Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 MTCO2P8-201ENST00000412213 658 ntBASIC-0.48□□□□□ -2.49
TRAV4A0A0B4J268 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.48□□□□□ -2.49
TRAV4A0A0B4J268 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.48□□□□□ -2.49
TRAV4A0A0B4J268 SNORD4A-201ENST00000459174 72 ntBASIC-0.48□□□□□ -2.49
TRAV4A0A0B4J268 RNU7-159P-201ENST00000459284 62 ntBASIC-0.48□□□□□ -2.49
TRAV4A0A0B4J268 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.48□□□□□ -2.49
TRAV4A0A0B4J268 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.48□□□□□ -2.49
TRAV4A0A0B4J268 AC026371.1-201ENST00000551867 419 ntBASIC-0.48□□□□□ -2.49
TRAV4A0A0B4J268 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.48□□□□□ -2.49
TRAV4A0A0B4J268 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.48□□□□□ -2.49
TRAV4A0A0B4J268 AC005176.2-201ENST00000596933 147 ntBASIC-0.48□□□□□ -2.49
TRAV4A0A0B4J268 AC005828.6-201ENST00000606610 232 ntBASIC-0.48□□□□□ -2.49
TRAV4A0A0B4J268 AL354950.2-201ENST00000617939 290 ntBASIC-0.48□□□□□ -2.49
TRAV4A0A0B4J268 AC073534.2-201ENST00000620377 381 ntBASIC-0.48□□□□□ -2.49
TRAV4A0A0B4J268 RNU6-1214P-201ENST00000363650 109 ntBASIC-0.49□□□□□ -2.49
TRAV4A0A0B4J268 RNU6-281P-201ENST00000384212 103 ntBASIC-0.49□□□□□ -2.49
TRAV4A0A0B4J268 SNORD38C-201ENST00000384381 69 ntBASIC-0.49□□□□□ -2.49
TRAV4A0A0B4J268 MIR125B2-201ENST00000385128 89 ntBASIC-0.49□□□□□ -2.49
TRAV4A0A0B4J268 MIR620-201ENST00000385232 95 ntBASIC-0.49□□□□□ -2.49
TRAV4A0A0B4J268 RNU7-62P-201ENST00000458856 62 ntBASIC-0.49□□□□□ -2.49
TRAV4A0A0B4J268 RNU6-329P-201ENST00000459618 107 ntBASIC-0.49□□□□□ -2.49
TRAV4A0A0B4J268 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.49□□□□□ -2.49
TRAV4A0A0B4J268 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.49□□□□□ -2.49
TRAV4A0A0B4J268 MTND1P7-201ENST00000632801 297 ntBASIC-0.49□□□□□ -2.49
TRAV4A0A0B4J268 SNORD113-7-201ENST00000363762 77 ntBASIC-0.5□□□□□ -2.49
TRAV4A0A0B4J268 MIR760-201ENST00000390220 80 ntBASIC-0.5□□□□□ -2.49
TRAV4A0A0B4J268 ELOCP21-201ENST00000412558 336 ntBASIC-0.5□□□□□ -2.49
TRAV4A0A0B4J268 UQCRBP2-201ENST00000447827 297 ntBASIC-0.5□□□□□ -2.49
TRAV4A0A0B4J268 RNU7-175P-201ENST00000515915 61 ntBASIC-0.5□□□□□ -2.49
TRAV4A0A0B4J268 RNU6-469P-201ENST00000516253 101 ntBASIC-0.5□□□□□ -2.49
TRAV4A0A0B4J268 RNU6-448P-201ENST00000517052 107 ntBASIC-0.5□□□□□ -2.49
TRAV4A0A0B4J268 AC022616.4-201ENST00000522985 181 ntBASIC-0.5□□□□□ -2.49
TRAV4A0A0B4J268 SNORD92-201ENST00000585078 85 ntBASIC-0.5□□□□□ -2.49
TRAV4A0A0B4J268 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.5□□□□□ -2.49
TRAV4A0A0B4J268 SNORA18.1-201ENST00000363418 128 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 SNORA63C-201ENST00000364578 129 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 RNU6-756P-201ENST00000383997 107 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 RNU6-269P-201ENST00000391077 97 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 BTF3P11-201ENST00000426582 477 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 AL358934.1-201ENST00000432346 324 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 MIR18B-201ENST00000454574 71 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 U8.19-201ENST00000459095 133 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 U8.22-201ENST00000459141 133 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 RNU4-49P-201ENST00000516080 140 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 SNORA18.4-201ENST00000516440 124 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 RNU6-320P-201ENST00000516511 106 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 RNU7-156P-201ENST00000517214 74 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 IGLVI-20-201ENST00000519296 130 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 POLR3GP2-201ENST00000588366 668 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 AC023510.2-201ENST00000622162 746 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 SNORD38B-202ENST00000625943 69 ntBASIC-0.51□□□□□ -2.49
TRAV4A0A0B4J268 RNA5SP257-201ENST00000363023 116 ntBASIC-0.52□□□□□ -2.49
TRAV4A0A0B4J268 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.52□□□□□ -2.49
TRAV4A0A0B4J268 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.52□□□□□ -2.49
TRAV4A0A0B4J268 RNU6-925P-201ENST00000384629 104 ntBASIC-0.52□□□□□ -2.49
TRAV4A0A0B4J268 MIR106A-201ENST00000384870 81 ntBASIC-0.52□□□□□ -2.49
TRAV4A0A0B4J268 MIR548H2-201ENST00000408874 88 ntBASIC-0.52□□□□□ -2.49
TRAV4A0A0B4J268 RNU6-248P-201ENST00000410720 107 ntBASIC-0.52□□□□□ -2.49
TRAV4A0A0B4J268 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.52□□□□□ -2.49
TRAV4A0A0B4J268 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.52□□□□□ -2.49
TRAV4A0A0B4J268 RNU7-187P-201ENST00000458985 68 ntBASIC-0.52□□□□□ -2.49
TRAV4A0A0B4J268 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.52□□□□□ -2.49
TRAV4A0A0B4J268 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.52□□□□□ -2.49
TRAV4A0A0B4J268 RNU6-782P-201ENST00000516852 104 ntBASIC-0.52□□□□□ -2.49
TRAV4A0A0B4J268 AC093023.1-201ENST00000547375 507 ntBASIC-0.52□□□□□ -2.49
TRAV4A0A0B4J268 AL158211.1-201ENST00000566763 763 ntBASIC-0.52□□□□□ -2.49
TRAV4A0A0B4J268 MIR3913-1-201ENST00000577744 102 ntBASIC-0.52□□□□□ -2.49
TRAV4A0A0B4J268 MIR4791-201ENST00000607666 84 ntBASIC-0.52□□□□□ -2.49
TRAV4A0A0B4J268 MIR410-201ENST00000362222 80 ntBASIC-0.53□□□□□ -2.49
TRAV4A0A0B4J268 RNU4-21P-201ENST00000362802 126 ntBASIC-0.53□□□□□ -2.49
TRAV4A0A0B4J268 SNORD114-31-201ENST00000363219 75 ntBASIC-0.53□□□□□ -2.49
TRAV4A0A0B4J268 SNORD37.1-201ENST00000390968 65 ntBASIC-0.53□□□□□ -2.49
TRAV4A0A0B4J268 U8.17-201ENST00000391292 132 ntBASIC-0.53□□□□□ -2.49
TRAV4A0A0B4J268 CYCSP46-201ENST00000423569 204 ntBASIC-0.53□□□□□ -2.49
TRAV4A0A0B4J268 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.53□□□□□ -2.49
TRAV4A0A0B4J268 SCARNA8-201ENST00000515924 131 ntBASIC-0.53□□□□□ -2.49
TRAV4A0A0B4J268 RNU6-830P-201ENST00000516353 107 ntBASIC-0.53□□□□□ -2.49
TRAV4A0A0B4J268 AL118558.2-201ENST00000556294 238 ntBASIC-0.53□□□□□ -2.49
TRAV4A0A0B4J268 MIR4645-201ENST00000583158 77 ntBASIC-0.53□□□□□ -2.49
TRAV4A0A0B4J268 MIR7107-201ENST00000611489 80 ntBASIC-0.53□□□□□ -2.49
TRAV4A0A0B4J268 Pinc.1-201ENST00000616452 154 ntBASIC-0.53□□□□□ -2.49
TRAV4A0A0B4J268 SNORD14E-201ENST00000364009 85 ntBASIC-0.54□□□□□ -2.5
TRAV4A0A0B4J268 RNU4-66P-201ENST00000365199 138 ntBASIC-0.54□□□□□ -2.5
TRAV4A0A0B4J268 SNORD114-12-201ENST00000365400 75 ntBASIC-0.54□□□□□ -2.5
TRAV4A0A0B4J268 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.54□□□□□ -2.5
TRAV4A0A0B4J268 MIR802-201ENST00000390235 94 ntBASIC-0.54□□□□□ -2.5
TRAV4A0A0B4J268 RNA5SP475-201ENST00000410568 110 ntBASIC-0.54□□□□□ -2.5
TRAV4A0A0B4J268 MTCO1P20-201ENST00000425366 358 ntBASIC-0.54□□□□□ -2.5
TRAV4A0A0B4J268 AL512326.2-201ENST00000426359 151 ntBASIC-0.54□□□□□ -2.5
TRAV4A0A0B4J268 RNU7-165P-201ENST00000458864 60 ntBASIC-0.54□□□□□ -2.5
TRAV4A0A0B4J268 SNORA25.10-201ENST00000515926 124 ntBASIC-0.54□□□□□ -2.5
TRAV4A0A0B4J268 ACA59.1-201ENST00000515966 143 ntBASIC-0.54□□□□□ -2.5
TRAV4A0A0B4J268 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.54□□□□□ -2.5
TRAV4A0A0B4J268 AC090616.2-202ENST00000584248 222 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms