Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 AC025253.1-201ENST00000613623 543 ntBASIC0.95□□□□□ -2.26
SMPD3Q9NY59 AC004467.1-201ENST00000615678 330 ntBASIC0.95□□□□□ -2.26
SMPD3Q9NY59 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.95□□□□□ -2.26
SMPD3Q9NY59 AC244015.1-201ENST00000622301 99 ntBASIC0.95□□□□□ -2.26
SMPD3Q9NY59 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
SMPD3Q9NY59 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SMPD3Q9NY59 AC005592.1-201ENST00000566527 1640 ntBASIC0.94□□□□□ -2.26
SMPD3Q9NY59 Y_RNA.164-201ENST00000363709 102 ntBASIC0.94□□□□□ -2.26
SMPD3Q9NY59 RNU6-961P-201ENST00000363893 105 ntBASIC0.94□□□□□ -2.26
SMPD3Q9NY59 Y_RNA.238-201ENST00000364441 102 ntBASIC0.94□□□□□ -2.26
SMPD3Q9NY59 RNU6-1297P-201ENST00000384415 104 ntBASIC0.94□□□□□ -2.26
SMPD3Q9NY59 RNU6-136P-201ENST00000384663 107 ntBASIC0.94□□□□□ -2.26
SMPD3Q9NY59 RNU6-910P-201ENST00000390844 107 ntBASIC0.94□□□□□ -2.26
SMPD3Q9NY59 RNU5A-5P-201ENST00000411054 116 ntBASIC0.94□□□□□ -2.26
SMPD3Q9NY59 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.94□□□□□ -2.26
SMPD3Q9NY59 AC245047.7-201ENST00000440265 293 ntBASIC0.94□□□□□ -2.26
SMPD3Q9NY59 FCF1P4-201ENST00000448326 183 ntBASIC0.94□□□□□ -2.26
SMPD3Q9NY59 MTCO3P10-201ENST00000455912 772 ntBASIC0.94□□□□□ -2.26
SMPD3Q9NY59 RNU7-169P-201ENST00000459456 61 ntBASIC0.94□□□□□ -2.26
SMPD3Q9NY59 AL049830.1-201ENST00000468034 425 ntBASIC0.94□□□□□ -2.26
SMPD3Q9NY59 SNORA70.12-201ENST00000516084 153 ntBASIC0.94□□□□□ -2.26
SMPD3Q9NY59 RNU6-1096P-201ENST00000517089 102 ntBASIC0.94□□□□□ -2.26
SMPD3Q9NY59 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.94□□□□□ -2.26
SMPD3Q9NY59 AC090049.2-201ENST00000550377 109 ntBASIC0.94□□□□□ -2.26
SMPD3Q9NY59 AC006380.1-201ENST00000603598 186 ntBASIC0.94□□□□□ -2.26
SMPD3Q9NY59 SNORD114-21-201ENST00000606412 72 ntBASIC0.94□□□□□ -2.26
SMPD3Q9NY59 snoU13.31-201ENST00000607291 104 ntBASIC0.94□□□□□ -2.26
SMPD3Q9NY59 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
SMPD3Q9NY59 SNORD115-30-201ENST00000364117 82 ntBASIC0.93□□□□□ -2.26
SMPD3Q9NY59 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
SMPD3Q9NY59 SNORD114-24-201ENST00000365029 72 ntBASIC0.93□□□□□ -2.26
SMPD3Q9NY59 Y_RNA.314-201ENST00000365114 102 ntBASIC0.93□□□□□ -2.26
SMPD3Q9NY59 RNU1-36P-201ENST00000365130 165 ntBASIC0.93□□□□□ -2.26
SMPD3Q9NY59 RNY3P4-201ENST00000384428 101 ntBASIC0.93□□□□□ -2.26
SMPD3Q9NY59 MIR200A-201ENST00000384875 90 ntBASIC0.93□□□□□ -2.26
SMPD3Q9NY59 MIR628-201ENST00000385229 95 ntBASIC0.93□□□□□ -2.26
SMPD3Q9NY59 AL451046.2-201ENST00000403074 277 ntBASIC0.93□□□□□ -2.26
SMPD3Q9NY59 RBMX2P4-201ENST00000441256 376 ntBASIC0.93□□□□□ -2.26
SMPD3Q9NY59 RPL39P39-201ENST00000455840 151 ntBASIC0.93□□□□□ -2.26
SMPD3Q9NY59 AC093852.1-201ENST00000503587 266 ntBASIC0.93□□□□□ -2.26
SMPD3Q9NY59 RNU7-12P-201ENST00000516030 62 ntBASIC0.93□□□□□ -2.26
SMPD3Q9NY59 RNU6-63P-201ENST00000516690 95 ntBASIC0.93□□□□□ -2.26
SMPD3Q9NY59 RNU2-12P-201ENST00000517216 168 ntBASIC0.93□□□□□ -2.26
SMPD3Q9NY59 AL358944.1-201ENST00000528537 144 ntBASIC0.93□□□□□ -2.26
SMPD3Q9NY59 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.93□□□□□ -2.26
SMPD3Q9NY59 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.93□□□□□ -2.26
SMPD3Q9NY59 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
SMPD3Q9NY59 Y_RNA.142-201ENST00000363491 102 ntBASIC0.92□□□□□ -2.26
SMPD3Q9NY59 RNY3P11-201ENST00000364153 102 ntBASIC0.92□□□□□ -2.26
SMPD3Q9NY59 Y_RNA.259-201ENST00000364619 101 ntBASIC0.92□□□□□ -2.26
SMPD3Q9NY59 Y_RNA.361-201ENST00000365515 120 ntBASIC0.92□□□□□ -2.26
SMPD3Q9NY59 SNORD78.2-201ENST00000391076 69 ntBASIC0.92□□□□□ -2.26
SMPD3Q9NY59 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.92□□□□□ -2.26
SMPD3Q9NY59 AC093850.1-201ENST00000454121 251 ntBASIC0.92□□□□□ -2.26
SMPD3Q9NY59 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.92□□□□□ -2.26
SMPD3Q9NY59 RNY1P10-201ENST00000363268 113 ntBASIC0.91□□□□□ -2.26
SMPD3Q9NY59 SNORA2.2-201ENST00000365473 135 ntBASIC0.91□□□□□ -2.26
SMPD3Q9NY59 Y_RNA.384-201ENST00000383909 102 ntBASIC0.91□□□□□ -2.26
SMPD3Q9NY59 Y_RNA.387-201ENST00000383918 102 ntBASIC0.91□□□□□ -2.26
SMPD3Q9NY59 Y_RNA.390-201ENST00000383932 102 ntBASIC0.91□□□□□ -2.26
SMPD3Q9NY59 MRPS18CP6-201ENST00000423587 223 ntBASIC0.91□□□□□ -2.26
SMPD3Q9NY59 AC099799.1-201ENST00000439809 192 ntBASIC0.91□□□□□ -2.26
SMPD3Q9NY59 ELOCP24-201ENST00000456370 334 ntBASIC0.91□□□□□ -2.26
SMPD3Q9NY59 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.91□□□□□ -2.26
SMPD3Q9NY59 AC048334.1-201ENST00000477975 159 ntBASIC0.91□□□□□ -2.26
SMPD3Q9NY59 AC055872.1-201ENST00000570978 278 ntBASIC0.91□□□□□ -2.26
SMPD3Q9NY59 AC005176.2-201ENST00000596933 147 ntBASIC0.91□□□□□ -2.26
SMPD3Q9NY59 U2.1-201ENST00000618978 145 ntBASIC0.91□□□□□ -2.26
SMPD3Q9NY59 MTND4LP32-201ENST00000636111 270 ntBASIC0.91□□□□□ -2.26
SMPD3Q9NY59 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
SMPD3Q9NY59 MIRLET7C-201ENST00000362160 84 ntBASIC0.9□□□□□ -2.27
SMPD3Q9NY59 RNU6-490P-201ENST00000362985 107 ntBASIC0.9□□□□□ -2.27
SMPD3Q9NY59 RNU4-41P-201ENST00000364426 143 ntBASIC0.9□□□□□ -2.27
SMPD3Q9NY59 SNORD41-201ENST00000386967 70 ntBASIC0.9□□□□□ -2.27
SMPD3Q9NY59 AL031003.1-201ENST00000404229 172 ntBASIC0.9□□□□□ -2.27
SMPD3Q9NY59 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.9□□□□□ -2.27
SMPD3Q9NY59 RNU2-54P-201ENST00000410299 190 ntBASIC0.9□□□□□ -2.27
SMPD3Q9NY59 RNA5SP511-201ENST00000410487 115 ntBASIC0.9□□□□□ -2.27
SMPD3Q9NY59 AL354751.2-201ENST00000415471 210 ntBASIC0.9□□□□□ -2.27
SMPD3Q9NY59 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.9□□□□□ -2.27
SMPD3Q9NY59 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
SMPD3Q9NY59 SNORD79.1-201ENST00000516069 84 ntBASIC0.9□□□□□ -2.27
SMPD3Q9NY59 RNU6-947P-201ENST00000516264 106 ntBASIC0.9□□□□□ -2.27
SMPD3Q9NY59 RNU6-917P-201ENST00000516294 104 ntBASIC0.9□□□□□ -2.27
SMPD3Q9NY59 RNU6-1337P-201ENST00000516525 95 ntBASIC0.9□□□□□ -2.27
SMPD3Q9NY59 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.9□□□□□ -2.27
SMPD3Q9NY59 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.9□□□□□ -2.27
SMPD3Q9NY59 AL117336.2-201ENST00000602435 335 ntBASIC0.9□□□□□ -2.27
SMPD3Q9NY59 AL020996.3-201ENST00000606617 222 ntBASIC0.9□□□□□ -2.27
SMPD3Q9NY59 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SMPD3Q9NY59 Y_RNA.101-201ENST00000363154 102 ntBASIC0.89□□□□□ -2.27
SMPD3Q9NY59 RNU4-38P-201ENST00000364472 129 ntBASIC0.89□□□□□ -2.27
SMPD3Q9NY59 SNORA80D-201ENST00000384488 135 ntBASIC0.89□□□□□ -2.27
SMPD3Q9NY59 MIR559-201ENST00000385188 96 ntBASIC0.89□□□□□ -2.27
SMPD3Q9NY59 RNY4P36-201ENST00000391116 96 ntBASIC0.89□□□□□ -2.27
SMPD3Q9NY59 Y_RNA.621-201ENST00000411065 96 ntBASIC0.89□□□□□ -2.27
SMPD3Q9NY59 RNU2-64P-201ENST00000411315 191 ntBASIC0.89□□□□□ -2.27
SMPD3Q9NY59 AL162725.1-201ENST00000435405 301 ntBASIC0.89□□□□□ -2.27
SMPD3Q9NY59 Z98949.2-201ENST00000440996 144 ntBASIC0.89□□□□□ -2.27
SMPD3Q9NY59 RNU6-277P-201ENST00000516272 106 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms