Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 AC073325.2-201ENST00000339545 159 ntBASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 U8.1-201ENST00000362843 134 ntBASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 RNA5SP205-201ENST00000364653 136 ntBASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 Y_RNA.294-201ENST00000364916 102 ntBASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 SNORD72-201ENST00000390994 80 ntBASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 SNORA26-201ENST00000391286 122 ntBASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 AC005326.1-201ENST00000429197 123 ntBASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 Y_RNA.686-201ENST00000516548 134 ntBASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 RN7SKP282-201ENST00000516824 299 ntBASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 AC024995.1-201ENST00000523014 93 ntBASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 U7.2-201ENST00000607576 63 ntBASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 AC022513.1-201ENST00000624512 117 ntBASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SF3B6Q9Y3B4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 Y_RNA.66-201ENST00000362862 102 ntBASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 RNU6-80P-201ENST00000384195 107 ntBASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 MIR515-2-201ENST00000384883 83 ntBASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 MIR515-1-201ENST00000384884 83 ntBASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 SNORD88.1-201ENST00000408684 91 ntBASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 AC091153.1-201ENST00000466297 402 ntBASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 AL049830.1-201ENST00000468034 425 ntBASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 SCGB1D5P-201ENST00000515134 247 ntBASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 RNU4-57P-201ENST00000515980 135 ntBASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 RNU6-365P-201ENST00000517113 106 ntBASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 AL358944.1-201ENST00000528537 144 ntBASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 AC007751.1-201ENST00000529260 376 ntBASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 AP002004.2-201ENST00000531656 154 ntBASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SF3B6Q9Y3B4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 RNU1-148P-201ENST00000384472 162 ntBASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 RNU4-47P-201ENST00000410876 114 ntBASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 AL606517.2-201ENST00000442855 241 ntBASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 RNU7-94P-201ENST00000459576 63 ntBASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 RN7SL499P-201ENST00000481141 276 ntBASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 MIR5195-201ENST00000583555 115 ntBASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 AC008507.4-201ENST00000585464 127 ntBASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 AL359881.1-201ENST00000602916 267 ntBASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 AC007318.2-201ENST00000620999 243 ntBASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SF3B6Q9Y3B4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SF3B6Q9Y3B4 Y_RNA.333-201ENST00000365274 102 ntBASIC2.67□□□□□ -1.98
SF3B6Q9Y3B4 SNORA70.4-201ENST00000365509 134 ntBASIC2.67□□□□□ -1.98
SF3B6Q9Y3B4 Y_RNA.525-201ENST00000384570 113 ntBASIC2.67□□□□□ -1.98
SF3B6Q9Y3B4 BX510359.4-201ENST00000423750 193 ntBASIC2.67□□□□□ -1.98
SF3B6Q9Y3B4 RNU7-107P-201ENST00000459121 61 ntBASIC2.67□□□□□ -1.98
SF3B6Q9Y3B4 AC096725.1-201ENST00000514266 313 ntBASIC2.67□□□□□ -1.98
SF3B6Q9Y3B4 RNU6-126P-201ENST00000516685 103 ntBASIC2.67□□□□□ -1.98
SF3B6Q9Y3B4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.67□□□□□ -1.98
SF3B6Q9Y3B4 MIR5680-201ENST00000577577 84 ntBASIC2.67□□□□□ -1.98
SF3B6Q9Y3B4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.67□□□□□ -1.98
SF3B6Q9Y3B4 AC022217.4-201ENST00000604389 163 ntBASIC2.67□□□□□ -1.98
SF3B6Q9Y3B4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SF3B6Q9Y3B4 MIR208A-201ENST00000362287 71 ntBASIC2.66□□□□□ -1.98
SF3B6Q9Y3B4 SNORD68-201ENST00000363214 84 ntBASIC2.66□□□□□ -1.98
SF3B6Q9Y3B4 SNORD56.5-201ENST00000364281 72 ntBASIC2.66□□□□□ -1.98
SF3B6Q9Y3B4 MIR522-201ENST00000385071 87 ntBASIC2.66□□□□□ -1.98
SF3B6Q9Y3B4 SNORA11.1-201ENST00000408133 129 ntBASIC2.66□□□□□ -1.98
SF3B6Q9Y3B4 SNORA18.4-201ENST00000516440 124 ntBASIC2.66□□□□□ -1.98
SF3B6Q9Y3B4 RNU6-504P-201ENST00000516568 104 ntBASIC2.66□□□□□ -1.98
SF3B6Q9Y3B4 RNU6-1270P-201ENST00000517128 108 ntBASIC2.66□□□□□ -1.98
SF3B6Q9Y3B4 SNORA70.24-201ENST00000517233 118 ntBASIC2.66□□□□□ -1.98
SF3B6Q9Y3B4 MIR3126-201ENST00000577443 74 ntBASIC2.66□□□□□ -1.98
SF3B6Q9Y3B4 AC131055.1-201ENST00000584626 316 ntBASIC2.66□□□□□ -1.98
SF3B6Q9Y3B4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.66□□□□□ -1.98
SF3B6Q9Y3B4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.66□□□□□ -1.98
SF3B6Q9Y3B4 AL136360.1-201ENST00000503377 1900 ntBASIC2.66□□□□□ -1.98
SF3B6Q9Y3B4 AC108206.1-201ENST00000570186 4159 ntBASIC2.65□□□□□ -1.98
SF3B6Q9Y3B4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
SF3B6Q9Y3B4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SF3B6Q9Y3B4 RNU1-58P-201ENST00000362413 163 ntBASIC2.65□□□□□ -1.99
SF3B6Q9Y3B4 RNU6-235P-201ENST00000362644 107 ntBASIC2.65□□□□□ -1.99
SF3B6Q9Y3B4 SNORD50B-201ENST00000364995 70 ntBASIC2.65□□□□□ -1.99
SF3B6Q9Y3B4 SNORA1-201ENST00000384107 130 ntBASIC2.65□□□□□ -1.99
SF3B6Q9Y3B4 RNA5SP109-201ENST00000391010 116 ntBASIC2.65□□□□□ -1.99
SF3B6Q9Y3B4 Y_RNA.629-201ENST00000411368 105 ntBASIC2.65□□□□□ -1.99
SF3B6Q9Y3B4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms