Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 MIR410-201ENST00000362222 80 ntBASIC0.33□□□□□ -2.36
SDHAF3Q9NRP4 Y_RNA.38-201ENST00000362617 102 ntBASIC0.33□□□□□ -2.36
SDHAF3Q9NRP4 RNY1-201ENST00000364228 113 ntBASIC0.33□□□□□ -2.36
SDHAF3Q9NRP4 U8.5-201ENST00000364528 136 ntBASIC0.33□□□□□ -2.36
SDHAF3Q9NRP4 AL354751.2-201ENST00000415471 210 ntBASIC0.33□□□□□ -2.36
SDHAF3Q9NRP4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.33□□□□□ -2.36
SDHAF3Q9NRP4 MRPS18CP6-201ENST00000423587 223 ntBASIC0.33□□□□□ -2.36
SDHAF3Q9NRP4 MTND1P26-201ENST00000440488 538 ntBASIC0.33□□□□□ -2.36
SDHAF3Q9NRP4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.33□□□□□ -2.36
SDHAF3Q9NRP4 RNU4-57P-201ENST00000515980 135 ntBASIC0.33□□□□□ -2.36
SDHAF3Q9NRP4 AF235103.2-201ENST00000525753 346 ntBASIC0.33□□□□□ -2.36
SDHAF3Q9NRP4 AC018448.1-201ENST00000552843 316 ntBASIC0.33□□□□□ -2.36
SDHAF3Q9NRP4 MIR4764-201ENST00000580680 88 ntBASIC0.33□□□□□ -2.36
SDHAF3Q9NRP4 AC063944.3-201ENST00000609969 533 ntBASIC0.33□□□□□ -2.36
SDHAF3Q9NRP4 Z99129.1-201ENST00000612510 255 ntBASIC0.33□□□□□ -2.36
SDHAF3Q9NRP4 AC100810.6-201ENST00000638068 285 ntBASIC0.33□□□□□ -2.36
SDHAF3Q9NRP4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
SDHAF3Q9NRP4 RNU6-654P-201ENST00000364373 107 ntBASIC0.32□□□□□ -2.36
SDHAF3Q9NRP4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.32□□□□□ -2.36
SDHAF3Q9NRP4 RNU6-842P-201ENST00000384269 107 ntBASIC0.32□□□□□ -2.36
SDHAF3Q9NRP4 Y_RNA.490-201ENST00000384413 102 ntBASIC0.32□□□□□ -2.36
SDHAF3Q9NRP4 RNU6-1067P-201ENST00000384752 107 ntBASIC0.32□□□□□ -2.36
SDHAF3Q9NRP4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
SDHAF3Q9NRP4 MIR1302-7-201ENST00000408841 72 ntBASIC0.32□□□□□ -2.36
SDHAF3Q9NRP4 RNA5SP511-201ENST00000410487 115 ntBASIC0.32□□□□□ -2.36
SDHAF3Q9NRP4 RNA5SP222-201ENST00000411039 105 ntBASIC0.32□□□□□ -2.36
SDHAF3Q9NRP4 DLGAP5P1-201ENST00000430307 464 ntBASIC0.32□□□□□ -2.36
SDHAF3Q9NRP4 USP9YP30-201ENST00000430729 455 ntBASIC0.32□□□□□ -2.36
SDHAF3Q9NRP4 ELOCP24-201ENST00000456370 334 ntBASIC0.32□□□□□ -2.36
SDHAF3Q9NRP4 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
SDHAF3Q9NRP4 MIR4762-201ENST00000585261 75 ntBASIC0.32□□□□□ -2.36
SDHAF3Q9NRP4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.32□□□□□ -2.36
SDHAF3Q9NRP4 RNY3P3-201ENST00000363816 102 ntBASIC0.31□□□□□ -2.36
SDHAF3Q9NRP4 SNORD14.1-201ENST00000365609 90 ntBASIC0.31□□□□□ -2.36
SDHAF3Q9NRP4 SNORA36.2-201ENST00000384004 127 ntBASIC0.31□□□□□ -2.36
SDHAF3Q9NRP4 RNU6-1042P-201ENST00000384204 107 ntBASIC0.31□□□□□ -2.36
SDHAF3Q9NRP4 SNORD111-201ENST00000408139 94 ntBASIC0.31□□□□□ -2.36
SDHAF3Q9NRP4 MIR1827-201ENST00000408549 66 ntBASIC0.31□□□□□ -2.36
SDHAF3Q9NRP4 RNU6-1304P-201ENST00000411374 106 ntBASIC0.31□□□□□ -2.36
SDHAF3Q9NRP4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.31□□□□□ -2.36
SDHAF3Q9NRP4 MTCO2P12-201ENST00000427426 682 ntBASIC0.31□□□□□ -2.36
SDHAF3Q9NRP4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.31□□□□□ -2.36
SDHAF3Q9NRP4 AL392103.1-201ENST00000447000 198 ntBASIC0.31□□□□□ -2.36
SDHAF3Q9NRP4 SNORA68.3-201ENST00000515906 83 ntBASIC0.31□□□□□ -2.36
SDHAF3Q9NRP4 SNORA18.7-201ENST00000516910 131 ntBASIC0.31□□□□□ -2.36
SDHAF3Q9NRP4 AC104260.1-201ENST00000616660 539 ntBASIC0.31□□□□□ -2.36
SDHAF3Q9NRP4 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.31□□□□□ -2.36
SDHAF3Q9NRP4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 RNU6-874P-201ENST00000362390 105 ntBASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 RNA5SP48-201ENST00000363969 126 ntBASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 AC117470.1-201ENST00000381974 330 ntBASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 Y_RNA.498-201ENST00000384460 102 ntBASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 MIR136-201ENST00000385207 82 ntBASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 RNA5SP193-201ENST00000410353 107 ntBASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 RNU6-994P-201ENST00000410507 111 ntBASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 AL390729.2-201ENST00000416137 156 ntBASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 AC067940.1-201ENST00000458411 300 ntBASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 U8.22-201ENST00000459141 133 ntBASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 AC074133.1-201ENST00000515696 183 ntBASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 RNA5SP436-201ENST00000516020 115 ntBASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 RN7SKP12-201ENST00000516275 143 ntBASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 Y_RNA.673-201ENST00000516306 88 ntBASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 RNU6-273P-201ENST00000516937 96 ntBASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 MIR5701-3-201ENST00000578890 82 ntBASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 MIR5701-1-201ENST00000585138 82 ntBASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 NBR2-204ENST00000587322 63 ntBASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 MIR5701-2-201ENST00000615634 82 ntBASIC0.3□□□□□ -2.36
SDHAF3Q9NRP4 Y_RNA.243-201ENST00000364481 109 ntBASIC0.29□□□□□ -2.36
SDHAF3Q9NRP4 SNORD105-201ENST00000386910 85 ntBASIC0.29□□□□□ -2.36
SDHAF3Q9NRP4 RNA5SP95-201ENST00000410319 137 ntBASIC0.29□□□□□ -2.36
SDHAF3Q9NRP4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.29□□□□□ -2.36
SDHAF3Q9NRP4 RNU6-625P-201ENST00000459412 107 ntBASIC0.29□□□□□ -2.36
SDHAF3Q9NRP4 AC010486.3-201ENST00000511602 785 ntBASIC0.29□□□□□ -2.36
SDHAF3Q9NRP4 RNU6-1088P-201ENST00000516850 104 ntBASIC0.29□□□□□ -2.36
SDHAF3Q9NRP4 MTND3P12-201ENST00000559068 328 ntBASIC0.29□□□□□ -2.36
SDHAF3Q9NRP4 AF250324.2-201ENST00000608299 610 ntBASIC0.29□□□□□ -2.36
SDHAF3Q9NRP4 AL136317.1-201ENST00000612653 226 ntBASIC0.29□□□□□ -2.36
SDHAF3Q9NRP4 MIR3674-201ENST00000636576 68 ntBASIC0.29□□□□□ -2.36
SDHAF3Q9NRP4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
SDHAF3Q9NRP4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
SDHAF3Q9NRP4 RNY1P16-201ENST00000363063 111 ntBASIC0.28□□□□□ -2.36
SDHAF3Q9NRP4 SNORD114-23-201ENST00000363536 72 ntBASIC0.28□□□□□ -2.36
SDHAF3Q9NRP4 SNORD113.3-201ENST00000364630 78 ntBASIC0.28□□□□□ -2.36
SDHAF3Q9NRP4 Y_RNA.361-201ENST00000365515 120 ntBASIC0.28□□□□□ -2.36
SDHAF3Q9NRP4 Y_RNA.557-201ENST00000384680 107 ntBASIC0.28□□□□□ -2.36
SDHAF3Q9NRP4 RNU6-1105P-201ENST00000384774 107 ntBASIC0.28□□□□□ -2.36
SDHAF3Q9NRP4 MIR190B-201ENST00000401119 79 ntBASIC0.28□□□□□ -2.36
SDHAF3Q9NRP4 Y_RNA.621-201ENST00000411065 96 ntBASIC0.28□□□□□ -2.36
SDHAF3Q9NRP4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.28□□□□□ -2.36
SDHAF3Q9NRP4 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
SDHAF3Q9NRP4 RNU7-43P-201ENST00000516554 64 ntBASIC0.28□□□□□ -2.36
SDHAF3Q9NRP4 AC090617.10-201ENST00000624308 134 ntBASIC0.28□□□□□ -2.36
SDHAF3Q9NRP4 AC134026.1-201ENST00000623249 2239 ntBASIC0.28□□□□□ -2.37
SDHAF3Q9NRP4 AC090625.1-201ENST00000357130 210 ntBASIC0.27□□□□□ -2.37
SDHAF3Q9NRP4 SNORD114-7-201ENST00000362520 77 ntBASIC0.27□□□□□ -2.37
SDHAF3Q9NRP4 RNU6-879P-201ENST00000364328 108 ntBASIC0.27□□□□□ -2.37
SDHAF3Q9NRP4 Y_RNA.364-201ENST00000365532 101 ntBASIC0.27□□□□□ -2.37
SDHAF3Q9NRP4 RNU6-318P-201ENST00000384283 103 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 250.4 ms