Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RNU6-436P-201ENST00000516171 114 ntBASIC2.04□□□□□ -2.08
LRFN1Q9P244 SCARNA24.2-201ENST00000516968 130 ntBASIC2.04□□□□□ -2.08
LRFN1Q9P244 RPL21P9-201ENST00000556149 474 ntBASIC2.04□□□□□ -2.08
LRFN1Q9P244 AC012433.1-201ENST00000588916 398 ntBASIC2.04□□□□□ -2.08
LRFN1Q9P244 AC103810.8-201ENST00000607347 118 ntBASIC2.04□□□□□ -2.08
LRFN1Q9P244 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
LRFN1Q9P244 MIR335-201ENST00000362173 94 ntBASIC2.03□□□□□ -2.08
LRFN1Q9P244 MIRLET7G-201ENST00000362280 84 ntBASIC2.03□□□□□ -2.08
LRFN1Q9P244 Y_RNA.14-201ENST00000362415 103 ntBASIC2.03□□□□□ -2.08
LRFN1Q9P244 Y_RNA.383-201ENST00000383855 97 ntBASIC2.03□□□□□ -2.08
LRFN1Q9P244 Y_RNA.569-201ENST00000384749 103 ntBASIC2.03□□□□□ -2.08
LRFN1Q9P244 RNU6-360P-201ENST00000390944 104 ntBASIC2.03□□□□□ -2.08
LRFN1Q9P244 Y_RNA.618-201ENST00000410949 107 ntBASIC2.03□□□□□ -2.08
LRFN1Q9P244 AL603825.1-201ENST00000438481 80 ntBASIC2.03□□□□□ -2.08
LRFN1Q9P244 HSPE1P9-201ENST00000440046 311 ntBASIC2.03□□□□□ -2.08
LRFN1Q9P244 RNU7-94P-201ENST00000459576 63 ntBASIC2.03□□□□□ -2.08
LRFN1Q9P244 RNU6-1278P-201ENST00000516130 107 ntBASIC2.03□□□□□ -2.08
LRFN1Q9P244 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.03□□□□□ -2.08
LRFN1Q9P244 Y_RNA.676-201ENST00000516393 96 ntBASIC2.03□□□□□ -2.08
LRFN1Q9P244 MIR514B-201ENST00000516774 80 ntBASIC2.03□□□□□ -2.08
LRFN1Q9P244 AC110588.1-201ENST00000559699 137 ntBASIC2.03□□□□□ -2.08
LRFN1Q9P244 AC073413.2-201ENST00000604332 360 ntBASIC2.03□□□□□ -2.08
LRFN1Q9P244 AC022217.4-201ENST00000604389 163 ntBASIC2.03□□□□□ -2.08
LRFN1Q9P244 AL353997.5-201ENST00000618886 171 ntBASIC2.03□□□□□ -2.08
LRFN1Q9P244 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.03□□□□□ -2.08
LRFN1Q9P244 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
LRFN1Q9P244 Y_RNA.188-201ENST00000363952 111 ntBASIC2.02□□□□□ -2.09
LRFN1Q9P244 Y_RNA.447-201ENST00000384184 113 ntBASIC2.02□□□□□ -2.09
LRFN1Q9P244 MT-TG-201ENST00000387429 68 ntBASIC2.02□□□□□ -2.09
LRFN1Q9P244 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
LRFN1Q9P244 RNU6-710P-201ENST00000410424 105 ntBASIC2.02□□□□□ -2.09
LRFN1Q9P244 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.02□□□□□ -2.09
LRFN1Q9P244 AL606517.2-201ENST00000442855 241 ntBASIC2.02□□□□□ -2.09
LRFN1Q9P244 RPL23AP42-201ENST00000471152 471 ntBASIC2.02□□□□□ -2.09
LRFN1Q9P244 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.02□□□□□ -2.09
LRFN1Q9P244 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.02□□□□□ -2.09
LRFN1Q9P244 MTND1P19-201ENST00000511780 315 ntBASIC2.02□□□□□ -2.09
LRFN1Q9P244 RNA5SP200-201ENST00000516360 103 ntBASIC2.02□□□□□ -2.09
LRFN1Q9P244 Y_RNA.680-201ENST00000516441 93 ntBASIC2.02□□□□□ -2.09
LRFN1Q9P244 RNU6-1271P-201ENST00000517049 105 ntBASIC2.02□□□□□ -2.09
LRFN1Q9P244 MIR3671-201ENST00000580455 88 ntBASIC2.02□□□□□ -2.09
LRFN1Q9P244 AC018630.2-201ENST00000534866 2403 ntBASIC2.02□□□□□ -2.09
LRFN1Q9P244 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
LRFN1Q9P244 AL359851.1-201ENST00000569460 4997 ntBASIC2.02□□□□□ -2.09
LRFN1Q9P244 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
LRFN1Q9P244 Y_RNA.350-201ENST00000365409 98 ntBASIC2.01□□□□□ -2.09
LRFN1Q9P244 RNU6-326P-201ENST00000365480 107 ntBASIC2.01□□□□□ -2.09
LRFN1Q9P244 Y_RNA.418-201ENST00000384029 102 ntBASIC2.01□□□□□ -2.09
LRFN1Q9P244 Y_RNA.562-201ENST00000384695 113 ntBASIC2.01□□□□□ -2.09
LRFN1Q9P244 RNA5SP109-201ENST00000391010 116 ntBASIC2.01□□□□□ -2.09
LRFN1Q9P244 HMGN2P19-201ENST00000425149 265 ntBASIC2.01□□□□□ -2.09
LRFN1Q9P244 POLR2KP2-201ENST00000438155 177 ntBASIC2.01□□□□□ -2.09
LRFN1Q9P244 RPL39P38-201ENST00000467018 153 ntBASIC2.01□□□□□ -2.09
LRFN1Q9P244 SERF1AP1-201ENST00000514575 187 ntBASIC2.01□□□□□ -2.09
LRFN1Q9P244 RNA5SP458-201ENST00000516188 119 ntBASIC2.01□□□□□ -2.09
LRFN1Q9P244 RNU2-31P-201ENST00000516954 155 ntBASIC2.01□□□□□ -2.09
LRFN1Q9P244 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.01□□□□□ -2.09
LRFN1Q9P244 AC009831.4-201ENST00000620744 325 ntBASIC2.01□□□□□ -2.09
LRFN1Q9P244 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LRFN1Q9P244 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2□□□□□ -2.09
LRFN1Q9P244 AL356292.1-201ENST00000283110 373 ntBASIC2□□□□□ -2.09
LRFN1Q9P244 Y_RNA.329-201ENST00000365209 107 ntBASIC2□□□□□ -2.09
LRFN1Q9P244 Y_RNA.477-201ENST00000384352 108 ntBASIC2□□□□□ -2.09
LRFN1Q9P244 SNORA64-201ENST00000384674 134 ntBASIC2□□□□□ -2.09
LRFN1Q9P244 RNU6-376P-201ENST00000384731 106 ntBASIC2□□□□□ -2.09
LRFN1Q9P244 SNORA53-201ENST00000391141 249 ntBASIC2□□□□□ -2.09
LRFN1Q9P244 snoU13.27-201ENST00000459278 104 ntBASIC2□□□□□ -2.09
LRFN1Q9P244 SCARNA16.3-201ENST00000516595 184 ntBASIC2□□□□□ -2.09
LRFN1Q9P244 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2□□□□□ -2.09
LRFN1Q9P244 MIR3128-201ENST00000581957 66 ntBASIC2□□□□□ -2.09
LRFN1Q9P244 MIR219B-201ENST00000637023 88 ntBASIC2□□□□□ -2.09
LRFN1Q9P244 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2□□□□□ -2.09
LRFN1Q9P244 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
LRFN1Q9P244 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
LRFN1Q9P244 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
LRFN1Q9P244 Y_RNA.136-201ENST00000363444 102 ntBASIC1.99□□□□□ -2.09
LRFN1Q9P244 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.99□□□□□ -2.09
LRFN1Q9P244 RNU6-950P-201ENST00000384651 107 ntBASIC1.99□□□□□ -2.09
LRFN1Q9P244 MIR676-201ENST00000390702 67 ntBASIC1.99□□□□□ -2.09
LRFN1Q9P244 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.99□□□□□ -2.09
LRFN1Q9P244 FTH1P12-201ENST00000432137 551 ntBASIC1.99□□□□□ -2.09
LRFN1Q9P244 MTND4LP30-201ENST00000454092 297 ntBASIC1.99□□□□□ -2.09
LRFN1Q9P244 RPL36AP21-201ENST00000490372 323 ntBASIC1.99□□□□□ -2.09
LRFN1Q9P244 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.99□□□□□ -2.09
LRFN1Q9P244 MIR3145-201ENST00000580727 82 ntBASIC1.99□□□□□ -2.09
LRFN1Q9P244 AC091178.2-201ENST00000584401 117 ntBASIC1.99□□□□□ -2.09
LRFN1Q9P244 DEFB117-201ENST00000602356 141 ntBASIC1.99□□□□□ -2.09
LRFN1Q9P244 MIR6079-201ENST00000635807 62 ntBASIC1.99□□□□□ -2.09
LRFN1Q9P244 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
LRFN1Q9P244 SNORA4.2-201ENST00000365313 147 ntBASIC1.98□□□□□ -2.09
LRFN1Q9P244 SNORA67.3-201ENST00000384366 140 ntBASIC1.98□□□□□ -2.09
LRFN1Q9P244 MIR562-201ENST00000384894 95 ntBASIC1.98□□□□□ -2.09
LRFN1Q9P244 SNORA48.3-201ENST00000391081 134 ntBASIC1.98□□□□□ -2.09
LRFN1Q9P244 RNU6-1248P-201ENST00000391096 64 ntBASIC1.98□□□□□ -2.09
LRFN1Q9P244 AC245047.3-201ENST00000429428 127 ntBASIC1.98□□□□□ -2.09
LRFN1Q9P244 MTCO1P5-201ENST00000433573 344 ntBASIC1.98□□□□□ -2.09
LRFN1Q9P244 AC090255.1-201ENST00000495779 349 ntBASIC1.98□□□□□ -2.09
LRFN1Q9P244 Y_RNA.673-201ENST00000516306 88 ntBASIC1.98□□□□□ -2.09
LRFN1Q9P244 RNU6-1337P-201ENST00000516525 95 ntBASIC1.98□□□□□ -2.09
LRFN1Q9P244 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms