425 ntBASIC2.56□□□□□ -2
CCDC163A0A0D9SF12 RPS26P45-201ENST00000471748 340 ntBASIC2.56□□□□□ -2
CCDC163A0A0D9SF12 Y_RNA.797-201ENST00000515977 94 ntBASIC2.56□□□□□ -2
CCDC163A0A0D9SF12 RNU6-453P-201ENST00000516819 85 ntBASIC2.56□□□□□ -2
CCDC163A0A0D9SF12 IGLV3-17-201ENST00000519099 244 ntBASIC2.56□□□□□ -2
CCDC163A0A0D9SF12 RPL23AP91-201ENST00000569211 455 ntBASIC2.56□□□□□ -2
CCDC163A0A0D9SF12 MIR4635-201ENST00000583759 79 ntBASIC2.56□□□□□ -2
CCDC163A0A0D9SF12 JPX_2.1-201ENST00000614161 69 ntBASIC2.56□□□□□ -2
CCDC163A0A0D9SF12 U1.36-201ENST00000620684 176 ntBASIC2.56□□□□□ -2
CCDC163A0A0D9SF12 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.56□□□□□ -2
CCDC163A0A0D9SF12 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.56□□□□□ -2
CCDC163A0A0D9SF12 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CCDC163A0A0D9SF12 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC163A0A0D9SF12 RNA5SP276-201ENST00000362580 94 ntBASIC2.55□□□□□ -2
CCDC163A0A0D9SF12 Y_RNA.229-201ENST00000364347 113 ntBASIC2.55□□□□□ -2
CCDC163A0A0D9SF12 Y_RNA.233-201ENST00000364407 101 ntBASIC2.55□□□□□ -2
CCDC163A0A0D9SF12 MIR562-201ENST00000384894 95 ntBASIC2.55□□□□□ -2
CCDC163A0A0D9SF12 SNORA48.1-201ENST00000390879 135 ntBASIC2.55□□□□□ -2
CCDC163A0A0D9SF12 RNA5SP210-201ENST00000391034 120 ntBASIC2.55□□□□□ -2
CCDC163A0A0D9SF12 AL359511.1-201ENST00000402970 211 ntBASIC2.55□□□□□ -2
CCDC163A0A0D9SF12 AL512604.1-201ENST00000404812 257 ntBASIC2.55□□□□□ -2
CCDC163A0A0D9SF12 RN7SKP51-201ENST00000410781 304 ntBASIC2.55□□□□□ -2
CCDC163A0A0D9SF12 RNA5SP450-201ENST00000411206 102 ntBASIC2.55□□□□□ -2
CCDC163A0A0D9SF12 AL451074.5-201ENST00000415894 435 ntBASIC2.55□□□□□ -2
CCDC163A0A0D9SF12 MIR1273D-201ENST00000577266 86 ntBASIC2.55□□□□□ -2
CCDC163A0A0D9SF12 AC022217.4-201ENST00000604389 163 ntBASIC2.55□□□□□ -2
CCDC163A0A0D9SF12 AC072026.1-201ENST00000605023 201 ntBASIC2.55□□□□□ -2
CCDC163A0A0D9SF12 AC098479.1-201ENST00000609225 154 ntBASIC2.55□□□□□ -2
CCDC163A0A0D9SF12 MIR6840-201ENST00000611937 71 ntBASIC2.55□□□□□ -2
CCDC163A0A0D9SF12 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC163A0A0D9SF12 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 SNORA1B-201ENST00000362535 133 ntBASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 Y_RNA.265-201ENST00000364677 108 ntBASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 MIR17-201ENST00000385012 84 ntBASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 Y_RNA.587-201ENST00000391210 103 ntBASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 RNU6-381P-201ENST00000391259 108 ntBASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 AC245047.4-201ENST00000433189 144 ntBASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 AC023449.1-201ENST00000454464 154 ntBASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 RNU7-120P-201ENST00000459334 63 ntBASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 RN7SL297P-201ENST00000483161 293 ntBASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 RN7SKP164-201ENST00000516138 266 ntBASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 MIR2681-201ENST00000581814 105 ntBASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 AL049861.1-201ENST00000603130 150 ntBASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 MIR6733-201ENST00000635723 61 ntBASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms