Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AP003357.1-201ENST00000604497 148 ntBASIC2.32□□□□□ -2.04
PCDHA3Q9Y5H8 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.32□□□□□ -2.04
PCDHA3Q9Y5H8 AC068647.2-201ENST00000637380 353 ntBASIC2.32□□□□□ -2.04
PCDHA3Q9Y5H8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHA3Q9Y5H8 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.31□□□□□ -2.04
PCDHA3Q9Y5H8 SNORA33-201ENST00000363664 130 ntBASIC2.31□□□□□ -2.04
PCDHA3Q9Y5H8 U8.7-201ENST00000364940 136 ntBASIC2.31□□□□□ -2.04
PCDHA3Q9Y5H8 Y_RNA.304-201ENST00000365011 112 ntBASIC2.31□□□□□ -2.04
PCDHA3Q9Y5H8 SNORA6-201ENST00000384033 151 ntBASIC2.31□□□□□ -2.04
PCDHA3Q9Y5H8 SNORA67.4-201ENST00000384688 142 ntBASIC2.31□□□□□ -2.04
PCDHA3Q9Y5H8 RNU6-376P-201ENST00000384731 106 ntBASIC2.31□□□□□ -2.04
PCDHA3Q9Y5H8 RNA5SP323-201ENST00000391094 133 ntBASIC2.31□□□□□ -2.04
PCDHA3Q9Y5H8 MTND2P29-201ENST00000438595 412 ntBASIC2.31□□□□□ -2.04
PCDHA3Q9Y5H8 SNORD116-28-201ENST00000516123 91 ntBASIC2.31□□□□□ -2.04
PCDHA3Q9Y5H8 AC073413.2-201ENST00000604332 360 ntBASIC2.31□□□□□ -2.04
PCDHA3Q9Y5H8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
PCDHA3Q9Y5H8 AC134026.1-201ENST00000623249 2239 ntBASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 AC245060.5-201ENST00000610778 3293 ntBASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 Y_RNA.200-201ENST00000364018 102 ntBASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 RNU4-13P-201ENST00000364019 141 ntBASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 RNU6-1048P-201ENST00000364054 107 ntBASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 RNU6-1019P-201ENST00000364424 107 ntBASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 RNU6-200P-201ENST00000364743 107 ntBASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 RNA5SP126-201ENST00000365092 109 ntBASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 RNU6-144P-201ENST00000383951 107 ntBASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 MIR221-201ENST00000385135 110 ntBASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 SNORA48.1-201ENST00000390879 135 ntBASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 MTCO2P33-201ENST00000402100 465 ntBASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 MIR1298-201ENST00000408783 112 ntBASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 RNU7-94P-201ENST00000459576 63 ntBASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 RNA5SP200-201ENST00000516360 103 ntBASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 MIR4298-201ENST00000584380 73 ntBASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 AC091178.2-201ENST00000584401 117 ntBASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 POLR3GP1-201ENST00000594073 261 ntBASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 MIR548AY-201ENST00000617669 107 ntBASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
PCDHA3Q9Y5H8 SNORA8-201ENST00000384574 139 ntBASIC2.29□□□□□ -2.04
PCDHA3Q9Y5H8 MIR520G-201ENST00000385064 90 ntBASIC2.29□□□□□ -2.04
PCDHA3Q9Y5H8 SNORA48.3-201ENST00000391081 134 ntBASIC2.29□□□□□ -2.04
PCDHA3Q9Y5H8 RNA5SP338-201ENST00000410495 85 ntBASIC2.29□□□□□ -2.04
PCDHA3Q9Y5H8 Y_RNA.626-201ENST00000411288 95 ntBASIC2.29□□□□□ -2.04
PCDHA3Q9Y5H8 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PCDHA3Q9Y5H8 AC079804.2-201ENST00000490376 200 ntBASIC2.29□□□□□ -2.04
PCDHA3Q9Y5H8 AC117454.1-201ENST00000491120 168 ntBASIC2.29□□□□□ -2.04
PCDHA3Q9Y5H8 AL163195.1-201ENST00000496941 348 ntBASIC2.29□□□□□ -2.04
PCDHA3Q9Y5H8 RNA5SP281-201ENST00000516504 135 ntBASIC2.29□□□□□ -2.04
PCDHA3Q9Y5H8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.29□□□□□ -2.04
PCDHA3Q9Y5H8 AC024405.2-202ENST00000532731 184 ntBASIC2.29□□□□□ -2.04
PCDHA3Q9Y5H8 AC130289.1-201ENST00000577321 73 ntBASIC2.29□□□□□ -2.04
PCDHA3Q9Y5H8 AC069114.2-201ENST00000604699 304 ntBASIC2.29□□□□□ -2.04
PCDHA3Q9Y5H8 MIR6840-201ENST00000611937 71 ntBASIC2.29□□□□□ -2.04
PCDHA3Q9Y5H8 U1.36-201ENST00000620684 176 ntBASIC2.29□□□□□ -2.04
PCDHA3Q9Y5H8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.29□□□□□ -2.04
PCDHA3Q9Y5H8 AC018630.2-201ENST00000534866 2403 ntBASIC2.29□□□□□ -2.04
PCDHA3Q9Y5H8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PCDHA3Q9Y5H8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PCDHA3Q9Y5H8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PCDHA3Q9Y5H8 Y_RNA.199-201ENST00000364014 102 ntBASIC2.28□□□□□ -2.04
PCDHA3Q9Y5H8 SNORA72-201ENST00000384339 132 ntBASIC2.28□□□□□ -2.04
PCDHA3Q9Y5H8 RNU6-136P-201ENST00000384663 107 ntBASIC2.28□□□□□ -2.04
PCDHA3Q9Y5H8 MIR562-201ENST00000384894 95 ntBASIC2.28□□□□□ -2.04
PCDHA3Q9Y5H8 SNORD23.1-201ENST00000408212 104 ntBASIC2.28□□□□□ -2.04
PCDHA3Q9Y5H8 RNA5SP450-201ENST00000411206 102 ntBASIC2.28□□□□□ -2.04
PCDHA3Q9Y5H8 RPS4XP11-201ENST00000446897 772 ntBASIC2.28□□□□□ -2.04
PCDHA3Q9Y5H8 Y_RNA.700-201ENST00000516806 100 ntBASIC2.28□□□□□ -2.04
PCDHA3Q9Y5H8 RNU2-19P-201ENST00000517288 84 ntBASIC2.28□□□□□ -2.04
PCDHA3Q9Y5H8 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.28□□□□□ -2.04
PCDHA3Q9Y5H8 AC127455.1-201ENST00000565496 145 ntBASIC2.28□□□□□ -2.04
PCDHA3Q9Y5H8 MIR5688-201ENST00000580619 83 ntBASIC2.28□□□□□ -2.04
PCDHA3Q9Y5H8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PCDHA3Q9Y5H8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PCDHA3Q9Y5H8 Y_RNA.83-201ENST00000363005 113 ntBASIC2.27□□□□□ -2.05
PCDHA3Q9Y5H8 Y_RNA.262-201ENST00000364641 102 ntBASIC2.27□□□□□ -2.05
PCDHA3Q9Y5H8 RNA5SP501-201ENST00000410990 112 ntBASIC2.27□□□□□ -2.05
PCDHA3Q9Y5H8 AC069257.2-201ENST00000441819 155 ntBASIC2.27□□□□□ -2.05
PCDHA3Q9Y5H8 RNVU1-2-201ENST00000516326 135 ntBASIC2.27□□□□□ -2.05
PCDHA3Q9Y5H8 RNU6-341P-201ENST00000516973 96 ntBASIC2.27□□□□□ -2.05
PCDHA3Q9Y5H8 AL358944.1-201ENST00000528537 144 ntBASIC2.27□□□□□ -2.05
PCDHA3Q9Y5H8 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.27□□□□□ -2.05
PCDHA3Q9Y5H8 AC084364.2-201ENST00000546924 395 ntBASIC2.27□□□□□ -2.05
PCDHA3Q9Y5H8 SUB1P4-201ENST00000566062 339 ntBASIC2.27□□□□□ -2.05
PCDHA3Q9Y5H8 MIR3668-201ENST00000582138 75 ntBASIC2.27□□□□□ -2.05
PCDHA3Q9Y5H8 AC078899.2-201ENST00000595282 212 ntBASIC2.27□□□□□ -2.05
PCDHA3Q9Y5H8 AL365265.1-201ENST00000621045 234 ntBASIC2.27□□□□□ -2.05
PCDHA3Q9Y5H8 MIR6079-201ENST00000635807 62 ntBASIC2.27□□□□□ -2.05
PCDHA3Q9Y5H8 RNA5SP289-201ENST00000362332 137 ntBASIC2.26□□□□□ -2.05
PCDHA3Q9Y5H8 RNU6-1205P-201ENST00000363625 106 ntBASIC2.26□□□□□ -2.05
PCDHA3Q9Y5H8 RNA5SP37-201ENST00000365420 130 ntBASIC2.26□□□□□ -2.05
PCDHA3Q9Y5H8 SNORA36B-201ENST00000410438 131 ntBASIC2.26□□□□□ -2.05
PCDHA3Q9Y5H8 RN7SL429P-201ENST00000479090 223 ntBASIC2.26□□□□□ -2.05
PCDHA3Q9Y5H8 RN7SL489P-201ENST00000486185 223 ntBASIC2.26□□□□□ -2.05
PCDHA3Q9Y5H8 RN7SL327P-201ENST00000488659 223 ntBASIC2.26□□□□□ -2.05
PCDHA3Q9Y5H8 AC090255.1-201ENST00000495779 349 ntBASIC2.26□□□□□ -2.05
PCDHA3Q9Y5H8 AC008413.1-201ENST00000511864 177 ntBASIC2.26□□□□□ -2.05
PCDHA3Q9Y5H8 RNU6-1096P-201ENST00000517089 102 ntBASIC2.26□□□□□ -2.05
PCDHA3Q9Y5H8 MIR5094-201ENST00000578766 85 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms