Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.42□□□□□ -2.02
CCM2LQ9NUG4 AC018630.2-201ENST00000534866 2403 ntBASIC2.42□□□□□ -2.02
CCM2LQ9NUG4 AC007336.1-201ENST00000576365 3828 ntBASIC2.42□□□□□ -2.02
CCM2LQ9NUG4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCM2LQ9NUG4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCM2LQ9NUG4 MIR411-201ENST00000362239 96 ntBASIC2.41□□□□□ -2.02
CCM2LQ9NUG4 RNU6-1019P-201ENST00000364424 107 ntBASIC2.41□□□□□ -2.02
CCM2LQ9NUG4 U8.7-201ENST00000364940 136 ntBASIC2.41□□□□□ -2.02
CCM2LQ9NUG4 RNU6-144P-201ENST00000383951 107 ntBASIC2.41□□□□□ -2.02
CCM2LQ9NUG4 SNORA72-201ENST00000384339 132 ntBASIC2.41□□□□□ -2.02
CCM2LQ9NUG4 SNORA48.1-201ENST00000390879 135 ntBASIC2.41□□□□□ -2.02
CCM2LQ9NUG4 RPS4XP11-201ENST00000446897 772 ntBASIC2.41□□□□□ -2.02
CCM2LQ9NUG4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.41□□□□□ -2.02
CCM2LQ9NUG4 RNU6-138P-201ENST00000515952 107 ntBASIC2.41□□□□□ -2.02
CCM2LQ9NUG4 RNU6-1096P-201ENST00000517089 102 ntBASIC2.41□□□□□ -2.02
CCM2LQ9NUG4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CCM2LQ9NUG4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.41□□□□□ -2.02
CCM2LQ9NUG4 MIR5094-201ENST00000578766 85 ntBASIC2.41□□□□□ -2.02
CCM2LQ9NUG4 AC080100.1-201ENST00000624239 5356 ntBASIC2.4□□□□□ -2.03
CCM2LQ9NUG4 RNU1-112P-201ENST00000364401 164 ntBASIC2.4□□□□□ -2.03
CCM2LQ9NUG4 Y_RNA.293-201ENST00000364908 93 ntBASIC2.4□□□□□ -2.03
CCM2LQ9NUG4 RNU1-51P-201ENST00000365345 176 ntBASIC2.4□□□□□ -2.03
CCM2LQ9NUG4 RNU6-136P-201ENST00000384663 107 ntBASIC2.4□□□□□ -2.03
CCM2LQ9NUG4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.4□□□□□ -2.03
CCM2LQ9NUG4 AC091021.1-201ENST00000468051 388 ntBASIC2.4□□□□□ -2.03
CCM2LQ9NUG4 RPL23AP54-201ENST00000495129 419 ntBASIC2.4□□□□□ -2.03
CCM2LQ9NUG4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.4□□□□□ -2.03
CCM2LQ9NUG4 RNA5SP148-201ENST00000516527 94 ntBASIC2.4□□□□□ -2.03
CCM2LQ9NUG4 SNORA31.11-201ENST00000516528 139 ntBASIC2.4□□□□□ -2.03
CCM2LQ9NUG4 Z83818.1-201ENST00000603584 150 ntBASIC2.4□□□□□ -2.03
CCM2LQ9NUG4 U1.36-201ENST00000620684 176 ntBASIC2.4□□□□□ -2.03
CCM2LQ9NUG4 MIR6079-201ENST00000635807 62 ntBASIC2.4□□□□□ -2.03
CCM2LQ9NUG4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
CCM2LQ9NUG4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCM2LQ9NUG4 Y_RNA.274-201ENST00000364714 101 ntBASIC2.39□□□□□ -2.03
CCM2LQ9NUG4 Y_RNA.297-201ENST00000364950 91 ntBASIC2.39□□□□□ -2.03
CCM2LQ9NUG4 MIR9-1-201ENST00000385198 89 ntBASIC2.39□□□□□ -2.03
CCM2LQ9NUG4 SNORA36B-201ENST00000410438 131 ntBASIC2.39□□□□□ -2.03
CCM2LQ9NUG4 RNA5SP450-201ENST00000411206 102 ntBASIC2.39□□□□□ -2.03
CCM2LQ9NUG4 AL163195.1-201ENST00000496941 348 ntBASIC2.39□□□□□ -2.03
CCM2LQ9NUG4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.39□□□□□ -2.03
CCM2LQ9NUG4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.39□□□□□ -2.03
CCM2LQ9NUG4 AC100767.1-201ENST00000528178 123 ntBASIC2.39□□□□□ -2.03
CCM2LQ9NUG4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.39□□□□□ -2.03
CCM2LQ9NUG4 AL365265.1-201ENST00000621045 234 ntBASIC2.39□□□□□ -2.03
CCM2LQ9NUG4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
CCM2LQ9NUG4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCM2LQ9NUG4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCM2LQ9NUG4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CCM2LQ9NUG4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCM2LQ9NUG4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCM2LQ9NUG4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCM2LQ9NUG4 MIR367-201ENST00000362299 68 ntBASIC2.38□□□□□ -2.03
CCM2LQ9NUG4 RNU4-17P-201ENST00000365598 141 ntBASIC2.38□□□□□ -2.03
CCM2LQ9NUG4 SNORA8.3-201ENST00000384679 139 ntBASIC2.38□□□□□ -2.03
CCM2LQ9NUG4 AL138752.1-201ENST00000452964 351 ntBASIC2.38□□□□□ -2.03
CCM2LQ9NUG4 snoU13.15-201ENST00000459407 104 ntBASIC2.38□□□□□ -2.03
CCM2LQ9NUG4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.38□□□□□ -2.03
CCM2LQ9NUG4 HMGB3P3-201ENST00000510526 400 ntBASIC2.38□□□□□ -2.03
CCM2LQ9NUG4 RNU6-341P-201ENST00000516973 96 ntBASIC2.38□□□□□ -2.03
CCM2LQ9NUG4 RNU2-19P-201ENST00000517288 84 ntBASIC2.38□□□□□ -2.03
CCM2LQ9NUG4 AC100821.1-201ENST00000523153 2479 ntBASIC2.38□□□□□ -2.03
CCM2LQ9NUG4 AC091178.2-201ENST00000584401 117 ntBASIC2.38□□□□□ -2.03
CCM2LQ9NUG4 Y_RNA.802-201ENST00000614892 130 ntBASIC2.38□□□□□ -2.03
CCM2LQ9NUG4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCM2LQ9NUG4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CCM2LQ9NUG4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCM2LQ9NUG4 MIR526A2-201ENST00000390198 65 ntBASIC2.37□□□□□ -2.03
CCM2LQ9NUG4 SNORD23.1-201ENST00000408212 104 ntBASIC2.37□□□□□ -2.03
CCM2LQ9NUG4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.37□□□□□ -2.03
CCM2LQ9NUG4 RNA5SP501-201ENST00000410990 112 ntBASIC2.37□□□□□ -2.03
CCM2LQ9NUG4 RNU6-437P-201ENST00000459408 95 ntBASIC2.37□□□□□ -2.03
CCM2LQ9NUG4 RNA5SP82-201ENST00000516707 92 ntBASIC2.37□□□□□ -2.03
CCM2LQ9NUG4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.37□□□□□ -2.03
CCM2LQ9NUG4 AC011604.1-201ENST00000545978 196 ntBASIC2.37□□□□□ -2.03
CCM2LQ9NUG4 MIR5688-201ENST00000580619 83 ntBASIC2.37□□□□□ -2.03
CCM2LQ9NUG4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.37□□□□□ -2.03
CCM2LQ9NUG4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.37□□□□□ -2.03
CCM2LQ9NUG4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.37□□□□□ -2.03
CCM2LQ9NUG4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.37□□□□□ -2.03
CCM2LQ9NUG4 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.37□□□□□ -2.03
CCM2LQ9NUG4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.37□□□□□ -2.03
CCM2LQ9NUG4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCM2LQ9NUG4 RNU6-653P-201ENST00000363074 106 ntBASIC2.36□□□□□ -2.03
CCM2LQ9NUG4 RNA5SP456-201ENST00000364002 114 ntBASIC2.36□□□□□ -2.03
CCM2LQ9NUG4 Y_RNA.785-201ENST00000384290 109 ntBASIC2.36□□□□□ -2.03
CCM2LQ9NUG4 SNORA80E-201ENST00000384744 137 ntBASIC2.36□□□□□ -2.03
CCM2LQ9NUG4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CCM2LQ9NUG4 SNORA3.2-201ENST00000408221 125 ntBASIC2.36□□□□□ -2.03
CCM2LQ9NUG4 AC011753.1-201ENST00000451001 220 ntBASIC2.36□□□□□ -2.03
CCM2LQ9NUG4 AC096725.1-201ENST00000514266 313 ntBASIC2.36□□□□□ -2.03
CCM2LQ9NUG4 RNVU1-2-201ENST00000516326 135 ntBASIC2.36□□□□□ -2.03
CCM2LQ9NUG4 AL358944.1-201ENST00000528537 144 ntBASIC2.36□□□□□ -2.03
CCM2LQ9NUG4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.36□□□□□ -2.03
CCM2LQ9NUG4 AC084364.2-201ENST00000546924 395 ntBASIC2.36□□□□□ -2.03
CCM2LQ9NUG4 MIR4724-201ENST00000579485 89 ntBASIC2.36□□□□□ -2.03
CCM2LQ9NUG4 ZNF658B-202ENST00000615961 3375 ntBASIC2.36□□□□□ -2.03
CCM2LQ9NUG4 Y_RNA.29-201ENST00000362570 113 ntBASIC2.35□□□□□ -2.03
CCM2LQ9NUG4 RNU6-1020P-201ENST00000363684 107 ntBASIC2.35□□□□□ -2.03
CCM2LQ9NUG4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 198.6 ms