Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.32□□□□□ -2.04
COL4A3BPQ9Y5P4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.32□□□□□ -2.04
COL4A3BPQ9Y5P4 JTBP1-201ENST00000441314 247 ntBASIC2.32□□□□□ -2.04
COL4A3BPQ9Y5P4 U8.19-201ENST00000459095 133 ntBASIC2.32□□□□□ -2.04
COL4A3BPQ9Y5P4 MTATP8P1-201ENST00000467115 207 ntBASIC2.32□□□□□ -2.04
COL4A3BPQ9Y5P4 AC098869.1-201ENST00000481627 292 ntBASIC2.32□□□□□ -2.04
COL4A3BPQ9Y5P4 RNU6-1045P-201ENST00000516321 107 ntBASIC2.32□□□□□ -2.04
COL4A3BPQ9Y5P4 RNU2-31P-201ENST00000516954 155 ntBASIC2.32□□□□□ -2.04
COL4A3BPQ9Y5P4 AL117187.1-201ENST00000555482 181 ntBASIC2.32□□□□□ -2.04
COL4A3BPQ9Y5P4 AL929325.1-201ENST00000603096 117 ntBASIC2.32□□□□□ -2.04
COL4A3BPQ9Y5P4 MIR6715A-201ENST00000615929 79 ntBASIC2.32□□□□□ -2.04
COL4A3BPQ9Y5P4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.32□□□□□ -2.04
COL4A3BPQ9Y5P4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.32□□□□□ -2.04
COL4A3BPQ9Y5P4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
COL4A3BPQ9Y5P4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.31□□□□□ -2.04
COL4A3BPQ9Y5P4 SNORA25.1-201ENST00000362326 128 ntBASIC2.31□□□□□ -2.04
COL4A3BPQ9Y5P4 RNU6-439P-201ENST00000384188 106 ntBASIC2.31□□□□□ -2.04
COL4A3BPQ9Y5P4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.31□□□□□ -2.04
COL4A3BPQ9Y5P4 MIR548F4-201ENST00000408515 105 ntBASIC2.31□□□□□ -2.04
COL4A3BPQ9Y5P4 MTND2P23-201ENST00000422990 651 ntBASIC2.31□□□□□ -2.04
COL4A3BPQ9Y5P4 AC233266.1-201ENST00000454518 96 ntBASIC2.31□□□□□ -2.04
COL4A3BPQ9Y5P4 RNU6-1291P-201ENST00000516591 104 ntBASIC2.31□□□□□ -2.04
COL4A3BPQ9Y5P4 RNU7-116P-201ENST00000516940 62 ntBASIC2.31□□□□□ -2.04
COL4A3BPQ9Y5P4 AC242852.1-201ENST00000612151 96 ntBASIC2.31□□□□□ -2.04
COL4A3BPQ9Y5P4 AC244015.1-201ENST00000622301 99 ntBASIC2.31□□□□□ -2.04
COL4A3BPQ9Y5P4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
COL4A3BPQ9Y5P4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL4A3BPQ9Y5P4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL4A3BPQ9Y5P4 Y_RNA.149-201ENST00000363558 117 ntBASIC2.3□□□□□ -2.04
COL4A3BPQ9Y5P4 Y_RNA.265-201ENST00000364677 108 ntBASIC2.3□□□□□ -2.04
COL4A3BPQ9Y5P4 Y_RNA.310-201ENST00000365063 113 ntBASIC2.3□□□□□ -2.04
COL4A3BPQ9Y5P4 RNA5SP37-201ENST00000365420 130 ntBASIC2.3□□□□□ -2.04
COL4A3BPQ9Y5P4 Y_RNA.418-201ENST00000384029 102 ntBASIC2.3□□□□□ -2.04
COL4A3BPQ9Y5P4 Y_RNA.541-201ENST00000384640 113 ntBASIC2.3□□□□□ -2.04
COL4A3BPQ9Y5P4 Y_RNA.574-201ENST00000384766 95 ntBASIC2.3□□□□□ -2.04
COL4A3BPQ9Y5P4 RNU6-1031P-201ENST00000384773 107 ntBASIC2.3□□□□□ -2.04
COL4A3BPQ9Y5P4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
COL4A3BPQ9Y5P4 HSPE1P21-201ENST00000438283 308 ntBASIC2.3□□□□□ -2.04
COL4A3BPQ9Y5P4 RPS4XP11-201ENST00000446897 772 ntBASIC2.3□□□□□ -2.04
COL4A3BPQ9Y5P4 AL021397.1-201ENST00000451806 248 ntBASIC2.3□□□□□ -2.04
COL4A3BPQ9Y5P4 AC025033.1-201ENST00000463883 194 ntBASIC2.3□□□□□ -2.04
COL4A3BPQ9Y5P4 SNORA31.10-201ENST00000516482 106 ntBASIC2.3□□□□□ -2.04
COL4A3BPQ9Y5P4 AC104984.5-201ENST00000586878 94 ntBASIC2.3□□□□□ -2.04
COL4A3BPQ9Y5P4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
COL4A3BPQ9Y5P4 AC100821.1-201ENST00000523153 2479 ntBASIC2.3□□□□□ -2.04
COL4A3BPQ9Y5P4 Y_RNA.26-201ENST00000362539 101 ntBASIC2.29□□□□□ -2.04
COL4A3BPQ9Y5P4 Y_RNA.84-201ENST00000363011 104 ntBASIC2.29□□□□□ -2.04
COL4A3BPQ9Y5P4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.29□□□□□ -2.04
COL4A3BPQ9Y5P4 RNA5SP482-201ENST00000391269 118 ntBASIC2.29□□□□□ -2.04
COL4A3BPQ9Y5P4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.29□□□□□ -2.04
COL4A3BPQ9Y5P4 AL445646.1-201ENST00000431784 216 ntBASIC2.29□□□□□ -2.04
COL4A3BPQ9Y5P4 UBL5P3-201ENST00000475112 231 ntBASIC2.29□□□□□ -2.04
COL4A3BPQ9Y5P4 AC090255.1-201ENST00000495779 349 ntBASIC2.29□□□□□ -2.04
COL4A3BPQ9Y5P4 AC008269.2-201ENST00000561915 1105 ntBASIC2.29□□□□□ -2.04
COL4A3BPQ9Y5P4 AL512605.2-201ENST00000592972 256 ntBASIC2.29□□□□□ -2.04
COL4A3BPQ9Y5P4 AC068647.2-201ENST00000637380 353 ntBASIC2.29□□□□□ -2.04
COL4A3BPQ9Y5P4 AC099654.10-201ENST00000640395 161 ntBASIC2.29□□□□□ -2.04
COL4A3BPQ9Y5P4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
COL4A3BPQ9Y5P4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
COL4A3BPQ9Y5P4 SNORA1B-201ENST00000362535 133 ntBASIC2.28□□□□□ -2.04
COL4A3BPQ9Y5P4 RNU6-238P-201ENST00000363313 106 ntBASIC2.28□□□□□ -2.04
COL4A3BPQ9Y5P4 RNA5SP160-201ENST00000364866 120 ntBASIC2.28□□□□□ -2.04
COL4A3BPQ9Y5P4 RNU6-1323P-201ENST00000384025 107 ntBASIC2.28□□□□□ -2.04
COL4A3BPQ9Y5P4 SNORA72-201ENST00000384339 132 ntBASIC2.28□□□□□ -2.04
COL4A3BPQ9Y5P4 MIR215-201ENST00000384858 110 ntBASIC2.28□□□□□ -2.04
COL4A3BPQ9Y5P4 Y_RNA.621-201ENST00000411065 96 ntBASIC2.28□□□□□ -2.04
COL4A3BPQ9Y5P4 STAG3L5P-204ENST00000443759 179 ntBASIC2.28□□□□□ -2.04
COL4A3BPQ9Y5P4 RNU6-717P-201ENST00000459076 104 ntBASIC2.28□□□□□ -2.04
COL4A3BPQ9Y5P4 AL049830.1-201ENST00000468034 425 ntBASIC2.28□□□□□ -2.04
COL4A3BPQ9Y5P4 RNU6-191P-201ENST00000516295 94 ntBASIC2.28□□□□□ -2.04
COL4A3BPQ9Y5P4 AC136628.3-201ENST00000521868 290 ntBASIC2.28□□□□□ -2.04
COL4A3BPQ9Y5P4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
COL4A3BPQ9Y5P4 Y_RNA.172-201ENST00000363765 102 ntBASIC2.27□□□□□ -2.05
COL4A3BPQ9Y5P4 RNU2-2P-201ENST00000410396 191 ntBASIC2.27□□□□□ -2.05
COL4A3BPQ9Y5P4 RNU6-1203P-201ENST00000410703 110 ntBASIC2.27□□□□□ -2.05
COL4A3BPQ9Y5P4 AL139156.1-201ENST00000412785 841 ntBASIC2.27□□□□□ -2.05
COL4A3BPQ9Y5P4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.27□□□□□ -2.05
COL4A3BPQ9Y5P4 MTCO1P5-201ENST00000433573 344 ntBASIC2.27□□□□□ -2.05
COL4A3BPQ9Y5P4 HMGN2P23-201ENST00000456759 269 ntBASIC2.27□□□□□ -2.05
COL4A3BPQ9Y5P4 TRBVB-201ENST00000477100 408 ntBASIC2.27□□□□□ -2.05
COL4A3BPQ9Y5P4 AC008834.1-201ENST00000511612 175 ntBASIC2.27□□□□□ -2.05
COL4A3BPQ9Y5P4 RNU1-40P-201ENST00000516816 164 ntBASIC2.27□□□□□ -2.05
COL4A3BPQ9Y5P4 RNU1-97P-201ENST00000516872 164 ntBASIC2.27□□□□□ -2.05
COL4A3BPQ9Y5P4 AC011604.1-201ENST00000545978 196 ntBASIC2.27□□□□□ -2.05
COL4A3BPQ9Y5P4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
COL4A3BPQ9Y5P4 RNU6-1123P-201ENST00000362347 106 ntBASIC2.26□□□□□ -2.05
COL4A3BPQ9Y5P4 MIR1289-2-201ENST00000408360 111 ntBASIC2.26□□□□□ -2.05
COL4A3BPQ9Y5P4 MIR1302-6-201ENST00000408466 90 ntBASIC2.26□□□□□ -2.05
COL4A3BPQ9Y5P4 snoU13.9-201ENST00000458927 103 ntBASIC2.26□□□□□ -2.05
COL4A3BPQ9Y5P4 RNU6-570P-201ENST00000517051 105 ntBASIC2.26□□□□□ -2.05
COL4A3BPQ9Y5P4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.26□□□□□ -2.05
COL4A3BPQ9Y5P4 Y_RNA.783-201ENST00000613546 102 ntBASIC2.26□□□□□ -2.05
COL4A3BPQ9Y5P4 MIR8062-201ENST00000621515 85 ntBASIC2.26□□□□□ -2.05
COL4A3BPQ9Y5P4 MIR504-201ENST00000385065 83 ntBASIC2.25□□□□□ -2.05
COL4A3BPQ9Y5P4 AL358176.2-201ENST00000425769 204 ntBASIC2.25□□□□□ -2.05
COL4A3BPQ9Y5P4 PGBD4P5-201ENST00000445958 426 ntBASIC2.25□□□□□ -2.05
COL4A3BPQ9Y5P4 AC002984.1-201ENST00000591692 448 ntBASIC2.25□□□□□ -2.05
COL4A3BPQ9Y5P4 AC021506.2-201ENST00000612354 169 ntBASIC2.25□□□□□ -2.05
COL4A3BPQ9Y5P4 AC073349.3-201ENST00000617616 186 ntBASIC2.25□□□□□ -2.05
COL4A3BPQ9Y5P4 AP000553.5-201ENST00000641933 54 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms