Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 Y_RNA.262-201ENST00000364641 102 ntBASIC2.44□□□□□ -2.02
PCDHB1Q9Y5F3 SNORA19-201ENST00000384737 128 ntBASIC2.44□□□□□ -2.02
PCDHB1Q9Y5F3 Y_RNA.572-201ENST00000384757 98 ntBASIC2.44□□□□□ -2.02
PCDHB1Q9Y5F3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
PCDHB1Q9Y5F3 RNA5SP425-201ENST00000410336 112 ntBASIC2.44□□□□□ -2.02
PCDHB1Q9Y5F3 RN7SKP223-201ENST00000410582 62 ntBASIC2.44□□□□□ -2.02
PCDHB1Q9Y5F3 RNU5E-9P-201ENST00000411164 104 ntBASIC2.44□□□□□ -2.02
PCDHB1Q9Y5F3 AC018634.1-201ENST00000437554 401 ntBASIC2.44□□□□□ -2.02
PCDHB1Q9Y5F3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.44□□□□□ -2.02
PCDHB1Q9Y5F3 Y_RNA.662-201ENST00000516028 97 ntBASIC2.44□□□□□ -2.02
PCDHB1Q9Y5F3 RNU1-104P-201ENST00000517280 175 ntBASIC2.44□□□□□ -2.02
PCDHB1Q9Y5F3 IGKV3-31-201ENST00000523109 329 ntBASIC2.44□□□□□ -2.02
PCDHB1Q9Y5F3 MRPS18CP4-201ENST00000535821 231 ntBASIC2.44□□□□□ -2.02
PCDHB1Q9Y5F3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.44□□□□□ -2.02
PCDHB1Q9Y5F3 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.44□□□□□ -2.02
PCDHB1Q9Y5F3 MIR338-201ENST00000636369 67 ntBASIC2.44□□□□□ -2.02
PCDHB1Q9Y5F3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
PCDHB1Q9Y5F3 Y_RNA.240-201ENST00000364469 95 ntBASIC2.43□□□□□ -2.02
PCDHB1Q9Y5F3 Y_RNA.287-201ENST00000364853 94 ntBASIC2.43□□□□□ -2.02
PCDHB1Q9Y5F3 RNU6-417P-201ENST00000384712 107 ntBASIC2.43□□□□□ -2.02
PCDHB1Q9Y5F3 AC007064.1-201ENST00000412238 351 ntBASIC2.43□□□□□ -2.02
PCDHB1Q9Y5F3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.43□□□□□ -2.02
PCDHB1Q9Y5F3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.43□□□□□ -2.02
PCDHB1Q9Y5F3 AC010409.1-201ENST00000487382 476 ntBASIC2.43□□□□□ -2.02
PCDHB1Q9Y5F3 RNU7-172P-201ENST00000517125 64 ntBASIC2.43□□□□□ -2.02
PCDHB1Q9Y5F3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.43□□□□□ -2.02
PCDHB1Q9Y5F3 MIR3169-201ENST00000578032 83 ntBASIC2.43□□□□□ -2.02
PCDHB1Q9Y5F3 MIR4648-201ENST00000580107 72 ntBASIC2.43□□□□□ -2.02
PCDHB1Q9Y5F3 AC005786.1-201ENST00000588553 154 ntBASIC2.43□□□□□ -2.02
PCDHB1Q9Y5F3 AC007229.1-201ENST00000590455 412 ntBASIC2.43□□□□□ -2.02
PCDHB1Q9Y5F3 AL359075.3-201ENST00000613288 217 ntBASIC2.43□□□□□ -2.02
PCDHB1Q9Y5F3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.43□□□□□ -2.02
PCDHB1Q9Y5F3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 RNU1-22P-201ENST00000363334 158 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 RNU6-899P-201ENST00000363947 107 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 SNORA25.6-201ENST00000364121 118 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 RNU1-96P-201ENST00000364163 162 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 Y_RNA.398-201ENST00000383952 99 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 RNU1-138P-201ENST00000384093 164 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 AL359511.1-201ENST00000402970 211 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 MIR1289-2-201ENST00000408360 111 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 RNU2-2P-201ENST00000410396 191 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 RNU6-1135P-201ENST00000411083 103 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 RNA5SP270-201ENST00000411361 118 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 CST2P1-201ENST00000425770 87 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 RPS15AP28-201ENST00000435088 386 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 RPS20P10-201ENST00000451209 253 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 AC091021.1-201ENST00000468051 388 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 AC097462.1-201ENST00000514125 324 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 RNU7-99P-201ENST00000516271 62 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 SNORA31.15-201ENST00000516771 132 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 Y_RNA.703-201ENST00000516846 111 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 MIR4446-201ENST00000578505 67 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 MIR3910-1-201ENST00000580936 111 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 RNU2-4P-201ENST00000606190 192 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 U6.106-201ENST00000636360 105 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 FO624990.1-201ENST00000636373 85 ntBASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.42□□□□□ -2.02
PCDHB1Q9Y5F3 AC016717.2-201ENST00000609089 5141 ntBASIC2.41□□□□□ -2.02
PCDHB1Q9Y5F3 AL356292.1-201ENST00000283110 373 ntBASIC2.41□□□□□ -2.02
PCDHB1Q9Y5F3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PCDHB1Q9Y5F3 SNORA67.1-201ENST00000364749 141 ntBASIC2.41□□□□□ -2.02
PCDHB1Q9Y5F3 SNORA72.4-201ENST00000384174 132 ntBASIC2.41□□□□□ -2.02
PCDHB1Q9Y5F3 RNU1-52P-201ENST00000384190 164 ntBASIC2.41□□□□□ -2.02
PCDHB1Q9Y5F3 MIR764-201ENST00000390811 85 ntBASIC2.41□□□□□ -2.02
PCDHB1Q9Y5F3 MTCO2P33-201ENST00000402100 465 ntBASIC2.41□□□□□ -2.02
PCDHB1Q9Y5F3 SNORA11.4-201ENST00000408823 129 ntBASIC2.41□□□□□ -2.02
PCDHB1Q9Y5F3 RNU1-142P-201ENST00000516682 145 ntBASIC2.41□□□□□ -2.02
PCDHB1Q9Y5F3 RNU7-116P-201ENST00000516940 62 ntBASIC2.41□□□□□ -2.02
PCDHB1Q9Y5F3 AC024995.1-201ENST00000523014 93 ntBASIC2.41□□□□□ -2.02
PCDHB1Q9Y5F3 MIR5692C2-201ENST00000577959 77 ntBASIC2.41□□□□□ -2.02
PCDHB1Q9Y5F3 AC005972.2-201ENST00000604690 348 ntBASIC2.41□□□□□ -2.02
PCDHB1Q9Y5F3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.41□□□□□ -2.02
PCDHB1Q9Y5F3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.41□□□□□ -2.02
PCDHB1Q9Y5F3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
PCDHB1Q9Y5F3 RNU6-117P-201ENST00000365415 107 ntBASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 RNU6-1130P-201ENST00000365434 107 ntBASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 Y_RNA.571-201ENST00000384753 98 ntBASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 MIR518A2-201ENST00000384966 87 ntBASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 RNU11-3P-201ENST00000391111 133 ntBASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 RNA5SP465-201ENST00000391195 109 ntBASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 HMGN2P39-201ENST00000398005 273 ntBASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 AL135786.1-201ENST00000415892 214 ntBASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 EBAG9P1-201ENST00000418955 543 ntBASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 HSPE1P21-201ENST00000438283 308 ntBASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 snoU13.23-201ENST00000458863 104 ntBASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 AP005660.1-201ENST00000522972 293 ntBASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 AC100767.1-201ENST00000528178 123 ntBASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 MIR3144-201ENST00000579460 79 ntBASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 AL049779.4-201ENST00000604500 156 ntBASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 AC067747.1-201ENST00000608026 250 ntBASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 AC010297.1-201ENST00000623948 149 ntBASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 MIR1291-201ENST00000627649 87 ntBASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PCDHB1Q9Y5F3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PCDHB1Q9Y5F3 RNU4-13P-201ENST00000364019 141 ntBASIC2.39□□□□□ -2.03
PCDHB1Q9Y5F3 snoU2_19.4-201ENST00000364329 80 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms