Protein–RNA interactions for Protein: A0A0C4DH55

IGKV3D-7, Immunoglobulin kappa variable 3D-7, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-7A0A0C4DH55 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
IGKV3D-7A0A0C4DH55 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 MIR18A-201ENST00000362310 71 ntBASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU6-1301P-201ENST00000362724 104 ntBASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 Y_RNA.368-201ENST00000365547 113 ntBASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 SNORD116-1-201ENST00000384335 95 ntBASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 SNORD12B-201ENST00000410433 91 ntBASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNA5SP475-201ENST00000410568 110 ntBASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU6-1199P-201ENST00000411249 104 ntBASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 SNORD83.1-201ENST00000411362 77 ntBASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU6-408P-201ENST00000515910 100 ntBASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU6-120P-201ENST00000516077 103 ntBASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU7-43P-201ENST00000516554 64 ntBASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 MIR548AO-201ENST00000579992 96 ntBASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 NBR2-204ENST00000587322 63 ntBASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AC060780.3-201ENST00000589464 80 ntBASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AC243829.3-201ENST00000622177 108 ntBASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.14□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNA5SP48-201ENST00000363969 126 ntBASIC0.13□□□□□ -2.39
IGKV3D-7A0A0C4DH55 Y_RNA.404-201ENST00000383978 102 ntBASIC0.13□□□□□ -2.39
IGKV3D-7A0A0C4DH55 Y_RNA.554-201ENST00000384672 102 ntBASIC0.13□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AL031003.1-201ENST00000404229 172 ntBASIC0.13□□□□□ -2.39
IGKV3D-7A0A0C4DH55 Y_RNA.594-201ENST00000410373 140 ntBASIC0.13□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU6-613P-201ENST00000410412 108 ntBASIC0.13□□□□□ -2.39
IGKV3D-7A0A0C4DH55 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.13□□□□□ -2.39
IGKV3D-7A0A0C4DH55 MTND5P5-201ENST00000503764 376 ntBASIC0.13□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.13□□□□□ -2.39
IGKV3D-7A0A0C4DH55 Y_RNA.688-201ENST00000516565 95 ntBASIC0.13□□□□□ -2.39
IGKV3D-7A0A0C4DH55 MIR3684-201ENST00000579779 74 ntBASIC0.13□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AC018462.2-201ENST00000605375 395 ntBASIC0.13□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AC103591.3-201ENST00000608684 209 ntBASIC0.13□□□□□ -2.39
IGKV3D-7A0A0C4DH55 MIR1244-1-201ENST00000612829 85 ntBASIC0.13□□□□□ -2.39
IGKV3D-7A0A0C4DH55 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.13□□□□□ -2.39
IGKV3D-7A0A0C4DH55 MIR1244-3-201ENST00000635744 85 ntBASIC0.13□□□□□ -2.39
IGKV3D-7A0A0C4DH55 MIR1244-2-201ENST00000636449 85 ntBASIC0.13□□□□□ -2.39
IGKV3D-7A0A0C4DH55 MIR1244-4-202ENST00000636813 85 ntBASIC0.13□□□□□ -2.39
IGKV3D-7A0A0C4DH55 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AC090625.1-201ENST00000357130 210 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 MIR1-1-201ENST00000362147 71 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU6-926P-201ENST00000384075 107 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU6-1105P-201ENST00000384774 107 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 MIR520H-201ENST00000385126 88 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU2-16P-201ENST00000410712 136 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU2-61P-201ENST00000411069 191 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 SNRPGP14-201ENST00000435400 219 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AC067940.1-201ENST00000458411 300 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RPS29P1-201ENST00000465274 159 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 HMGN1P10-201ENST00000474557 553 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RPL7P42-201ENST00000481005 679 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 Y_RNA.682-201ENST00000516457 100 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU11-2P-201ENST00000516898 142 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AC093027.1-201ENST00000546698 429 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AL355375.2-201ENST00000574825 175 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 MIR5000-201ENST00000577717 103 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 MIR3612-201ENST00000579753 87 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 MIR4431-201ENST00000579990 94 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AL512605.2-201ENST00000592972 256 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AC104695.3-201ENST00000604052 296 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 LARP7P1-201ENST00000605576 316 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AC020891.4-201ENST00000605745 93 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AC245008.1-201ENST00000608123 476 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 MIR3662-201ENST00000637030 95 ntBASIC0.12□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU6-1084P-201ENST00000362498 107 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 SNORD114-7-201ENST00000362520 77 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 SNORD44.1-201ENST00000363202 61 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 Y_RNA.168-201ENST00000363740 102 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNA5SP517-201ENST00000364724 117 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU6-767P-201ENST00000384132 107 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU6-1042P-201ENST00000384204 107 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU6-125P-201ENST00000384505 107 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU6-205P-201ENST00000390858 107 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AC090844.1-201ENST00000422019 156 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 BTF3P11-201ENST00000426582 477 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 MTND1P4-201ENST00000435196 415 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 MTND1P29-201ENST00000448112 647 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RPS29P25-201ENST00000481709 171 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU4-49P-201ENST00000516080 140 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU6-314P-201ENST00000516574 104 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU1-54P-201ENST00000517181 120 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 MIR4790-201ENST00000577799 79 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AL162730.1-201ENST00000605734 292 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AL355073.2-201ENST00000612106 557 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 AC240442.1-201ENST00000616055 283 ntBASIC0.11□□□□□ -2.39
IGKV3D-7A0A0C4DH55 Y_RNA.2-201ENST00000362330 96 ntBASIC0.1□□□□□ -2.39
IGKV3D-7A0A0C4DH55 Y_RNA.191-201ENST00000363972 113 ntBASIC0.1□□□□□ -2.39
IGKV3D-7A0A0C4DH55 RNU6-580P-201ENST00000365159 107 ntBASIC0.1□□□□□ -2.39
IGKV3D-7A0A0C4DH55 SNORD114-22-201ENST00000365423 72 ntBASIC0.1□□□□□ -2.39
IGKV3D-7A0A0C4DH55 VTRNA1-3-201ENST00000365645 89 ntBASIC0.1□□□□□ -2.39
IGKV3D-7A0A0C4DH55 MIR520F-201ENST00000384824 87 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms