Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 MIR4662B-201ENST00000579498 81 ntBASIC2.89□□□□□ -1.95
UBP1Q9NZI7 AP006437.1-201ENST00000641440 3685 ntBASIC2.89□□□□□ -1.95
UBP1Q9NZI7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
UBP1Q9NZI7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.88□□□□□ -1.95
UBP1Q9NZI7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.88□□□□□ -1.95
UBP1Q9NZI7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
UBP1Q9NZI7 RNU6-199P-201ENST00000362954 107 ntBASIC2.88□□□□□ -1.95
UBP1Q9NZI7 SNORD115-3-201ENST00000363100 82 ntBASIC2.88□□□□□ -1.95
UBP1Q9NZI7 SNORA33-201ENST00000363664 130 ntBASIC2.88□□□□□ -1.95
UBP1Q9NZI7 RNU4-11P-201ENST00000365287 132 ntBASIC2.88□□□□□ -1.95
UBP1Q9NZI7 Y_RNA.393-201ENST00000383936 102 ntBASIC2.88□□□□□ -1.95
UBP1Q9NZI7 RNU6-484P-201ENST00000384016 107 ntBASIC2.88□□□□□ -1.95
UBP1Q9NZI7 Y_RNA.497-201ENST00000384447 98 ntBASIC2.88□□□□□ -1.95
UBP1Q9NZI7 Y_RNA.521-201ENST00000384560 114 ntBASIC2.88□□□□□ -1.95
UBP1Q9NZI7 MIR181B1-201ENST00000385240 110 ntBASIC2.88□□□□□ -1.95
UBP1Q9NZI7 MIR513C-201ENST00000401352 84 ntBASIC2.88□□□□□ -1.95
UBP1Q9NZI7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.88□□□□□ -1.95
UBP1Q9NZI7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.88□□□□□ -1.95
UBP1Q9NZI7 RNU6-1291P-201ENST00000516591 104 ntBASIC2.88□□□□□ -1.95
UBP1Q9NZI7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.88□□□□□ -1.95
UBP1Q9NZI7 MIR378D2-201ENST00000580636 98 ntBASIC2.88□□□□□ -1.95
UBP1Q9NZI7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.88□□□□□ -1.95
UBP1Q9NZI7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.88□□□□□ -1.95
UBP1Q9NZI7 Y_RNA.242-201ENST00000364473 110 ntBASIC2.87□□□□□ -1.95
UBP1Q9NZI7 Y_RNA.267-201ENST00000364679 109 ntBASIC2.87□□□□□ -1.95
UBP1Q9NZI7 RNU6-1138P-201ENST00000365359 106 ntBASIC2.87□□□□□ -1.95
UBP1Q9NZI7 RNU6-81P-201ENST00000365608 104 ntBASIC2.87□□□□□ -1.95
UBP1Q9NZI7 SNORA44-201ENST00000384584 132 ntBASIC2.87□□□□□ -1.95
UBP1Q9NZI7 NDUFB4P4-201ENST00000404822 243 ntBASIC2.87□□□□□ -1.95
UBP1Q9NZI7 AL139132.1-201ENST00000431587 344 ntBASIC2.87□□□□□ -1.95
UBP1Q9NZI7 S100A11P2-201ENST00000467589 312 ntBASIC2.87□□□□□ -1.95
UBP1Q9NZI7 OR9P1P-201ENST00000496431 281 ntBASIC2.87□□□□□ -1.95
UBP1Q9NZI7 AL163195.1-201ENST00000496941 348 ntBASIC2.87□□□□□ -1.95
UBP1Q9NZI7 AC107016.2-201ENST00000547968 190 ntBASIC2.87□□□□□ -1.95
UBP1Q9NZI7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.87□□□□□ -1.95
UBP1Q9NZI7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.87□□□□□ -1.95
UBP1Q9NZI7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
UBP1Q9NZI7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
UBP1Q9NZI7 Y_RNA.253-201ENST00000364562 112 ntBASIC2.86□□□□□ -1.95
UBP1Q9NZI7 RNU6-597P-201ENST00000365620 102 ntBASIC2.86□□□□□ -1.95
UBP1Q9NZI7 MIR569-201ENST00000385228 96 ntBASIC2.86□□□□□ -1.95
UBP1Q9NZI7 SNORD37.2-201ENST00000391075 66 ntBASIC2.86□□□□□ -1.95
UBP1Q9NZI7 RN7SKP123-201ENST00000410732 291 ntBASIC2.86□□□□□ -1.95
UBP1Q9NZI7 RPL30P13-201ENST00000418873 348 ntBASIC2.86□□□□□ -1.95
UBP1Q9NZI7 AC099677.2-201ENST00000436385 175 ntBASIC2.86□□□□□ -1.95
UBP1Q9NZI7 AC003982.1-202ENST00000469928 248 ntBASIC2.86□□□□□ -1.95
UBP1Q9NZI7 RNA5SP385-201ENST00000515947 110 ntBASIC2.86□□□□□ -1.95
UBP1Q9NZI7 Y_RNA.714-201ENST00000517065 90 ntBASIC2.86□□□□□ -1.95
UBP1Q9NZI7 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.86□□□□□ -1.95
UBP1Q9NZI7 AC022202.1-201ENST00000613515 211 ntBASIC2.86□□□□□ -1.95
UBP1Q9NZI7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.86□□□□□ -1.95
UBP1Q9NZI7 MIR6844-201ENST00000637122 62 ntBASIC2.86□□□□□ -1.95
UBP1Q9NZI7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
UBP1Q9NZI7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
UBP1Q9NZI7 RNU6-131P-201ENST00000391144 107 ntBASIC2.85□□□□□ -1.95
UBP1Q9NZI7 AC112693.2-201ENST00000556538 232 ntBASIC2.85□□□□□ -1.95
UBP1Q9NZI7 AC087685.1-201ENST00000587507 141 ntBASIC2.85□□□□□ -1.95
UBP1Q9NZI7 ZNF861P-201ENST00000588126 639 ntBASIC2.85□□□□□ -1.95
UBP1Q9NZI7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.85□□□□□ -1.95
UBP1Q9NZI7 MIR3658-201ENST00000636291 56 ntBASIC2.85□□□□□ -1.95
UBP1Q9NZI7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
UBP1Q9NZI7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
UBP1Q9NZI7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
UBP1Q9NZI7 RNU6-851P-201ENST00000384565 107 ntBASIC2.84□□□□□ -1.95
UBP1Q9NZI7 RNU2-70P-201ENST00000410718 179 ntBASIC2.84□□□□□ -1.95
UBP1Q9NZI7 RNA5SP344-201ENST00000411081 104 ntBASIC2.84□□□□□ -1.95
UBP1Q9NZI7 SNRPGP10-201ENST00000432323 225 ntBASIC2.84□□□□□ -1.95
UBP1Q9NZI7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.84□□□□□ -1.95
UBP1Q9NZI7 RNU7-149P-201ENST00000516739 59 ntBASIC2.84□□□□□ -1.95
UBP1Q9NZI7 AC097639.2-201ENST00000603159 172 ntBASIC2.84□□□□□ -1.95
UBP1Q9NZI7 AC022513.1-201ENST00000624512 117 ntBASIC2.84□□□□□ -1.95
UBP1Q9NZI7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
UBP1Q9NZI7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.84□□□□□ -1.96
UBP1Q9NZI7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
UBP1Q9NZI7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.83□□□□□ -1.96
UBP1Q9NZI7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
UBP1Q9NZI7 Z82195.2-201ENST00000612348 18351 ntBASIC2.83□□□□□ -1.96
UBP1Q9NZI7 RNU6-768P-201ENST00000384683 107 ntBASIC2.83□□□□□ -1.96
UBP1Q9NZI7 RNA5SP465-201ENST00000391195 109 ntBASIC2.83□□□□□ -1.96
UBP1Q9NZI7 SNORA75.5-201ENST00000391291 81 ntBASIC2.83□□□□□ -1.96
UBP1Q9NZI7 BX510359.4-201ENST00000423750 193 ntBASIC2.83□□□□□ -1.96
UBP1Q9NZI7 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.83□□□□□ -1.96
UBP1Q9NZI7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.83□□□□□ -1.96
UBP1Q9NZI7 AL049830.1-201ENST00000468034 425 ntBASIC2.83□□□□□ -1.96
UBP1Q9NZI7 RN7SL297P-201ENST00000483161 293 ntBASIC2.83□□□□□ -1.96
UBP1Q9NZI7 RNU6-426P-201ENST00000516464 97 ntBASIC2.83□□□□□ -1.96
UBP1Q9NZI7 RNU2-56P-201ENST00000516826 190 ntBASIC2.83□□□□□ -1.96
UBP1Q9NZI7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.83□□□□□ -1.96
UBP1Q9NZI7 MIR4658-201ENST00000584344 65 ntBASIC2.83□□□□□ -1.96
UBP1Q9NZI7 AC069114.2-201ENST00000604699 304 ntBASIC2.83□□□□□ -1.96
UBP1Q9NZI7 Pinc.1-201ENST00000616452 154 ntBASIC2.83□□□□□ -1.96
UBP1Q9NZI7 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.83□□□□□ -1.96
UBP1Q9NZI7 AC091895.1-201ENST00000624494 256 ntBASIC2.83□□□□□ -1.96
UBP1Q9NZI7 AL137790.1-201ENST00000634283 177 ntBASIC2.83□□□□□ -1.96
UBP1Q9NZI7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
UBP1Q9NZI7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
UBP1Q9NZI7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
UBP1Q9NZI7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
UBP1Q9NZI7 AC096644.4-201ENST00000563417 2912 ntBASIC2.82□□□□□ -1.96
UBP1Q9NZI7 SNORA1B-201ENST00000362535 133 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms