Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MTND2P29-201ENST00000438595 412 ntBASIC1.54□□□□□ -2.16
NDE1Q9NXR1 RPS26P55-201ENST00000471178 356 ntBASIC1.54□□□□□ -2.16
NDE1Q9NXR1 AC023790.1-201ENST00000482174 347 ntBASIC1.54□□□□□ -2.16
NDE1Q9NXR1 AL163195.1-201ENST00000496941 348 ntBASIC1.54□□□□□ -2.16
NDE1Q9NXR1 SEPT14P8-201ENST00000508026 178 ntBASIC1.54□□□□□ -2.16
NDE1Q9NXR1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.54□□□□□ -2.16
NDE1Q9NXR1 AC084364.2-201ENST00000546924 395 ntBASIC1.54□□□□□ -2.16
NDE1Q9NXR1 AC069114.2-201ENST00000604699 304 ntBASIC1.54□□□□□ -2.16
NDE1Q9NXR1 SNORD113-5-201ENST00000607261 78 ntBASIC1.54□□□□□ -2.16
NDE1Q9NXR1 U6.73-201ENST00000619194 103 ntBASIC1.54□□□□□ -2.16
NDE1Q9NXR1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
NDE1Q9NXR1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.84-201ENST00000363011 104 ntBASIC1.53□□□□□ -2.16
NDE1Q9NXR1 RNU4-80P-201ENST00000363200 141 ntBASIC1.53□□□□□ -2.16
NDE1Q9NXR1 RNU1-22P-201ENST00000363334 158 ntBASIC1.53□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.133-201ENST00000363428 110 ntBASIC1.53□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.361-201ENST00000365515 120 ntBASIC1.53□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.418-201ENST00000384029 102 ntBASIC1.53□□□□□ -2.16
NDE1Q9NXR1 SNORD116-13-201ENST00000384408 92 ntBASIC1.53□□□□□ -2.16
NDE1Q9NXR1 RNU6-713P-201ENST00000384761 107 ntBASIC1.53□□□□□ -2.16
NDE1Q9NXR1 MIR568-201ENST00000385036 95 ntBASIC1.53□□□□□ -2.16
NDE1Q9NXR1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.53□□□□□ -2.16
NDE1Q9NXR1 AL390729.2-201ENST00000416137 156 ntBASIC1.53□□□□□ -2.16
NDE1Q9NXR1 AL606517.2-201ENST00000442855 241 ntBASIC1.53□□□□□ -2.16
NDE1Q9NXR1 HMGN1P10-201ENST00000474557 553 ntBASIC1.53□□□□□ -2.16
NDE1Q9NXR1 AC008834.1-201ENST00000511612 175 ntBASIC1.53□□□□□ -2.16
NDE1Q9NXR1 AC097462.1-201ENST00000514125 324 ntBASIC1.53□□□□□ -2.16
NDE1Q9NXR1 RNU6-1337P-201ENST00000516525 95 ntBASIC1.53□□□□□ -2.16
NDE1Q9NXR1 RNU7-172P-201ENST00000517125 64 ntBASIC1.53□□□□□ -2.16
NDE1Q9NXR1 AC110588.1-201ENST00000559699 137 ntBASIC1.53□□□□□ -2.16
NDE1Q9NXR1 AC073413.2-201ENST00000604332 360 ntBASIC1.53□□□□□ -2.16
NDE1Q9NXR1 AL359075.3-201ENST00000613288 217 ntBASIC1.53□□□□□ -2.16
NDE1Q9NXR1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.53□□□□□ -2.16
NDE1Q9NXR1 WWP1P1-201ENST00000466609 2769 ntBASIC1.53□□□□□ -2.17
NDE1Q9NXR1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.52□□□□□ -2.17
NDE1Q9NXR1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
NDE1Q9NXR1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.52□□□□□ -2.17
NDE1Q9NXR1 Y_RNA.176-201ENST00000363815 109 ntBASIC1.52□□□□□ -2.17
NDE1Q9NXR1 RNU6-271P-201ENST00000363858 105 ntBASIC1.52□□□□□ -2.17
NDE1Q9NXR1 Y_RNA.376-201ENST00000365638 108 ntBASIC1.52□□□□□ -2.17
NDE1Q9NXR1 Y_RNA.396-201ENST00000383949 103 ntBASIC1.52□□□□□ -2.17
NDE1Q9NXR1 Y_RNA.483-201ENST00000384380 101 ntBASIC1.52□□□□□ -2.17
NDE1Q9NXR1 MT-TW-201ENST00000387382 68 ntBASIC1.52□□□□□ -2.17
NDE1Q9NXR1 RNA5SP109-201ENST00000391010 116 ntBASIC1.52□□□□□ -2.17
NDE1Q9NXR1 RNU2-61P-201ENST00000411069 191 ntBASIC1.52□□□□□ -2.17
NDE1Q9NXR1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.52□□□□□ -2.17
NDE1Q9NXR1 HMGN2P23-201ENST00000456759 269 ntBASIC1.52□□□□□ -2.17
NDE1Q9NXR1 Y_RNA.673-201ENST00000516306 88 ntBASIC1.52□□□□□ -2.17
NDE1Q9NXR1 RNU1-142P-201ENST00000516682 145 ntBASIC1.52□□□□□ -2.17
NDE1Q9NXR1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.52□□□□□ -2.17
NDE1Q9NXR1 SUB1P4-201ENST00000566062 339 ntBASIC1.52□□□□□ -2.17
NDE1Q9NXR1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.52□□□□□ -2.17
NDE1Q9NXR1 RNU4-90P-201ENST00000362773 141 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 Y_RNA.461-201ENST00000384263 103 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 RNU6-574P-201ENST00000384265 107 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 RNU6-376P-201ENST00000384731 106 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 MIR934-201ENST00000401241 83 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 RNA5SP100-201ENST00000410903 110 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 RNA5SP59-201ENST00000410922 110 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.51□□□□□ -2.17
NDE1Q9NXR1 AL135790.2-201ENST00000437701 267 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 MTND3P2-201ENST00000438452 342 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.51□□□□□ -2.17
NDE1Q9NXR1 AC108729.3-201ENST00000513484 108 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 RNU6-1143P-201ENST00000516125 104 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 RNU6-295P-201ENST00000516901 104 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 SCARNA24.2-201ENST00000516968 130 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 RNA5SP437-201ENST00000517249 129 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 RPL21P9-201ENST00000556149 474 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 MIR3684-201ENST00000579779 74 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.51□□□□□ -2.17
NDE1Q9NXR1 PRR13P7-201ENST00000605538 430 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 AC103810.8-201ENST00000607347 118 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.51□□□□□ -2.17
NDE1Q9NXR1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 MIR8062-201ENST00000621515 85 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 AC127459.3-201ENST00000624328 466 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 AC006435.5-201ENST00000624486 112 ntBASIC1.51□□□□□ -2.17
NDE1Q9NXR1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.51□□□□□ -2.17
NDE1Q9NXR1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.5□□□□□ -2.17
NDE1Q9NXR1 Y_RNA.149-201ENST00000363558 117 ntBASIC1.5□□□□□ -2.17
NDE1Q9NXR1 RNU6-112P-201ENST00000363599 104 ntBASIC1.5□□□□□ -2.17
NDE1Q9NXR1 RNU6-1019P-201ENST00000364424 107 ntBASIC1.5□□□□□ -2.17
NDE1Q9NXR1 RNU6-290P-201ENST00000365212 101 ntBASIC1.5□□□□□ -2.17
NDE1Q9NXR1 SNORA4.2-201ENST00000365313 147 ntBASIC1.5□□□□□ -2.17
NDE1Q9NXR1 RNU6-117P-201ENST00000365415 107 ntBASIC1.5□□□□□ -2.17
NDE1Q9NXR1 Y_RNA.569-201ENST00000384749 103 ntBASIC1.5□□□□□ -2.17
NDE1Q9NXR1 RNU6-855P-201ENST00000410395 104 ntBASIC1.5□□□□□ -2.17
NDE1Q9NXR1 RNA5SP511-201ENST00000410487 115 ntBASIC1.5□□□□□ -2.17
NDE1Q9NXR1 RNU6-1203P-201ENST00000410703 110 ntBASIC1.5□□□□□ -2.17
NDE1Q9NXR1 RPL23AP63-201ENST00000498752 471 ntBASIC1.5□□□□□ -2.17
NDE1Q9NXR1 MTCO2P24-201ENST00000515611 426 ntBASIC1.5□□□□□ -2.17
NDE1Q9NXR1 SNORA70.12-201ENST00000516084 153 ntBASIC1.5□□□□□ -2.17
NDE1Q9NXR1 RNU7-99P-201ENST00000516271 62 ntBASIC1.5□□□□□ -2.17
NDE1Q9NXR1 SNORA31.17-201ENST00000516953 127 ntBASIC1.5□□□□□ -2.17
NDE1Q9NXR1 DEFB108E-201ENST00000524692 240 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 242.3 ms