Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RPS23P4-201ENST00000487908 423 ntBASIC0.9□□□□□ -2.27
CLCF1Q9UBD9 AL133373.1-201ENST00000497098 94 ntBASIC0.9□□□□□ -2.27
CLCF1Q9UBD9 SNORA70.12-201ENST00000516084 153 ntBASIC0.9□□□□□ -2.27
CLCF1Q9UBD9 RNU7-40P-201ENST00000516397 64 ntBASIC0.9□□□□□ -2.27
CLCF1Q9UBD9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.9□□□□□ -2.27
CLCF1Q9UBD9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
CLCF1Q9UBD9 AC006380.1-201ENST00000603598 186 ntBASIC0.9□□□□□ -2.27
CLCF1Q9UBD9 AC122108.2-201ENST00000611946 526 ntBASIC0.9□□□□□ -2.27
CLCF1Q9UBD9 AC004467.1-201ENST00000615678 330 ntBASIC0.9□□□□□ -2.27
CLCF1Q9UBD9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
CLCF1Q9UBD9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
CLCF1Q9UBD9 Y_RNA.116-201ENST00000363292 103 ntBASIC0.89□□□□□ -2.27
CLCF1Q9UBD9 RNU6-890P-201ENST00000384121 107 ntBASIC0.89□□□□□ -2.27
CLCF1Q9UBD9 SNORA25-201ENST00000384384 134 ntBASIC0.89□□□□□ -2.27
CLCF1Q9UBD9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.89□□□□□ -2.27
CLCF1Q9UBD9 MRPL35P3-201ENST00000421557 364 ntBASIC0.89□□□□□ -2.27
CLCF1Q9UBD9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.89□□□□□ -2.27
CLCF1Q9UBD9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.89□□□□□ -2.27
CLCF1Q9UBD9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.89□□□□□ -2.27
CLCF1Q9UBD9 AC105758.1-201ENST00000506038 399 ntBASIC0.89□□□□□ -2.27
CLCF1Q9UBD9 PRDX4P1-201ENST00000507189 574 ntBASIC0.89□□□□□ -2.27
CLCF1Q9UBD9 RNU6-470P-201ENST00000515954 104 ntBASIC0.89□□□□□ -2.27
CLCF1Q9UBD9 RNU6-120P-201ENST00000516077 103 ntBASIC0.89□□□□□ -2.27
CLCF1Q9UBD9 RNU6-1096P-201ENST00000517089 102 ntBASIC0.89□□□□□ -2.27
CLCF1Q9UBD9 RNU2-12P-201ENST00000517216 168 ntBASIC0.89□□□□□ -2.27
CLCF1Q9UBD9 AL357312.1-201ENST00000603879 298 ntBASIC0.89□□□□□ -2.27
CLCF1Q9UBD9 BX284668.6-201ENST00000606899 438 ntBASIC0.89□□□□□ -2.27
CLCF1Q9UBD9 RNU6-961P-201ENST00000363893 105 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 SNORD115-30-201ENST00000364117 82 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 Y_RNA.361-201ENST00000365515 120 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 SNORA22-201ENST00000383907 134 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 RNU6-926P-201ENST00000384075 107 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 SNORA70.7-201ENST00000384159 133 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 RNY3P4-201ENST00000384428 101 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 SNORA22C-201ENST00000384614 134 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 RNU6-136P-201ENST00000384663 107 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 Y_RNA.605-201ENST00000410577 105 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 RPS29P28-201ENST00000446439 141 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 HSPE1P13-201ENST00000451143 297 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 RPL30P15-201ENST00000457129 321 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 OR2A41P-201ENST00000473586 105 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 SNORA31.4-201ENST00000516049 129 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 RNU6-559P-201ENST00000516151 98 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 RNU6-113P-201ENST00000516653 101 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 SNORA70.22-201ENST00000517160 124 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 AC023442.1-201ENST00000531247 422 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 AL022345.2-201ENST00000606307 135 ntBASIC0.88□□□□□ -2.27
CLCF1Q9UBD9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CLCF1Q9UBD9 Y_RNA.474-201ENST00000384341 102 ntBASIC0.87□□□□□ -2.27
CLCF1Q9UBD9 SNORD41-201ENST00000386967 70 ntBASIC0.87□□□□□ -2.27
CLCF1Q9UBD9 RNU6-1054P-201ENST00000411293 104 ntBASIC0.87□□□□□ -2.27
CLCF1Q9UBD9 AC138393.2-201ENST00000414742 246 ntBASIC0.87□□□□□ -2.27
CLCF1Q9UBD9 AC093850.1-201ENST00000454121 251 ntBASIC0.87□□□□□ -2.27
CLCF1Q9UBD9 RNU6-917P-201ENST00000516294 104 ntBASIC0.87□□□□□ -2.27
CLCF1Q9UBD9 RNU6-63P-201ENST00000516690 95 ntBASIC0.87□□□□□ -2.27
CLCF1Q9UBD9 SNORA20.3-201ENST00000516880 132 ntBASIC0.87□□□□□ -2.27
CLCF1Q9UBD9 RNA5SP404-201ENST00000517118 132 ntBASIC0.87□□□□□ -2.27
CLCF1Q9UBD9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.87□□□□□ -2.27
CLCF1Q9UBD9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.87□□□□□ -2.27
CLCF1Q9UBD9 AL355073.2-201ENST00000612106 557 ntBASIC0.87□□□□□ -2.27
CLCF1Q9UBD9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.87□□□□□ -2.27
CLCF1Q9UBD9 AC027335.2-201ENST00000624030 375 ntBASIC0.87□□□□□ -2.27
CLCF1Q9UBD9 AC099654.14-201ENST00000638599 341 ntBASIC0.87□□□□□ -2.27
CLCF1Q9UBD9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.87□□□□□ -2.27
CLCF1Q9UBD9 MIRLET7C-201ENST00000362160 84 ntBASIC0.86□□□□□ -2.27
CLCF1Q9UBD9 RNU4-41P-201ENST00000364426 143 ntBASIC0.86□□□□□ -2.27
CLCF1Q9UBD9 RNU6-1297P-201ENST00000384415 104 ntBASIC0.86□□□□□ -2.27
CLCF1Q9UBD9 MIR520E-201ENST00000384867 87 ntBASIC0.86□□□□□ -2.27
CLCF1Q9UBD9 MIR532-201ENST00000385025 91 ntBASIC0.86□□□□□ -2.27
CLCF1Q9UBD9 SNORD78.2-201ENST00000391076 69 ntBASIC0.86□□□□□ -2.27
CLCF1Q9UBD9 RNU6-1304P-201ENST00000411374 106 ntBASIC0.86□□□□□ -2.27
CLCF1Q9UBD9 AL162725.1-201ENST00000435405 301 ntBASIC0.86□□□□□ -2.27
CLCF1Q9UBD9 AC099799.1-201ENST00000439809 192 ntBASIC0.86□□□□□ -2.27
CLCF1Q9UBD9 Z98949.2-201ENST00000440996 144 ntBASIC0.86□□□□□ -2.27
CLCF1Q9UBD9 RPL39P39-201ENST00000455840 151 ntBASIC0.86□□□□□ -2.27
CLCF1Q9UBD9 ELOCP24-201ENST00000456370 334 ntBASIC0.86□□□□□ -2.27
CLCF1Q9UBD9 RNU7-169P-201ENST00000459456 61 ntBASIC0.86□□□□□ -2.27
CLCF1Q9UBD9 AC082651.2-201ENST00000496833 166 ntBASIC0.86□□□□□ -2.27
CLCF1Q9UBD9 SNORA31.2-201ENST00000516019 134 ntBASIC0.86□□□□□ -2.27
CLCF1Q9UBD9 SNORD116-28-201ENST00000516123 91 ntBASIC0.86□□□□□ -2.27
CLCF1Q9UBD9 FAM106DP-201ENST00000586416 501 ntBASIC0.86□□□□□ -2.27
CLCF1Q9UBD9 AC005176.2-201ENST00000596933 147 ntBASIC0.86□□□□□ -2.27
CLCF1Q9UBD9 RNU6-490P-201ENST00000362985 107 ntBASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 RNU1-124P-201ENST00000363861 145 ntBASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 Y_RNA.314-201ENST00000365114 102 ntBASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 Y_RNA.387-201ENST00000383918 102 ntBASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 MIR628-201ENST00000385229 95 ntBASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 MIR518E-201ENST00000385252 88 ntBASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 MIR891A-201ENST00000401237 79 ntBASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 AL031003.1-201ENST00000404229 172 ntBASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 RNU2-54P-201ENST00000410299 190 ntBASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 RNA5SP511-201ENST00000410487 115 ntBASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 AL354751.2-201ENST00000415471 210 ntBASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 MTCO3P10-201ENST00000455912 772 ntBASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 RNU6-947P-201ENST00000516264 106 ntBASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 RNU6-911P-201ENST00000516523 104 ntBASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 RNU6-1337P-201ENST00000516525 95 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms