Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AC022137.1-201ENST00000483735 151 ntBASIC3.77□□□□□ -1.81
COL17A1Q9UMD9 AC006380.1-201ENST00000603598 186 ntBASIC3.77□□□□□ -1.81
COL17A1Q9UMD9 MIR8070-201ENST00000616510 88 ntBASIC3.77□□□□□ -1.81
COL17A1Q9UMD9 MIR3674-201ENST00000636576 68 ntBASIC3.77□□□□□ -1.81
COL17A1Q9UMD9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.77□□□□□ -1.81
COL17A1Q9UMD9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL17A1Q9UMD9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL17A1Q9UMD9 SNORD18B-201ENST00000365659 72 ntBASIC3.76□□□□□ -1.81
COL17A1Q9UMD9 SNORA26.3-201ENST00000391119 136 ntBASIC3.76□□□□□ -1.81
COL17A1Q9UMD9 CBX3P9-201ENST00000402326 552 ntBASIC3.76□□□□□ -1.81
COL17A1Q9UMD9 RNA5SP475-201ENST00000410568 110 ntBASIC3.76□□□□□ -1.81
COL17A1Q9UMD9 RNU6-383P-201ENST00000410864 94 ntBASIC3.76□□□□□ -1.81
COL17A1Q9UMD9 IGKV1-22-201ENST00000524313 326 ntBASIC3.76□□□□□ -1.81
COL17A1Q9UMD9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.76□□□□□ -1.81
COL17A1Q9UMD9 MIR6076-201ENST00000617521 113 ntBASIC3.76□□□□□ -1.81
COL17A1Q9UMD9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
COL17A1Q9UMD9 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.76□□□□□ -1.81
COL17A1Q9UMD9 AC010733.2-201ENST00000589496 5702 ntBASIC3.76□□□□□ -1.81
COL17A1Q9UMD9 SNORD45.3-201ENST00000363836 72 ntBASIC3.75□□□□□ -1.81
COL17A1Q9UMD9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
COL17A1Q9UMD9 AL512633.1-201ENST00000399931 655 ntBASIC3.75□□□□□ -1.81
COL17A1Q9UMD9 AC096649.2-201ENST00000416186 393 ntBASIC3.75□□□□□ -1.81
COL17A1Q9UMD9 AL161651.1-201ENST00000440882 223 ntBASIC3.75□□□□□ -1.81
COL17A1Q9UMD9 snoU13.6-201ENST00000458785 104 ntBASIC3.75□□□□□ -1.81
COL17A1Q9UMD9 RPS29P20-201ENST00000489592 171 ntBASIC3.75□□□□□ -1.81
COL17A1Q9UMD9 MIR4724-201ENST00000579485 89 ntBASIC3.75□□□□□ -1.81
COL17A1Q9UMD9 SNRPGP20-201ENST00000604477 205 ntBASIC3.75□□□□□ -1.81
COL17A1Q9UMD9 AC012531.5-201ENST00000611375 151 ntBASIC3.75□□□□□ -1.81
COL17A1Q9UMD9 Y_RNA.17-201ENST00000362433 111 ntBASIC3.74□□□□□ -1.81
COL17A1Q9UMD9 RNU6-787P-201ENST00000384032 107 ntBASIC3.74□□□□□ -1.81
COL17A1Q9UMD9 SNORA36A-201ENST00000384221 132 ntBASIC3.74□□□□□ -1.81
COL17A1Q9UMD9 RNU6-136P-201ENST00000384663 107 ntBASIC3.74□□□□□ -1.81
COL17A1Q9UMD9 SNRPGP8-201ENST00000454064 226 ntBASIC3.74□□□□□ -1.81
COL17A1Q9UMD9 RNU7-141P-201ENST00000459304 62 ntBASIC3.74□□□□□ -1.81
COL17A1Q9UMD9 SNORA31.1-201ENST00000515993 133 ntBASIC3.74□□□□□ -1.81
COL17A1Q9UMD9 SNORA31.5-201ENST00000516190 133 ntBASIC3.74□□□□□ -1.81
COL17A1Q9UMD9 RNU2-12P-201ENST00000517216 168 ntBASIC3.74□□□□□ -1.81
COL17A1Q9UMD9 MIR5688-201ENST00000580619 83 ntBASIC3.74□□□□□ -1.81
COL17A1Q9UMD9 AC131055.1-201ENST00000584626 316 ntBASIC3.74□□□□□ -1.81
COL17A1Q9UMD9 AC002076.2-201ENST00000617362 122 ntBASIC3.74□□□□□ -1.81
COL17A1Q9UMD9 AC093908.1-201ENST00000623125 8092 ntBASIC3.74□□□□□ -1.81
COL17A1Q9UMD9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.74□□□□□ -1.81
COL17A1Q9UMD9 RNU6-1285P-201ENST00000363480 105 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 RNU6-497P-201ENST00000365316 104 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 RNU6-793P-201ENST00000384233 104 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 RNU6-622P-201ENST00000384272 103 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 Y_RNA.528-201ENST00000384575 108 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 RNU6-279P-201ENST00000391297 101 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 SNORA19.1-201ENST00000410656 129 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 AC244505.4-201ENST00000434905 287 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 SSXP5-201ENST00000443473 287 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 AC107297.1-201ENST00000459991 176 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 SNORA63.5-201ENST00000363548 123 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 AC007215.1-201ENST00000464893 276 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 RPL23AP42-201ENST00000471152 471 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 RPL30P14-201ENST00000482744 348 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 RN7SL297P-201ENST00000483161 293 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 SNORD19.2-201ENST00000516978 73 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 MIR3186-201ENST00000577404 85 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 MIR3923-201ENST00000579521 83 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 RNU6-94P-201ENST00000607728 107 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.73□□□□□ -1.81
COL17A1Q9UMD9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL17A1Q9UMD9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COL17A1Q9UMD9 MIR367-201ENST00000362299 68 ntBASIC3.72□□□□□ -1.81
COL17A1Q9UMD9 RNU6-454P-201ENST00000364292 107 ntBASIC3.72□□□□□ -1.81
COL17A1Q9UMD9 RNU6-1276P-201ENST00000365372 104 ntBASIC3.72□□□□□ -1.81
COL17A1Q9UMD9 ARF4P2-201ENST00000430209 526 ntBASIC3.72□□□□□ -1.81
COL17A1Q9UMD9 AC011753.1-201ENST00000451001 220 ntBASIC3.72□□□□□ -1.81
COL17A1Q9UMD9 RNU6-857P-201ENST00000515893 110 ntBASIC3.72□□□□□ -1.81
COL17A1Q9UMD9 RNU6-91P-201ENST00000607774 107 ntBASIC3.72□□□□□ -1.81
COL17A1Q9UMD9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.81
COL17A1Q9UMD9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL17A1Q9UMD9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.71□□□□□ -1.82
COL17A1Q9UMD9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COL17A1Q9UMD9 RNU6-727P-201ENST00000363592 107 ntBASIC3.71□□□□□ -1.82
COL17A1Q9UMD9 RNU6-978P-201ENST00000364371 103 ntBASIC3.71□□□□□ -1.82
COL17A1Q9UMD9 Y_RNA.342-201ENST00000365352 113 ntBASIC3.71□□□□□ -1.82
COL17A1Q9UMD9 RNU6-748P-201ENST00000384648 107 ntBASIC3.71□□□□□ -1.82
COL17A1Q9UMD9 MIR549A-201ENST00000385268 96 ntBASIC3.71□□□□□ -1.82
COL17A1Q9UMD9 MIR208B-201ENST00000401172 77 ntBASIC3.71□□□□□ -1.82
COL17A1Q9UMD9 RNU6-321P-201ENST00000410912 106 ntBASIC3.71□□□□□ -1.82
COL17A1Q9UMD9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.71□□□□□ -1.82
COL17A1Q9UMD9 AIG1P1-201ENST00000503376 148 ntBASIC3.71□□□□□ -1.82
COL17A1Q9UMD9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COL17A1Q9UMD9 AL035470.1-201ENST00000622571 220 ntBASIC3.71□□□□□ -1.82
COL17A1Q9UMD9 SNORD98-201ENST00000636377 67 ntBASIC3.71□□□□□ -1.82
COL17A1Q9UMD9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL17A1Q9UMD9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.7□□□□□ -1.82
COL17A1Q9UMD9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL17A1Q9UMD9 RNU1-62P-201ENST00000362599 164 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms