Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 Y_RNA.293-201ENST00000364908 93 ntBASIC2.54□□□□□ -2
SPTLC3Q9NUV7 AC063976.3-201ENST00000426849 329 ntBASIC2.54□□□□□ -2
SPTLC3Q9NUV7 RNU6-717P-201ENST00000459076 104 ntBASIC2.54□□□□□ -2
SPTLC3Q9NUV7 RNU7-128P-201ENST00000517247 62 ntBASIC2.54□□□□□ -2
SPTLC3Q9NUV7 U4.3-201ENST00000621047 82 ntBASIC2.54□□□□□ -2
SPTLC3Q9NUV7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.54□□□□□ -2
SPTLC3Q9NUV7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SPTLC3Q9NUV7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SPTLC3Q9NUV7 RNU6-1020P-201ENST00000363684 107 ntBASIC2.53□□□□□ -2
SPTLC3Q9NUV7 SNORA8.3-201ENST00000384679 139 ntBASIC2.53□□□□□ -2
SPTLC3Q9NUV7 MIR526A2-201ENST00000390198 65 ntBASIC2.53□□□□□ -2
SPTLC3Q9NUV7 AL359511.1-201ENST00000402970 211 ntBASIC2.53□□□□□ -2
SPTLC3Q9NUV7 MIR1283-2-201ENST00000408621 87 ntBASIC2.53□□□□□ -2
SPTLC3Q9NUV7 SNORA36B-201ENST00000410438 131 ntBASIC2.53□□□□□ -2
SPTLC3Q9NUV7 AC099677.2-201ENST00000436385 175 ntBASIC2.53□□□□□ -2
SPTLC3Q9NUV7 AC108938.1-201ENST00000451204 136 ntBASIC2.53□□□□□ -2
SPTLC3Q9NUV7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.53□□□□□ -2
SPTLC3Q9NUV7 RPS26P45-201ENST00000471748 340 ntBASIC2.53□□□□□ -2
SPTLC3Q9NUV7 AC026436.1-201ENST00000510537 270 ntBASIC2.53□□□□□ -2
SPTLC3Q9NUV7 AC100767.1-201ENST00000528178 123 ntBASIC2.53□□□□□ -2
SPTLC3Q9NUV7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SPTLC3Q9NUV7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.53□□□□□ -2
SPTLC3Q9NUV7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.53□□□□□ -2
SPTLC3Q9NUV7 MIR4319-201ENST00000577285 85 ntBASIC2.53□□□□□ -2
SPTLC3Q9NUV7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.53□□□□□ -2
SPTLC3Q9NUV7 MIR5002-201ENST00000584713 97 ntBASIC2.53□□□□□ -2
SPTLC3Q9NUV7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.53□□□□□ -2
SPTLC3Q9NUV7 Y_RNA.802-201ENST00000614892 130 ntBASIC2.53□□□□□ -2
SPTLC3Q9NUV7 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.53□□□□□ -2
SPTLC3Q9NUV7 U6.108-201ENST00000637764 58 ntBASIC2.53□□□□□ -2
SPTLC3Q9NUV7 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.53□□□□□ -2
SPTLC3Q9NUV7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SPTLC3Q9NUV7 AC245060.5-201ENST00000610778 3293 ntBASIC2.52□□□□□ -2.01
SPTLC3Q9NUV7 MIR449A-201ENST00000362113 91 ntBASIC2.52□□□□□ -2.01
SPTLC3Q9NUV7 Y_RNA.308-201ENST00000365043 101 ntBASIC2.52□□□□□ -2.01
SPTLC3Q9NUV7 SNORA8-201ENST00000384574 139 ntBASIC2.52□□□□□ -2.01
SPTLC3Q9NUV7 MIR196B-201ENST00000384852 84 ntBASIC2.52□□□□□ -2.01
SPTLC3Q9NUV7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.52□□□□□ -2.01
SPTLC3Q9NUV7 RPL23AP54-201ENST00000495129 419 ntBASIC2.52□□□□□ -2.01
SPTLC3Q9NUV7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.52□□□□□ -2.01
SPTLC3Q9NUV7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.52□□□□□ -2.01
SPTLC3Q9NUV7 AC098479.1-201ENST00000609225 154 ntBASIC2.52□□□□□ -2.01
SPTLC3Q9NUV7 AC004792.1-201ENST00000614523 137 ntBASIC2.52□□□□□ -2.01
SPTLC3Q9NUV7 AC022513.1-201ENST00000624512 117 ntBASIC2.52□□□□□ -2.01
SPTLC3Q9NUV7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
SPTLC3Q9NUV7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SPTLC3Q9NUV7 AC018630.2-201ENST00000534866 2403 ntBASIC2.51□□□□□ -2.01
SPTLC3Q9NUV7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SPTLC3Q9NUV7 SNORD114-30-201ENST00000364448 72 ntBASIC2.51□□□□□ -2.01
SPTLC3Q9NUV7 SNORA67.1-201ENST00000364749 141 ntBASIC2.51□□□□□ -2.01
SPTLC3Q9NUV7 RNA5SP138-201ENST00000365098 114 ntBASIC2.51□□□□□ -2.01
SPTLC3Q9NUV7 RNU4-17P-201ENST00000365598 141 ntBASIC2.51□□□□□ -2.01
SPTLC3Q9NUV7 RNU6-136P-201ENST00000384663 107 ntBASIC2.51□□□□□ -2.01
SPTLC3Q9NUV7 MIR626-201ENST00000385032 94 ntBASIC2.51□□□□□ -2.01
SPTLC3Q9NUV7 RPS4XP11-201ENST00000446897 772 ntBASIC2.51□□□□□ -2.01
SPTLC3Q9NUV7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.51□□□□□ -2.01
SPTLC3Q9NUV7 MIR4724-201ENST00000579485 89 ntBASIC2.51□□□□□ -2.01
SPTLC3Q9NUV7 MIR4448-201ENST00000584360 86 ntBASIC2.51□□□□□ -2.01
SPTLC3Q9NUV7 AC069114.2-201ENST00000604699 304 ntBASIC2.51□□□□□ -2.01
SPTLC3Q9NUV7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.51□□□□□ -2.01
SPTLC3Q9NUV7 MIR1291-201ENST00000627649 87 ntBASIC2.51□□□□□ -2.01
SPTLC3Q9NUV7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SPTLC3Q9NUV7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SPTLC3Q9NUV7 AC062016.1-201ENST00000355719 319 ntBASIC2.5□□□□□ -2.01
SPTLC3Q9NUV7 MIR367-201ENST00000362299 68 ntBASIC2.5□□□□□ -2.01
SPTLC3Q9NUV7 RNU6-674P-201ENST00000363831 107 ntBASIC2.5□□□□□ -2.01
SPTLC3Q9NUV7 Y_RNA.435-201ENST00000384095 112 ntBASIC2.5□□□□□ -2.01
SPTLC3Q9NUV7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SPTLC3Q9NUV7 HMGN2P3-201ENST00000433603 273 ntBASIC2.5□□□□□ -2.01
SPTLC3Q9NUV7 HMGN2P5-201ENST00000436882 273 ntBASIC2.5□□□□□ -2.01
SPTLC3Q9NUV7 AC069257.2-201ENST00000441819 155 ntBASIC2.5□□□□□ -2.01
SPTLC3Q9NUV7 RNU7-120P-201ENST00000459334 63 ntBASIC2.5□□□□□ -2.01
SPTLC3Q9NUV7 RNU6-437P-201ENST00000459408 95 ntBASIC2.5□□□□□ -2.01
SPTLC3Q9NUV7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.5□□□□□ -2.01
SPTLC3Q9NUV7 HMGB3P3-201ENST00000510526 400 ntBASIC2.5□□□□□ -2.01
SPTLC3Q9NUV7 RNU6-1096P-201ENST00000517089 102 ntBASIC2.5□□□□□ -2.01
SPTLC3Q9NUV7 RNU1-104P-201ENST00000517280 175 ntBASIC2.5□□□□□ -2.01
SPTLC3Q9NUV7 AL358944.1-201ENST00000528537 144 ntBASIC2.5□□□□□ -2.01
SPTLC3Q9NUV7 AP002392.1-201ENST00000537692 208 ntBASIC2.5□□□□□ -2.01
SPTLC3Q9NUV7 AC091178.2-201ENST00000584401 117 ntBASIC2.5□□□□□ -2.01
SPTLC3Q9NUV7 AC072026.1-201ENST00000605023 201 ntBASIC2.5□□□□□ -2.01
SPTLC3Q9NUV7 MIR6079-201ENST00000635807 62 ntBASIC2.5□□□□□ -2.01
SPTLC3Q9NUV7 AC100821.1-201ENST00000523153 2479 ntBASIC2.49□□□□□ -2.01
SPTLC3Q9NUV7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.49□□□□□ -2.01
SPTLC3Q9NUV7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.49□□□□□ -2.01
SPTLC3Q9NUV7 SNORA3A-201ENST00000364113 130 ntBASIC2.49□□□□□ -2.01
SPTLC3Q9NUV7 RNU6-1019P-201ENST00000364424 107 ntBASIC2.49□□□□□ -2.01
SPTLC3Q9NUV7 MIR597-201ENST00000384968 97 ntBASIC2.49□□□□□ -2.01
SPTLC3Q9NUV7 PIGPP3-201ENST00000425307 415 ntBASIC2.49□□□□□ -2.01
SPTLC3Q9NUV7 RN7SL429P-201ENST00000479090 223 ntBASIC2.49□□□□□ -2.01
SPTLC3Q9NUV7 RN7SL489P-201ENST00000486185 223 ntBASIC2.49□□□□□ -2.01
SPTLC3Q9NUV7 RN7SL327P-201ENST00000488659 223 ntBASIC2.49□□□□□ -2.01
SPTLC3Q9NUV7 AL163195.1-201ENST00000496941 348 ntBASIC2.49□□□□□ -2.01
SPTLC3Q9NUV7 RNU6-341P-201ENST00000516973 96 ntBASIC2.49□□□□□ -2.01
SPTLC3Q9NUV7 AC011604.1-201ENST00000545978 196 ntBASIC2.49□□□□□ -2.01
SPTLC3Q9NUV7 MIR4529-201ENST00000578110 78 ntBASIC2.49□□□□□ -2.01
SPTLC3Q9NUV7 AC103810.6-201ENST00000606708 136 ntBASIC2.49□□□□□ -2.01
SPTLC3Q9NUV7 AC046143.2-201ENST00000609789 160 ntBASIC2.49□□□□□ -2.01
SPTLC3Q9NUV7 AC245884.12-201ENST00000615364 59 ntBASIC2.49□□□□□ -2.01
SPTLC3Q9NUV7 RN7SL853P-201ENST00000617250 223 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms