Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
TRAV25A0A0B4J276 SNORD45.4-201ENST00000516629 73 ntBASIC0.24□□□□□ -2.37
TRAV25A0A0B4J276 MIR2115-201ENST00000516657 100 ntBASIC0.24□□□□□ -2.37
TRAV25A0A0B4J276 Y_RNA.714-201ENST00000517065 90 ntBASIC0.24□□□□□ -2.37
TRAV25A0A0B4J276 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
TRAV25A0A0B4J276 RNU6-613P-201ENST00000410412 108 ntBASIC0.23□□□□□ -2.37
TRAV25A0A0B4J276 MLLT10P1-201ENST00000418346 262 ntBASIC0.23□□□□□ -2.37
TRAV25A0A0B4J276 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV25A0A0B4J276 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV25A0A0B4J276 AC019235.1-201ENST00000503847 207 ntBASIC0.23□□□□□ -2.37
TRAV25A0A0B4J276 RNA5SP436-201ENST00000516020 115 ntBASIC0.23□□□□□ -2.37
TRAV25A0A0B4J276 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV25A0A0B4J276 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.23□□□□□ -2.37
TRAV25A0A0B4J276 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV25A0A0B4J276 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.23□□□□□ -2.37
TRAV25A0A0B4J276 MIR3974-201ENST00000637126 96 ntBASIC0.23□□□□□ -2.37
TRAV25A0A0B4J276 RNY3P3-201ENST00000363816 102 ntBASIC0.22□□□□□ -2.37
TRAV25A0A0B4J276 RNU6-654P-201ENST00000364373 107 ntBASIC0.22□□□□□ -2.37
TRAV25A0A0B4J276 MIR573-201ENST00000384964 99 ntBASIC0.22□□□□□ -2.37
TRAV25A0A0B4J276 RNU6-332P-201ENST00000391193 108 ntBASIC0.22□□□□□ -2.37
TRAV25A0A0B4J276 AL390729.2-201ENST00000416137 156 ntBASIC0.22□□□□□ -2.37
TRAV25A0A0B4J276 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.22□□□□□ -2.37
TRAV25A0A0B4J276 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.22□□□□□ -2.37
TRAV25A0A0B4J276 AC105313.1-201ENST00000509121 353 ntBASIC0.22□□□□□ -2.37
TRAV25A0A0B4J276 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.22□□□□□ -2.37
TRAV25A0A0B4J276 AC063944.3-201ENST00000609969 533 ntBASIC0.22□□□□□ -2.37
TRAV25A0A0B4J276 AC015726.2-201ENST00000620112 122 ntBASIC0.22□□□□□ -2.37
TRAV25A0A0B4J276 AC091925.1-201ENST00000623204 462 ntBASIC0.22□□□□□ -2.37
TRAV25A0A0B4J276 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.22□□□□□ -2.37
TRAV25A0A0B4J276 AC010487.4-201ENST00000637027 61 ntBASIC0.22□□□□□ -2.37
TRAV25A0A0B4J276 MIR522-201ENST00000385071 87 ntBASIC0.21□□□□□ -2.38
TRAV25A0A0B4J276 MIR613-201ENST00000385248 95 ntBASIC0.21□□□□□ -2.38
TRAV25A0A0B4J276 RNU2-66P-201ENST00000410650 161 ntBASIC0.21□□□□□ -2.38
TRAV25A0A0B4J276 MTND1P26-201ENST00000440488 538 ntBASIC0.21□□□□□ -2.38
TRAV25A0A0B4J276 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.21□□□□□ -2.38
TRAV25A0A0B4J276 RNU6-1337P-201ENST00000516525 95 ntBASIC0.21□□□□□ -2.38
TRAV25A0A0B4J276 Y_RNA.704-201ENST00000516851 102 ntBASIC0.21□□□□□ -2.38
TRAV25A0A0B4J276 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
TRAV25A0A0B4J276 RNU6-451P-201ENST00000362921 107 ntBASIC0.2□□□□□ -2.38
TRAV25A0A0B4J276 Y_RNA.168-201ENST00000363740 102 ntBASIC0.2□□□□□ -2.38
TRAV25A0A0B4J276 Y_RNA.253-201ENST00000364562 112 ntBASIC0.2□□□□□ -2.38
TRAV25A0A0B4J276 Y_RNA.393-201ENST00000383936 102 ntBASIC0.2□□□□□ -2.38
TRAV25A0A0B4J276 RNU6-1013P-201ENST00000384180 107 ntBASIC0.2□□□□□ -2.38
TRAV25A0A0B4J276 MIR489-201ENST00000384923 84 ntBASIC0.2□□□□□ -2.38
TRAV25A0A0B4J276 RNU6-373P-201ENST00000411247 98 ntBASIC0.2□□□□□ -2.38
TRAV25A0A0B4J276 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.2□□□□□ -2.38
TRAV25A0A0B4J276 SNORA40.9-201ENST00000515895 93 ntBASIC0.2□□□□□ -2.38
TRAV25A0A0B4J276 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.2□□□□□ -2.38
TRAV25A0A0B4J276 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
TRAV25A0A0B4J276 RN7SL793P-201ENST00000583259 296 ntBASIC0.2□□□□□ -2.38
TRAV25A0A0B4J276 PVT1_3.1-201ENST00000620853 95 ntBASIC0.2□□□□□ -2.38
TRAV25A0A0B4J276 RNU6-349P-201ENST00000362402 107 ntBASIC0.19□□□□□ -2.38
TRAV25A0A0B4J276 Y_RNA.48-201ENST00000362710 103 ntBASIC0.19□□□□□ -2.38
TRAV25A0A0B4J276 Y_RNA.112-201ENST00000363250 102 ntBASIC0.19□□□□□ -2.38
TRAV25A0A0B4J276 RNU6-131P-201ENST00000391144 107 ntBASIC0.19□□□□□ -2.38
TRAV25A0A0B4J276 MIR1302-7-201ENST00000408841 72 ntBASIC0.19□□□□□ -2.38
TRAV25A0A0B4J276 USP9YP30-201ENST00000430729 455 ntBASIC0.19□□□□□ -2.38
TRAV25A0A0B4J276 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV25A0A0B4J276 AC010486.3-201ENST00000511602 785 ntBASIC0.19□□□□□ -2.38
TRAV25A0A0B4J276 MIR5701-3-201ENST00000578890 82 ntBASIC0.19□□□□□ -2.38
TRAV25A0A0B4J276 MIR5701-1-201ENST00000585138 82 ntBASIC0.19□□□□□ -2.38
TRAV25A0A0B4J276 AC011712.1-201ENST00000588959 234 ntBASIC0.19□□□□□ -2.38
TRAV25A0A0B4J276 MIR5701-2-201ENST00000615634 82 ntBASIC0.19□□□□□ -2.38
TRAV25A0A0B4J276 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV25A0A0B4J276 RNU6-1059P-201ENST00000363752 98 ntBASIC0.18□□□□□ -2.38
TRAV25A0A0B4J276 RNU6-396P-201ENST00000365369 105 ntBASIC0.18□□□□□ -2.38
TRAV25A0A0B4J276 Y_RNA.361-201ENST00000365515 120 ntBASIC0.18□□□□□ -2.38
TRAV25A0A0B4J276 Y_RNA.376-201ENST00000365638 108 ntBASIC0.18□□□□□ -2.38
TRAV25A0A0B4J276 Y_RNA.557-201ENST00000384680 107 ntBASIC0.18□□□□□ -2.38
TRAV25A0A0B4J276 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.18□□□□□ -2.38
TRAV25A0A0B4J276 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.18□□□□□ -2.38
TRAV25A0A0B4J276 SNORD5.1-201ENST00000458800 75 ntBASIC0.18□□□□□ -2.38
TRAV25A0A0B4J276 RNU6-273P-201ENST00000516937 96 ntBASIC0.18□□□□□ -2.38
TRAV25A0A0B4J276 MIR3942-201ENST00000585264 109 ntBASIC0.18□□□□□ -2.38
TRAV25A0A0B4J276 Z99129.1-201ENST00000612510 255 ntBASIC0.18□□□□□ -2.38
TRAV25A0A0B4J276 MIR6128-201ENST00000615528 109 ntBASIC0.18□□□□□ -2.38
TRAV25A0A0B4J276 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.18□□□□□ -2.38
TRAV25A0A0B4J276 RNY1P16-201ENST00000363063 111 ntBASIC0.17□□□□□ -2.38
TRAV25A0A0B4J276 RNU6-780P-201ENST00000391030 104 ntBASIC0.17□□□□□ -2.38
TRAV25A0A0B4J276 RNA5SP95-201ENST00000410319 137 ntBASIC0.17□□□□□ -2.38
TRAV25A0A0B4J276 AC009161.1-201ENST00000417306 376 ntBASIC0.17□□□□□ -2.38
TRAV25A0A0B4J276 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.17□□□□□ -2.38
TRAV25A0A0B4J276 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.17□□□□□ -2.38
TRAV25A0A0B4J276 RNU6-864P-201ENST00000516256 108 ntBASIC0.17□□□□□ -2.38
TRAV25A0A0B4J276 AC006380.1-201ENST00000603598 186 ntBASIC0.17□□□□□ -2.38
TRAV25A0A0B4J276 AL162730.1-201ENST00000605734 292 ntBASIC0.17□□□□□ -2.38
TRAV25A0A0B4J276 AC092634.7-201ENST00000621022 103 ntBASIC0.17□□□□□ -2.38
TRAV25A0A0B4J276 AP000770.2-201ENST00000623694 100 ntBASIC0.17□□□□□ -2.38
TRAV25A0A0B4J276 MIR3662-201ENST00000637030 95 ntBASIC0.17□□□□□ -2.38
TRAV25A0A0B4J276 MIR1321-201ENST00000637766 79 ntBASIC0.17□□□□□ -2.38
TRAV25A0A0B4J276 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.17□□□□□ -2.38
TRAV25A0A0B4J276 MIR18A-201ENST00000362310 71 ntBASIC0.16□□□□□ -2.38
TRAV25A0A0B4J276 RNU6-842P-201ENST00000384269 107 ntBASIC0.16□□□□□ -2.38
TRAV25A0A0B4J276 MIR520H-201ENST00000385126 88 ntBASIC0.16□□□□□ -2.38
TRAV25A0A0B4J276 AL139396.1-201ENST00000421137 167 ntBASIC0.16□□□□□ -2.38
TRAV25A0A0B4J276 AC108740.1-201ENST00000498629 225 ntBASIC0.16□□□□□ -2.38
TRAV25A0A0B4J276 RNU6-977P-201ENST00000516411 103 ntBASIC0.16□□□□□ -2.38
TRAV25A0A0B4J276 AC105029.1-201ENST00000520250 669 ntBASIC0.16□□□□□ -2.38
TRAV25A0A0B4J276 AL355375.2-201ENST00000574825 175 ntBASIC0.16□□□□□ -2.38
TRAV25A0A0B4J276 AC012433.1-201ENST00000588916 398 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms