Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 Y_RNA.496-201ENST00000384444 101 ntBASIC1.38□□□□□ -2.19
PCDHGA1Q9Y5H4 AL034345.1-201ENST00000407768 123 ntBASIC1.38□□□□□ -2.19
PCDHGA1Q9Y5H4 RPS27P16-201ENST00000425758 201 ntBASIC1.38□□□□□ -2.19
PCDHGA1Q9Y5H4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.38□□□□□ -2.19
PCDHGA1Q9Y5H4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.38□□□□□ -2.19
PCDHGA1Q9Y5H4 Y_RNA.675-201ENST00000516389 149 ntBASIC1.38□□□□□ -2.19
PCDHGA1Q9Y5H4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.38□□□□□ -2.19
PCDHGA1Q9Y5H4 AC023442.1-201ENST00000531247 422 ntBASIC1.38□□□□□ -2.19
PCDHGA1Q9Y5H4 AL160236.1-201ENST00000556317 195 ntBASIC1.38□□□□□ -2.19
PCDHGA1Q9Y5H4 MIR4659A-201ENST00000580269 81 ntBASIC1.38□□□□□ -2.19
PCDHGA1Q9Y5H4 AL078603.1-201ENST00000603824 313 ntBASIC1.38□□□□□ -2.19
PCDHGA1Q9Y5H4 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.38□□□□□ -2.19
PCDHGA1Q9Y5H4 AC127459.3-201ENST00000624328 466 ntBASIC1.38□□□□□ -2.19
PCDHGA1Q9Y5H4 AC091895.1-201ENST00000624494 256 ntBASIC1.38□□□□□ -2.19
PCDHGA1Q9Y5H4 MIR4272-201ENST00000635924 64 ntBASIC1.38□□□□□ -2.19
PCDHGA1Q9Y5H4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 MIR26B-201ENST00000362251 77 ntBASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 Y_RNA.5-201ENST00000362334 102 ntBASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 Y_RNA.101-201ENST00000363154 102 ntBASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 RNU6-626P-201ENST00000363354 107 ntBASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 SNORD115-30-201ENST00000364117 82 ntBASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 RNU6-53P-201ENST00000365367 106 ntBASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 RNU6-117P-201ENST00000365415 107 ntBASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 RNU6-20P-201ENST00000384106 107 ntBASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 SNORA12.1-201ENST00000390873 148 ntBASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 MIR1304-201ENST00000408243 91 ntBASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 MTND4LP11-201ENST00000422184 280 ntBASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 AL135790.2-201ENST00000437701 267 ntBASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 RNU6-976P-201ENST00000516086 111 ntBASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 RNU6-341P-201ENST00000516973 96 ntBASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 AC006600.1-201ENST00000572529 153 ntBASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 SNORA28-201ENST00000606769 126 ntBASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 AC240442.1-201ENST00000616055 283 ntBASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 MIR8065-201ENST00000620577 100 ntBASIC1.37□□□□□ -2.19
PCDHGA1Q9Y5H4 Y_RNA.124-201ENST00000363339 93 ntBASIC1.36□□□□□ -2.19
PCDHGA1Q9Y5H4 RNU1-115P-201ENST00000365329 160 ntBASIC1.36□□□□□ -2.19
PCDHGA1Q9Y5H4 RNA5SP259-201ENST00000365541 109 ntBASIC1.36□□□□□ -2.19
PCDHGA1Q9Y5H4 RNU2-54P-201ENST00000410299 190 ntBASIC1.36□□□□□ -2.19
PCDHGA1Q9Y5H4 AC091021.1-201ENST00000468051 388 ntBASIC1.36□□□□□ -2.19
PCDHGA1Q9Y5H4 AC023790.1-201ENST00000482174 347 ntBASIC1.36□□□□□ -2.19
PCDHGA1Q9Y5H4 RNU6-1278P-201ENST00000516130 107 ntBASIC1.36□□□□□ -2.19
PCDHGA1Q9Y5H4 AC019176.1-201ENST00000518519 225 ntBASIC1.36□□□□□ -2.19
PCDHGA1Q9Y5H4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.36□□□□□ -2.19
PCDHGA1Q9Y5H4 AC005176.2-201ENST00000596933 147 ntBASIC1.36□□□□□ -2.19
PCDHGA1Q9Y5H4 AL117336.2-201ENST00000602435 335 ntBASIC1.36□□□□□ -2.19
PCDHGA1Q9Y5H4 AC092447.9-201ENST00000603395 144 ntBASIC1.36□□□□□ -2.19
PCDHGA1Q9Y5H4 AC006380.1-201ENST00000603598 186 ntBASIC1.36□□□□□ -2.19
PCDHGA1Q9Y5H4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.36□□□□□ -2.19
PCDHGA1Q9Y5H4 AC011476.5-201ENST00000615594 130 ntBASIC1.36□□□□□ -2.19
PCDHGA1Q9Y5H4 RMST_2.1-201ENST00000617263 136 ntBASIC1.36□□□□□ -2.19
PCDHGA1Q9Y5H4 AC104985.2-201ENST00000620598 500 ntBASIC1.36□□□□□ -2.19
PCDHGA1Q9Y5H4 U6.92-201ENST00000636464 89 ntBASIC1.36□□□□□ -2.19
PCDHGA1Q9Y5H4 Y_RNA.230-201ENST00000364348 109 ntBASIC1.35□□□□□ -2.19
PCDHGA1Q9Y5H4 Y_RNA.315-201ENST00000365117 102 ntBASIC1.35□□□□□ -2.19
PCDHGA1Q9Y5H4 SNORD114-22-201ENST00000365423 72 ntBASIC1.35□□□□□ -2.19
PCDHGA1Q9Y5H4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.35□□□□□ -2.19
PCDHGA1Q9Y5H4 RNU6-376P-201ENST00000384731 106 ntBASIC1.35□□□□□ -2.19
PCDHGA1Q9Y5H4 Y_RNA.579-201ENST00000390939 94 ntBASIC1.35□□□□□ -2.19
PCDHGA1Q9Y5H4 SNRPGP13-201ENST00000442212 177 ntBASIC1.35□□□□□ -2.19
PCDHGA1Q9Y5H4 RNU4-77P-201ENST00000516692 156 ntBASIC1.35□□□□□ -2.19
PCDHGA1Q9Y5H4 AL021879.1-201ENST00000611756 288 ntBASIC1.35□□□□□ -2.19
PCDHGA1Q9Y5H4 Y_RNA.112-201ENST00000363250 102 ntBASIC1.34□□□□□ -2.19
PCDHGA1Q9Y5H4 Y_RNA.197-201ENST00000364004 102 ntBASIC1.34□□□□□ -2.19
PCDHGA1Q9Y5H4 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
PCDHGA1Q9Y5H4 Y_RNA.540-201ENST00000384638 111 ntBASIC1.34□□□□□ -2.19
PCDHGA1Q9Y5H4 MIR150-201ENST00000385048 84 ntBASIC1.34□□□□□ -2.19
PCDHGA1Q9Y5H4 RNU5A-5P-201ENST00000411054 116 ntBASIC1.34□□□□□ -2.19
PCDHGA1Q9Y5H4 RNU6-1199P-201ENST00000411249 104 ntBASIC1.34□□□□□ -2.19
PCDHGA1Q9Y5H4 HSPE1P13-201ENST00000451143 297 ntBASIC1.34□□□□□ -2.19
PCDHGA1Q9Y5H4 Y_RNA.661-201ENST00000516003 99 ntBASIC1.34□□□□□ -2.19
PCDHGA1Q9Y5H4 SNORA70.12-201ENST00000516084 153 ntBASIC1.34□□□□□ -2.19
PCDHGA1Q9Y5H4 SUMO2P16-201ENST00000519475 264 ntBASIC1.34□□□□□ -2.19
PCDHGA1Q9Y5H4 AC008269.2-201ENST00000561915 1105 ntBASIC1.34□□□□□ -2.19
PCDHGA1Q9Y5H4 MIR5188-201ENST00000583467 113 ntBASIC1.34□□□□□ -2.19
PCDHGA1Q9Y5H4 AL133255.1-201ENST00000606374 441 ntBASIC1.34□□□□□ -2.19
PCDHGA1Q9Y5H4 AC010205.1-201ENST00000616668 449 ntBASIC1.34□□□□□ -2.19
PCDHGA1Q9Y5H4 AC073349.3-201ENST00000617616 186 ntBASIC1.34□□□□□ -2.19
PCDHGA1Q9Y5H4 AL513423.1-201ENST00000621695 132 ntBASIC1.34□□□□□ -2.19
PCDHGA1Q9Y5H4 AL008636.1-201ENST00000625038 1018 ntBASIC1.34□□□□□ -2.19
PCDHGA1Q9Y5H4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
PCDHGA1Q9Y5H4 Y_RNA.39-201ENST00000362620 98 ntBASIC1.33□□□□□ -2.2
PCDHGA1Q9Y5H4 Y_RNA.267-201ENST00000364679 109 ntBASIC1.33□□□□□ -2.2
PCDHGA1Q9Y5H4 Y_RNA.446-201ENST00000384178 104 ntBASIC1.33□□□□□ -2.2
PCDHGA1Q9Y5H4 AL031003.1-201ENST00000404229 172 ntBASIC1.33□□□□□ -2.2
PCDHGA1Q9Y5H4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.33□□□□□ -2.2
PCDHGA1Q9Y5H4 RPS4XP11-201ENST00000446897 772 ntBASIC1.33□□□□□ -2.2
PCDHGA1Q9Y5H4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.33□□□□□ -2.2
PCDHGA1Q9Y5H4 SNORA40.14-201ENST00000516543 86 ntBASIC1.33□□□□□ -2.2
PCDHGA1Q9Y5H4 RNU7-28P-201ENST00000516759 62 ntBASIC1.33□□□□□ -2.2
PCDHGA1Q9Y5H4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.33□□□□□ -2.2
PCDHGA1Q9Y5H4 AL080274.1-201ENST00000605565 220 ntBASIC1.33□□□□□ -2.2
PCDHGA1Q9Y5H4 AL138825.1-201ENST00000618587 192 ntBASIC1.33□□□□□ -2.2
PCDHGA1Q9Y5H4 AL606534.2-204ENST00000635008 178 ntBASIC1.33□□□□□ -2.2
PCDHGA1Q9Y5H4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
PCDHGA1Q9Y5H4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
PCDHGA1Q9Y5H4 RNU6-939P-201ENST00000384634 107 ntBASIC1.32□□□□□ -2.2
PCDHGA1Q9Y5H4 MIR520G-201ENST00000385064 90 ntBASIC1.32□□□□□ -2.2
PCDHGA1Q9Y5H4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.32□□□□□ -2.2
PCDHGA1Q9Y5H4 STAG3L5P-204ENST00000443759 179 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 192.7 ms