Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 MIR3145-201ENST00000580727 82 ntBASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 SNORA4-201ENST00000584302 138 ntBASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 BX248123.2-201ENST00000606318 124 ntBASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 U1.36-201ENST00000620684 176 ntBASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 AC006435.5-201ENST00000624486 112 ntBASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
HDAC9Q9UKV0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HDAC9Q9UKV0 snoU2-30.2-201ENST00000362805 70 ntBASIC2.33□□□□□ -2.04
HDAC9Q9UKV0 Y_RNA.287-201ENST00000364853 94 ntBASIC2.33□□□□□ -2.04
HDAC9Q9UKV0 RNU6-326P-201ENST00000365480 107 ntBASIC2.33□□□□□ -2.04
HDAC9Q9UKV0 MIR873-201ENST00000401120 77 ntBASIC2.33□□□□□ -2.04
HDAC9Q9UKV0 RNU2-38P-201ENST00000410856 79 ntBASIC2.33□□□□□ -2.04
HDAC9Q9UKV0 RPL23AP7-203ENST00000449021 469 ntBASIC2.33□□□□□ -2.04
HDAC9Q9UKV0 AC090255.1-201ENST00000495779 349 ntBASIC2.33□□□□□ -2.04
HDAC9Q9UKV0 RNU6-1041P-201ENST00000516254 102 ntBASIC2.33□□□□□ -2.04
HDAC9Q9UKV0 RNU2-31P-201ENST00000516954 155 ntBASIC2.33□□□□□ -2.04
HDAC9Q9UKV0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.33□□□□□ -2.04
HDAC9Q9UKV0 MIR5089-201ENST00000580047 84 ntBASIC2.33□□□□□ -2.04
HDAC9Q9UKV0 MIR338-201ENST00000636369 67 ntBASIC2.33□□□□□ -2.04
HDAC9Q9UKV0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.33□□□□□ -2.04
HDAC9Q9UKV0 AL359851.1-201ENST00000569460 4997 ntBASIC2.33□□□□□ -2.04
HDAC9Q9UKV0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
HDAC9Q9UKV0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HDAC9Q9UKV0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HDAC9Q9UKV0 RNU6-324P-201ENST00000363957 106 ntBASIC2.32□□□□□ -2.04
HDAC9Q9UKV0 Y_RNA.562-201ENST00000384695 113 ntBASIC2.32□□□□□ -2.04
HDAC9Q9UKV0 MIR597-201ENST00000384968 97 ntBASIC2.32□□□□□ -2.04
HDAC9Q9UKV0 RNA5SP212-201ENST00000391223 107 ntBASIC2.32□□□□□ -2.04
HDAC9Q9UKV0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.32□□□□□ -2.04
HDAC9Q9UKV0 MTCO1P5-201ENST00000433573 344 ntBASIC2.32□□□□□ -2.04
HDAC9Q9UKV0 RPL23AP6-201ENST00000446637 472 ntBASIC2.32□□□□□ -2.04
HDAC9Q9UKV0 ATP5J2P3-201ENST00000451550 258 ntBASIC2.32□□□□□ -2.04
HDAC9Q9UKV0 SERF1AP1-201ENST00000514575 187 ntBASIC2.32□□□□□ -2.04
HDAC9Q9UKV0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.32□□□□□ -2.04
HDAC9Q9UKV0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.32□□□□□ -2.04
HDAC9Q9UKV0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.32□□□□□ -2.04
HDAC9Q9UKV0 AC062037.2-201ENST00000610137 73 ntBASIC2.32□□□□□ -2.04
HDAC9Q9UKV0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HDAC9Q9UKV0 AL391987.6-201ENST00000305671 199 ntBASIC2.31□□□□□ -2.04
HDAC9Q9UKV0 RNU4-80P-201ENST00000363200 141 ntBASIC2.31□□□□□ -2.04
HDAC9Q9UKV0 SNORA53-201ENST00000391141 249 ntBASIC2.31□□□□□ -2.04
HDAC9Q9UKV0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HDAC9Q9UKV0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.31□□□□□ -2.04
HDAC9Q9UKV0 RNU6-1132P-201ENST00000459214 107 ntBASIC2.31□□□□□ -2.04
HDAC9Q9UKV0 AC027419.1-201ENST00000522976 328 ntBASIC2.31□□□□□ -2.04
HDAC9Q9UKV0 AC012433.1-201ENST00000588916 398 ntBASIC2.31□□□□□ -2.04
HDAC9Q9UKV0 AP000942.4-201ENST00000604811 241 ntBASIC2.31□□□□□ -2.04
HDAC9Q9UKV0 Y_RNA.14-201ENST00000362415 103 ntBASIC2.3□□□□□ -2.04
HDAC9Q9UKV0 RNU6-271P-201ENST00000363858 105 ntBASIC2.3□□□□□ -2.04
HDAC9Q9UKV0 RNU6-417P-201ENST00000384712 107 ntBASIC2.3□□□□□ -2.04
HDAC9Q9UKV0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.3□□□□□ -2.04
HDAC9Q9UKV0 AC099677.2-201ENST00000436385 175 ntBASIC2.3□□□□□ -2.04
HDAC9Q9UKV0 AL135790.2-201ENST00000437701 267 ntBASIC2.3□□□□□ -2.04
HDAC9Q9UKV0 RPS26P55-201ENST00000471178 356 ntBASIC2.3□□□□□ -2.04
HDAC9Q9UKV0 RNU6-1146P-201ENST00000516282 102 ntBASIC2.3□□□□□ -2.04
HDAC9Q9UKV0 RNU6-191P-201ENST00000516295 94 ntBASIC2.3□□□□□ -2.04
HDAC9Q9UKV0 RNU1-40P-201ENST00000516816 164 ntBASIC2.3□□□□□ -2.04
HDAC9Q9UKV0 RNU1-97P-201ENST00000516872 164 ntBASIC2.3□□□□□ -2.04
HDAC9Q9UKV0 SCARNA24.2-201ENST00000516968 130 ntBASIC2.3□□□□□ -2.04
HDAC9Q9UKV0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.3□□□□□ -2.04
HDAC9Q9UKV0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.3□□□□□ -2.04
HDAC9Q9UKV0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.3□□□□□ -2.04
HDAC9Q9UKV0 CENPCP1-201ENST00000533085 2578 ntBASIC2.3□□□□□ -2.04
HDAC9Q9UKV0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.29□□□□□ -2.04
HDAC9Q9UKV0 MTND1P19-201ENST00000511780 315 ntBASIC2.29□□□□□ -2.04
HDAC9Q9UKV0 RNA5SP20-201ENST00000515976 84 ntBASIC2.29□□□□□ -2.04
HDAC9Q9UKV0 SNORA70.12-201ENST00000516084 153 ntBASIC2.29□□□□□ -2.04
HDAC9Q9UKV0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.29□□□□□ -2.04
HDAC9Q9UKV0 MIR3683-201ENST00000580847 82 ntBASIC2.29□□□□□ -2.04
HDAC9Q9UKV0 AC005786.1-201ENST00000588553 154 ntBASIC2.29□□□□□ -2.04
HDAC9Q9UKV0 U6.73-201ENST00000619194 103 ntBASIC2.29□□□□□ -2.04
HDAC9Q9UKV0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HDAC9Q9UKV0 SNORA33-201ENST00000363664 130 ntBASIC2.28□□□□□ -2.04
HDAC9Q9UKV0 RNA5SP160-201ENST00000364866 120 ntBASIC2.28□□□□□ -2.04
HDAC9Q9UKV0 RNU6-407P-201ENST00000365280 104 ntBASIC2.28□□□□□ -2.04
HDAC9Q9UKV0 MIR1253-201ENST00000408273 105 ntBASIC2.28□□□□□ -2.04
HDAC9Q9UKV0 AL021397.1-201ENST00000451806 248 ntBASIC2.28□□□□□ -2.04
HDAC9Q9UKV0 MTND4LP30-201ENST00000454092 297 ntBASIC2.28□□□□□ -2.04
HDAC9Q9UKV0 AC091959.1-201ENST00000495857 238 ntBASIC2.28□□□□□ -2.04
HDAC9Q9UKV0 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.28□□□□□ -2.04
HDAC9Q9UKV0 RNU7-128P-201ENST00000517247 62 ntBASIC2.28□□□□□ -2.04
HDAC9Q9UKV0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.28□□□□□ -2.04
HDAC9Q9UKV0 AL137100.2-201ENST00000555786 315 ntBASIC2.28□□□□□ -2.04
HDAC9Q9UKV0 RPL21P9-201ENST00000556149 474 ntBASIC2.28□□□□□ -2.04
HDAC9Q9UKV0 AC022254.1-201ENST00000567857 235 ntBASIC2.28□□□□□ -2.04
HDAC9Q9UKV0 MIR4438-201ENST00000585271 93 ntBASIC2.28□□□□□ -2.04
HDAC9Q9UKV0 SNRPGP19-201ENST00000603826 189 ntBASIC2.28□□□□□ -2.04
HDAC9Q9UKV0 U2.14-201ENST00000615943 113 ntBASIC2.28□□□□□ -2.04
HDAC9Q9UKV0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.28□□□□□ -2.04
HDAC9Q9UKV0 U6.108-201ENST00000637764 58 ntBASIC2.28□□□□□ -2.04
HDAC9Q9UKV0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
HDAC9Q9UKV0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.27□□□□□ -2.05
HDAC9Q9UKV0 SNORA25.1-201ENST00000362326 128 ntBASIC2.27□□□□□ -2.05
HDAC9Q9UKV0 RNU6-862P-201ENST00000362804 105 ntBASIC2.27□□□□□ -2.05
HDAC9Q9UKV0 RNU1-22P-201ENST00000363334 158 ntBASIC2.27□□□□□ -2.05
HDAC9Q9UKV0 RNU1-96P-201ENST00000364163 162 ntBASIC2.27□□□□□ -2.05
HDAC9Q9UKV0 Y_RNA.307-201ENST00000365022 117 ntBASIC2.27□□□□□ -2.05
HDAC9Q9UKV0 RNU6-117P-201ENST00000365415 107 ntBASIC2.27□□□□□ -2.05
HDAC9Q9UKV0 Y_RNA.401-201ENST00000383965 117 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms