Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 RNU6-682P-201ENST00000363843 106 ntBASIC2.51□□□□□ -2.01
NR2E3Q9Y5X4 RNU6-1164P-201ENST00000364428 107 ntBASIC2.51□□□□□ -2.01
NR2E3Q9Y5X4 RNU1-52P-201ENST00000384190 164 ntBASIC2.51□□□□□ -2.01
NR2E3Q9Y5X4 RNU6-886P-201ENST00000384319 105 ntBASIC2.51□□□□□ -2.01
NR2E3Q9Y5X4 MIR144-201ENST00000384886 86 ntBASIC2.51□□□□□ -2.01
NR2E3Q9Y5X4 SNORA26.5-201ENST00000391215 123 ntBASIC2.51□□□□□ -2.01
NR2E3Q9Y5X4 RNU6-918P-201ENST00000391219 106 ntBASIC2.51□□□□□ -2.01
NR2E3Q9Y5X4 AC019129.1-201ENST00000403786 261 ntBASIC2.51□□□□□ -2.01
NR2E3Q9Y5X4 AC016909.1-201ENST00000415916 166 ntBASIC2.51□□□□□ -2.01
NR2E3Q9Y5X4 AL353689.1-201ENST00000438895 199 ntBASIC2.51□□□□□ -2.01
NR2E3Q9Y5X4 SUMO1P3-201ENST00000439961 304 ntBASIC2.51□□□□□ -2.01
NR2E3Q9Y5X4 AL138752.1-201ENST00000452964 351 ntBASIC2.51□□□□□ -2.01
NR2E3Q9Y5X4 AC010598.1-201ENST00000510378 103 ntBASIC2.51□□□□□ -2.01
NR2E3Q9Y5X4 IGLV3-17-201ENST00000519099 244 ntBASIC2.51□□□□□ -2.01
NR2E3Q9Y5X4 AC022559.1-201ENST00000520905 205 ntBASIC2.51□□□□□ -2.01
NR2E3Q9Y5X4 AC024405.2-202ENST00000532731 184 ntBASIC2.51□□□□□ -2.01
NR2E3Q9Y5X4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.51□□□□□ -2.01
NR2E3Q9Y5X4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.51□□□□□ -2.01
NR2E3Q9Y5X4 MIR6845-201ENST00000613182 61 ntBASIC2.51□□□□□ -2.01
NR2E3Q9Y5X4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
NR2E3Q9Y5X4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
NR2E3Q9Y5X4 AL159152.1-201ENST00000635019 2587 ntBASIC2.5□□□□□ -2.01
NR2E3Q9Y5X4 Y_RNA.124-201ENST00000363339 93 ntBASIC2.5□□□□□ -2.01
NR2E3Q9Y5X4 Y_RNA.172-201ENST00000363765 102 ntBASIC2.5□□□□□ -2.01
NR2E3Q9Y5X4 Y_RNA.180-201ENST00000363867 113 ntBASIC2.5□□□□□ -2.01
NR2E3Q9Y5X4 RNU6-324P-201ENST00000363957 106 ntBASIC2.5□□□□□ -2.01
NR2E3Q9Y5X4 SNORD114-6-201ENST00000364393 72 ntBASIC2.5□□□□□ -2.01
NR2E3Q9Y5X4 Y_RNA.304-201ENST00000365011 112 ntBASIC2.5□□□□□ -2.01
NR2E3Q9Y5X4 RNU6-763P-201ENST00000390865 106 ntBASIC2.5□□□□□ -2.01
NR2E3Q9Y5X4 U8.19-201ENST00000459095 133 ntBASIC2.5□□□□□ -2.01
NR2E3Q9Y5X4 SNORD65B-201ENST00000459126 73 ntBASIC2.5□□□□□ -2.01
NR2E3Q9Y5X4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NR2E3Q9Y5X4 Y_RNA.679-201ENST00000516416 91 ntBASIC2.5□□□□□ -2.01
NR2E3Q9Y5X4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.5□□□□□ -2.01
NR2E3Q9Y5X4 MIR4308-201ENST00000580634 81 ntBASIC2.5□□□□□ -2.01
NR2E3Q9Y5X4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
NR2E3Q9Y5X4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 SNORA67.1-201ENST00000364749 141 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 Y_RNA.310-201ENST00000365063 113 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 RNU6-1062P-201ENST00000383908 107 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 RNU4-70P-201ENST00000384579 139 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 MIR7-2-201ENST00000384970 110 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 Y_RNA.793-201ENST00000411222 111 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 AC060773.1-201ENST00000421698 310 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 SNORA70.12-201ENST00000516084 153 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 RNU6-1146P-201ENST00000516282 102 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 RNU1-104P-201ENST00000517280 175 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 SUMO2P18-201ENST00000518873 252 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 AC136628.3-201ENST00000521868 290 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 SNORD14A-201ENST00000606526 91 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 AL365434.2-201ENST00000607979 234 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 U2.15-201ENST00000611544 191 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 U2.16-201ENST00000613119 191 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 U2.12-201ENST00000613778 191 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 U2.20-201ENST00000613956 192 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 U2.9-201ENST00000615427 191 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 AL078604.3-201ENST00000615580 211 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 U2.11-201ENST00000616345 191 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 U2.2-201ENST00000616535 191 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 U2.3-201ENST00000617785 191 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 U2.19-201ENST00000618602 191 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 RNU2-1-201ENST00000618664 191 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 U2.6-201ENST00000619225 191 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 U2.5-201ENST00000619465 191 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 U2.10-201ENST00000620268 191 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 AL365265.1-201ENST00000621045 234 ntBASIC2.49□□□□□ -2.01
NR2E3Q9Y5X4 SNORD115-3-201ENST00000363100 82 ntBASIC2.48□□□□□ -2.01
NR2E3Q9Y5X4 RNU6-271P-201ENST00000363858 105 ntBASIC2.48□□□□□ -2.01
NR2E3Q9Y5X4 RNA5SP493-201ENST00000364115 91 ntBASIC2.48□□□□□ -2.01
NR2E3Q9Y5X4 Y_RNA.368-201ENST00000365547 113 ntBASIC2.48□□□□□ -2.01
NR2E3Q9Y5X4 SNORA20B-201ENST00000384220 132 ntBASIC2.48□□□□□ -2.01
NR2E3Q9Y5X4 MIR221-201ENST00000385135 110 ntBASIC2.48□□□□□ -2.01
NR2E3Q9Y5X4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.48□□□□□ -2.01
NR2E3Q9Y5X4 BTF3P11-201ENST00000426582 477 ntBASIC2.48□□□□□ -2.01
NR2E3Q9Y5X4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.48□□□□□ -2.01
NR2E3Q9Y5X4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.48□□□□□ -2.01
NR2E3Q9Y5X4 AC079804.2-201ENST00000490376 200 ntBASIC2.48□□□□□ -2.01
NR2E3Q9Y5X4 AC011406.1-201ENST00000512440 370 ntBASIC2.48□□□□□ -2.01
NR2E3Q9Y5X4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.48□□□□□ -2.01
NR2E3Q9Y5X4 Z83818.1-201ENST00000603584 150 ntBASIC2.48□□□□□ -2.01
NR2E3Q9Y5X4 MIR6895-201ENST00000613497 78 ntBASIC2.48□□□□□ -2.01
NR2E3Q9Y5X4 MIR6132-201ENST00000622083 109 ntBASIC2.48□□□□□ -2.01
NR2E3Q9Y5X4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NR2E3Q9Y5X4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.48□□□□□ -2.01
NR2E3Q9Y5X4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
NR2E3Q9Y5X4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
NR2E3Q9Y5X4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NR2E3Q9Y5X4 RNU1-58P-201ENST00000362413 163 ntBASIC2.47□□□□□ -2.01
NR2E3Q9Y5X4 RNU6-23P-201ENST00000363283 107 ntBASIC2.47□□□□□ -2.01
NR2E3Q9Y5X4 RNU6-1048P-201ENST00000364054 107 ntBASIC2.47□□□□□ -2.01
NR2E3Q9Y5X4 RNU6-923P-201ENST00000364753 107 ntBASIC2.47□□□□□ -2.01
NR2E3Q9Y5X4 MIR873-201ENST00000401120 77 ntBASIC2.47□□□□□ -2.01
NR2E3Q9Y5X4 MIR1253-201ENST00000408273 105 ntBASIC2.47□□□□□ -2.01
NR2E3Q9Y5X4 RNA5SP270-201ENST00000411361 118 ntBASIC2.47□□□□□ -2.01
NR2E3Q9Y5X4 COX6CP10-201ENST00000416832 224 ntBASIC2.47□□□□□ -2.01
NR2E3Q9Y5X4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.47□□□□□ -2.01
NR2E3Q9Y5X4 TRMT112P2-201ENST00000512910 132 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms