Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
PCDHGA9Q9Y5G4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDHGA9Q9Y5G4 SNORD116-13-201ENST00000384408 92 ntBASIC2.35□□□□□ -2.03
PCDHGA9Q9Y5G4 MIR520A-201ENST00000384862 85 ntBASIC2.35□□□□□ -2.03
PCDHGA9Q9Y5G4 RNU6-763P-201ENST00000390865 106 ntBASIC2.35□□□□□ -2.03
PCDHGA9Q9Y5G4 AL356320.1-201ENST00000429616 163 ntBASIC2.35□□□□□ -2.03
PCDHGA9Q9Y5G4 AC104332.1-201ENST00000440471 797 ntBASIC2.35□□□□□ -2.03
PCDHGA9Q9Y5G4 SNORD2.1-201ENST00000458762 69 ntBASIC2.35□□□□□ -2.03
PCDHGA9Q9Y5G4 Y_RNA.638-201ENST00000459374 113 ntBASIC2.35□□□□□ -2.03
PCDHGA9Q9Y5G4 Y_RNA.637-201ENST00000459424 114 ntBASIC2.35□□□□□ -2.03
PCDHGA9Q9Y5G4 COX6CP14-201ENST00000469580 174 ntBASIC2.35□□□□□ -2.03
PCDHGA9Q9Y5G4 RNU6-63P-201ENST00000516690 95 ntBASIC2.35□□□□□ -2.03
PCDHGA9Q9Y5G4 RNA5SP402-201ENST00000517148 110 ntBASIC2.35□□□□□ -2.03
PCDHGA9Q9Y5G4 IGKV3-31-201ENST00000523109 329 ntBASIC2.35□□□□□ -2.03
PCDHGA9Q9Y5G4 MIR5692C2-201ENST00000577959 77 ntBASIC2.35□□□□□ -2.03
PCDHGA9Q9Y5G4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.35□□□□□ -2.03
PCDHGA9Q9Y5G4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDHGA9Q9Y5G4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDHGA9Q9Y5G4 Y_RNA.65-201ENST00000362846 100 ntBASIC2.34□□□□□ -2.03
PCDHGA9Q9Y5G4 RNU6-211P-201ENST00000384047 107 ntBASIC2.34□□□□□ -2.03
PCDHGA9Q9Y5G4 RNA5SP212-201ENST00000391223 107 ntBASIC2.34□□□□□ -2.03
PCDHGA9Q9Y5G4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.34□□□□□ -2.03
PCDHGA9Q9Y5G4 Z98742.3-201ENST00000418637 326 ntBASIC2.34□□□□□ -2.03
PCDHGA9Q9Y5G4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDHGA9Q9Y5G4 RNU7-141P-201ENST00000459304 62 ntBASIC2.34□□□□□ -2.03
PCDHGA9Q9Y5G4 RNA5SP481-201ENST00000516814 122 ntBASIC2.34□□□□□ -2.03
PCDHGA9Q9Y5G4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PCDHGA9Q9Y5G4 MIR5694-201ENST00000581190 76 ntBASIC2.34□□□□□ -2.03
PCDHGA9Q9Y5G4 AC010900.2-201ENST00000604508 210 ntBASIC2.34□□□□□ -2.03
PCDHGA9Q9Y5G4 AL442067.1-201ENST00000613261 223 ntBASIC2.34□□□□□ -2.03
PCDHGA9Q9Y5G4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
PCDHGA9Q9Y5G4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PCDHGA9Q9Y5G4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
PCDHGA9Q9Y5G4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 RNA5SP289-201ENST00000362332 137 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 RNU6-1205P-201ENST00000363625 106 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 Y_RNA.172-201ENST00000363765 102 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 RNY1-201ENST00000364228 113 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 RNU6-136P-201ENST00000384663 107 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 SNORA26.5-201ENST00000391215 123 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 MTCO2P33-201ENST00000402100 465 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 RNU2-7P-201ENST00000410794 178 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 AL158823.1-201ENST00000418441 478 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 AL135790.2-201ENST00000437701 267 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 RNVU1-2-201ENST00000516326 135 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 Y_RNA.680-201ENST00000516441 93 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 RNU6-1096P-201ENST00000517089 102 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 RNU6-111P-201ENST00000517179 105 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 IGLV3-17-201ENST00000519099 244 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 AP002004.2-201ENST00000531656 154 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 AC121758.2-201ENST00000553271 193 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 MIR4648-201ENST00000580107 72 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 MIR4524B-201ENST00000581569 115 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 MIR2681-201ENST00000581814 105 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 AC091178.2-201ENST00000584401 117 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 AC005357.1-201ENST00000588399 301 ntBASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PCDHGA9Q9Y5G4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHGA9Q9Y5G4 Y_RNA.117-201ENST00000363294 101 ntBASIC2.32□□□□□ -2.04
PCDHGA9Q9Y5G4 U8.7-201ENST00000364940 136 ntBASIC2.32□□□□□ -2.04
PCDHGA9Q9Y5G4 SNORA6-201ENST00000384033 151 ntBASIC2.32□□□□□ -2.04
PCDHGA9Q9Y5G4 Y_RNA.539-201ENST00000384635 107 ntBASIC2.32□□□□□ -2.04
PCDHGA9Q9Y5G4 RNA5SP210-201ENST00000391034 120 ntBASIC2.32□□□□□ -2.04
PCDHGA9Q9Y5G4 AL359511.1-201ENST00000402970 211 ntBASIC2.32□□□□□ -2.04
PCDHGA9Q9Y5G4 AL512604.1-201ENST00000404812 257 ntBASIC2.32□□□□□ -2.04
PCDHGA9Q9Y5G4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PCDHGA9Q9Y5G4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.32□□□□□ -2.04
PCDHGA9Q9Y5G4 RNU7-28P-201ENST00000516759 62 ntBASIC2.32□□□□□ -2.04
PCDHGA9Q9Y5G4 AC024405.2-202ENST00000532731 184 ntBASIC2.32□□□□□ -2.04
PCDHGA9Q9Y5G4 AC127455.1-201ENST00000565496 145 ntBASIC2.32□□□□□ -2.04
PCDHGA9Q9Y5G4 AC100821.1-201ENST00000523153 2479 ntBASIC2.32□□□□□ -2.04
PCDHGA9Q9Y5G4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
PCDHGA9Q9Y5G4 SNORA33-201ENST00000363664 130 ntBASIC2.31□□□□□ -2.04
PCDHGA9Q9Y5G4 SNORA63D-201ENST00000364359 132 ntBASIC2.31□□□□□ -2.04
PCDHGA9Q9Y5G4 Y_RNA.292-201ENST00000364904 97 ntBASIC2.31□□□□□ -2.04
PCDHGA9Q9Y5G4 RNU6-338P-201ENST00000383888 105 ntBASIC2.31□□□□□ -2.04
PCDHGA9Q9Y5G4 SNORA80E-201ENST00000384744 137 ntBASIC2.31□□□□□ -2.04
PCDHGA9Q9Y5G4 SNORA36B-201ENST00000410438 131 ntBASIC2.31□□□□□ -2.04
PCDHGA9Q9Y5G4 AC245047.4-201ENST00000433189 144 ntBASIC2.31□□□□□ -2.04
PCDHGA9Q9Y5G4 RPS4XP11-201ENST00000446897 772 ntBASIC2.31□□□□□ -2.04
PCDHGA9Q9Y5G4 AC091021.1-201ENST00000468051 388 ntBASIC2.31□□□□□ -2.04
PCDHGA9Q9Y5G4 AC117454.1-201ENST00000491120 168 ntBASIC2.31□□□□□ -2.04
PCDHGA9Q9Y5G4 AC011604.1-201ENST00000545978 196 ntBASIC2.31□□□□□ -2.04
PCDHGA9Q9Y5G4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PCDHGA9Q9Y5G4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.31□□□□□ -2.04
PCDHGA9Q9Y5G4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
PCDHGA9Q9Y5G4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PCDHGA9Q9Y5G4 Y_RNA.257-201ENST00000364596 102 ntBASIC2.3□□□□□ -2.04
PCDHGA9Q9Y5G4 Y_RNA.262-201ENST00000364641 102 ntBASIC2.3□□□□□ -2.04
PCDHGA9Q9Y5G4 Y_RNA.304-201ENST00000365011 112 ntBASIC2.3□□□□□ -2.04
PCDHGA9Q9Y5G4 RN7SKP223-201ENST00000410582 62 ntBASIC2.3□□□□□ -2.04
PCDHGA9Q9Y5G4 RPL23AP54-201ENST00000495129 419 ntBASIC2.3□□□□□ -2.04
PCDHGA9Q9Y5G4 AC234781.5-201ENST00000508429 271 ntBASIC2.3□□□□□ -2.04
PCDHGA9Q9Y5G4 RNU6-794P-201ENST00000517261 64 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms