Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 Y_RNA.341-201ENST00000365341 102 ntBASIC2.26□□□□□ -2.05
DDX56Q9NY93 RNA5SP511-201ENST00000410487 115 ntBASIC2.26□□□□□ -2.05
DDX56Q9NY93 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.26□□□□□ -2.05
DDX56Q9NY93 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.26□□□□□ -2.05
DDX56Q9NY93 U8.19-201ENST00000459095 133 ntBASIC2.26□□□□□ -2.05
DDX56Q9NY93 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.26□□□□□ -2.05
DDX56Q9NY93 AC015720.1-201ENST00000565251 277 ntBASIC2.26□□□□□ -2.05
DDX56Q9NY93 AC091178.2-201ENST00000584401 117 ntBASIC2.26□□□□□ -2.05
DDX56Q9NY93 AL929325.1-201ENST00000603096 117 ntBASIC2.26□□□□□ -2.05
DDX56Q9NY93 AC005972.2-201ENST00000604690 348 ntBASIC2.26□□□□□ -2.05
DDX56Q9NY93 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.26□□□□□ -2.05
DDX56Q9NY93 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
DDX56Q9NY93 Y_RNA.265-201ENST00000364677 108 ntBASIC2.25□□□□□ -2.05
DDX56Q9NY93 RNA5SP37-201ENST00000365420 130 ntBASIC2.25□□□□□ -2.05
DDX56Q9NY93 Y_RNA.556-201ENST00000384677 113 ntBASIC2.25□□□□□ -2.05
DDX56Q9NY93 AC233266.1-201ENST00000454518 96 ntBASIC2.25□□□□□ -2.05
DDX56Q9NY93 AC008834.1-201ENST00000511612 175 ntBASIC2.25□□□□□ -2.05
DDX56Q9NY93 SERF1AP1-201ENST00000514575 187 ntBASIC2.25□□□□□ -2.05
DDX56Q9NY93 RNU6-191P-201ENST00000516295 94 ntBASIC2.25□□□□□ -2.05
DDX56Q9NY93 SCARNA16.3-201ENST00000516595 184 ntBASIC2.25□□□□□ -2.05
DDX56Q9NY93 MIR3149-201ENST00000584629 83 ntBASIC2.25□□□□□ -2.05
DDX56Q9NY93 AC242852.1-201ENST00000612151 96 ntBASIC2.25□□□□□ -2.05
DDX56Q9NY93 AC244015.1-201ENST00000622301 99 ntBASIC2.25□□□□□ -2.05
DDX56Q9NY93 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.25□□□□□ -2.05
DDX56Q9NY93 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
DDX56Q9NY93 AC100821.1-201ENST00000523153 2479 ntBASIC2.24□□□□□ -2.05
DDX56Q9NY93 Y_RNA.193-201ENST00000363979 102 ntBASIC2.24□□□□□ -2.05
DDX56Q9NY93 Y_RNA.288-201ENST00000364854 92 ntBASIC2.24□□□□□ -2.05
DDX56Q9NY93 Y_RNA.368-201ENST00000365547 113 ntBASIC2.24□□□□□ -2.05
DDX56Q9NY93 RNU6-439P-201ENST00000384188 106 ntBASIC2.24□□□□□ -2.05
DDX56Q9NY93 Y_RNA.452-201ENST00000384202 108 ntBASIC2.24□□□□□ -2.05
DDX56Q9NY93 SNORD116-13-201ENST00000384408 92 ntBASIC2.24□□□□□ -2.05
DDX56Q9NY93 RNU6-1031P-201ENST00000384773 107 ntBASIC2.24□□□□□ -2.05
DDX56Q9NY93 RPS20P10-201ENST00000451209 253 ntBASIC2.24□□□□□ -2.05
DDX56Q9NY93 snoU13.9-201ENST00000458927 103 ntBASIC2.24□□□□□ -2.05
DDX56Q9NY93 MIR5002-201ENST00000584713 97 ntBASIC2.24□□□□□ -2.05
DDX56Q9NY93 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.24□□□□□ -2.05
DDX56Q9NY93 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
DDX56Q9NY93 SNORA25.1-201ENST00000362326 128 ntBASIC2.23□□□□□ -2.05
DDX56Q9NY93 RNU4-52P-201ENST00000384209 138 ntBASIC2.23□□□□□ -2.05
DDX56Q9NY93 RNU6-301P-201ENST00000384277 107 ntBASIC2.23□□□□□ -2.05
DDX56Q9NY93 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.23□□□□□ -2.05
DDX56Q9NY93 AL135790.2-201ENST00000437701 267 ntBASIC2.23□□□□□ -2.05
DDX56Q9NY93 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.23□□□□□ -2.05
DDX56Q9NY93 HMGN2P23-201ENST00000456759 269 ntBASIC2.23□□□□□ -2.05
DDX56Q9NY93 SNORD127-201ENST00000458892 86 ntBASIC2.23□□□□□ -2.05
DDX56Q9NY93 RNU6-1291P-201ENST00000516591 104 ntBASIC2.23□□□□□ -2.05
DDX56Q9NY93 RNU7-116P-201ENST00000516940 62 ntBASIC2.23□□□□□ -2.05
DDX56Q9NY93 MIR4672-201ENST00000583126 81 ntBASIC2.23□□□□□ -2.05
DDX56Q9NY93 AL512605.2-201ENST00000592972 256 ntBASIC2.23□□□□□ -2.05
DDX56Q9NY93 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
DDX56Q9NY93 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
DDX56Q9NY93 RNU6-702P-201ENST00000364982 107 ntBASIC2.22□□□□□ -2.05
DDX56Q9NY93 RNU6-514P-201ENST00000384208 107 ntBASIC2.22□□□□□ -2.05
DDX56Q9NY93 SNORA67.3-201ENST00000384366 140 ntBASIC2.22□□□□□ -2.05
DDX56Q9NY93 RNA5SP482-201ENST00000391269 118 ntBASIC2.22□□□□□ -2.05
DDX56Q9NY93 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.22□□□□□ -2.05
DDX56Q9NY93 RNU2-38P-201ENST00000410856 79 ntBASIC2.22□□□□□ -2.05
DDX56Q9NY93 RN7SKP192-201ENST00000411291 327 ntBASIC2.22□□□□□ -2.05
DDX56Q9NY93 SNORA59A-201ENST00000459326 152 ntBASIC2.22□□□□□ -2.05
DDX56Q9NY93 AC025033.1-201ENST00000463883 194 ntBASIC2.22□□□□□ -2.05
DDX56Q9NY93 AL049830.1-201ENST00000468034 425 ntBASIC2.22□□□□□ -2.05
DDX56Q9NY93 AC091959.1-201ENST00000495857 238 ntBASIC2.22□□□□□ -2.05
DDX56Q9NY93 Y_RNA.668-201ENST00000516233 93 ntBASIC2.22□□□□□ -2.05
DDX56Q9NY93 SNORA31.10-201ENST00000516482 106 ntBASIC2.22□□□□□ -2.05
DDX56Q9NY93 MIR4448-201ENST00000584360 86 ntBASIC2.22□□□□□ -2.05
DDX56Q9NY93 AC004832.4-201ENST00000608952 331 ntBASIC2.22□□□□□ -2.05
DDX56Q9NY93 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
DDX56Q9NY93 MIR335-201ENST00000362173 94 ntBASIC2.21□□□□□ -2.06
DDX56Q9NY93 RNU6-1123P-201ENST00000362347 106 ntBASIC2.21□□□□□ -2.06
DDX56Q9NY93 Y_RNA.310-201ENST00000365063 113 ntBASIC2.21□□□□□ -2.06
DDX56Q9NY93 Y_RNA.500-201ENST00000384466 111 ntBASIC2.21□□□□□ -2.06
DDX56Q9NY93 RNU4-53P-201ENST00000410828 140 ntBASIC2.21□□□□□ -2.06
DDX56Q9NY93 Y_RNA.621-201ENST00000411065 96 ntBASIC2.21□□□□□ -2.06
DDX56Q9NY93 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.21□□□□□ -2.06
DDX56Q9NY93 HSPE1P21-201ENST00000438283 308 ntBASIC2.21□□□□□ -2.06
DDX56Q9NY93 STAG3L5P-204ENST00000443759 179 ntBASIC2.21□□□□□ -2.06
DDX56Q9NY93 PGBD4P5-201ENST00000445958 426 ntBASIC2.21□□□□□ -2.06
DDX56Q9NY93 RNU1-40P-201ENST00000516816 164 ntBASIC2.21□□□□□ -2.06
DDX56Q9NY93 RNU1-97P-201ENST00000516872 164 ntBASIC2.21□□□□□ -2.06
DDX56Q9NY93 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.21□□□□□ -2.06
DDX56Q9NY93 AC012433.1-201ENST00000588916 398 ntBASIC2.21□□□□□ -2.06
DDX56Q9NY93 MIR6852-201ENST00000621699 66 ntBASIC2.21□□□□□ -2.06
DDX56Q9NY93 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
DDX56Q9NY93 RNU6-662P-201ENST00000384253 104 ntBASIC2.2□□□□□ -2.06
DDX56Q9NY93 Y_RNA.518-201ENST00000384552 113 ntBASIC2.2□□□□□ -2.06
DDX56Q9NY93 RPL30P13-201ENST00000418873 348 ntBASIC2.2□□□□□ -2.06
DDX56Q9NY93 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.2□□□□□ -2.06
DDX56Q9NY93 RPS4XP11-201ENST00000446897 772 ntBASIC2.2□□□□□ -2.06
DDX56Q9NY93 RNU6-1132P-201ENST00000459214 107 ntBASIC2.2□□□□□ -2.06
DDX56Q9NY93 SNORA27.4-201ENST00000516650 95 ntBASIC2.2□□□□□ -2.06
DDX56Q9NY93 AC073349.3-201ENST00000617616 186 ntBASIC2.2□□□□□ -2.06
DDX56Q9NY93 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.19□□□□□ -2.06
DDX56Q9NY93 Y_RNA.14-201ENST00000362415 103 ntBASIC2.19□□□□□ -2.06
DDX56Q9NY93 SNORA1B-201ENST00000362535 133 ntBASIC2.19□□□□□ -2.06
DDX56Q9NY93 RNU6-801P-201ENST00000364087 105 ntBASIC2.19□□□□□ -2.06
DDX56Q9NY93 RNU6-1323P-201ENST00000384025 107 ntBASIC2.19□□□□□ -2.06
DDX56Q9NY93 SNORA72-201ENST00000384339 132 ntBASIC2.19□□□□□ -2.06
DDX56Q9NY93 MIR934-201ENST00000401241 83 ntBASIC2.19□□□□□ -2.06
DDX56Q9NY93 AL021397.1-201ENST00000451806 248 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 200.1 ms