Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 AL157834.3-201ENST00000615543 103 ntBASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 AC011476.5-201ENST00000615594 130 ntBASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 AC027335.2-201ENST00000624030 375 ntBASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.86□□□□□ -2.27
CCL28Q9NRJ3 Y_RNA.70-201ENST00000362886 110 ntBASIC0.86□□□□□ -2.27
CCL28Q9NRJ3 RNU6-626P-201ENST00000363354 107 ntBASIC0.86□□□□□ -2.27
CCL28Q9NRJ3 Y_RNA.230-201ENST00000364348 109 ntBASIC0.86□□□□□ -2.27
CCL28Q9NRJ3 RNU6-20P-201ENST00000384106 107 ntBASIC0.86□□□□□ -2.27
CCL28Q9NRJ3 MIR764-201ENST00000390811 85 ntBASIC0.86□□□□□ -2.27
CCL28Q9NRJ3 MIR891A-201ENST00000401237 79 ntBASIC0.86□□□□□ -2.27
CCL28Q9NRJ3 SNORA11.2-201ENST00000408318 127 ntBASIC0.86□□□□□ -2.27
CCL28Q9NRJ3 RNU2-61P-201ENST00000411069 191 ntBASIC0.86□□□□□ -2.27
CCL28Q9NRJ3 RNU6-1199P-201ENST00000411249 104 ntBASIC0.86□□□□□ -2.27
CCL28Q9NRJ3 RNU6-1054P-201ENST00000411293 104 ntBASIC0.86□□□□□ -2.27
CCL28Q9NRJ3 CYCTP-201ENST00000504253 315 ntBASIC0.86□□□□□ -2.27
CCL28Q9NRJ3 SNORA31.4-201ENST00000516049 129 ntBASIC0.86□□□□□ -2.27
CCL28Q9NRJ3 SNORD116-28-201ENST00000516123 91 ntBASIC0.86□□□□□ -2.27
CCL28Q9NRJ3 RNU6-155P-201ENST00000516347 100 ntBASIC0.86□□□□□ -2.27
CCL28Q9NRJ3 RNA5SP404-201ENST00000517118 132 ntBASIC0.86□□□□□ -2.27
CCL28Q9NRJ3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.86□□□□□ -2.27
CCL28Q9NRJ3 U6.92-201ENST00000636464 89 ntBASIC0.86□□□□□ -2.27
CCL28Q9NRJ3 RNU6-833P-201ENST00000363486 107 ntBASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 SNORA70.7-201ENST00000384159 133 ntBASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 Y_RNA.446-201ENST00000384178 104 ntBASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 SNORD116-13-201ENST00000384408 92 ntBASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 MIR222-201ENST00000384992 110 ntBASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 MTCO2P27-201ENST00000420740 428 ntBASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 AC096644.2-201ENST00000429278 159 ntBASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 AC104332.1-201ENST00000440471 797 ntBASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 CHEK2P4-201ENST00000450340 246 ntBASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 RNU7-152P-201ENST00000458982 64 ntBASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 SNORA70.22-201ENST00000517160 124 ntBASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 AC006600.1-201ENST00000572529 153 ntBASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 AL355375.2-201ENST00000574825 175 ntBASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 VN1R91P-201ENST00000594377 169 ntBASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 AC120024.3-201ENST00000603167 156 ntBASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 AC027279.3-201ENST00000625055 122 ntBASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.85□□□□□ -2.27
CCL28Q9NRJ3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 RNU4-79P-201ENST00000362764 141 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 RNU6-324P-201ENST00000363957 106 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 U8.5-201ENST00000364528 136 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 RNU6-1080P-201ENST00000383982 107 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 Y_RNA.428-201ENST00000384078 102 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 RNU6-708P-201ENST00000384217 107 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 Y_RNA.463-201ENST00000384271 102 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 RNU6-1105P-201ENST00000384774 107 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 Y_RNA.621-201ENST00000411065 96 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 AC245047.7-201ENST00000440265 293 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 RPEP5-201ENST00000441137 268 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 RPL39P39-201ENST00000455840 151 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 AC048334.1-201ENST00000477975 159 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 RPS23P4-201ENST00000487908 423 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 AC091951.2-201ENST00000500762 203 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 FGF7P4-201ENST00000509595 295 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 RNU6-1116P-201ENST00000517269 99 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 AC022616.4-201ENST00000522985 181 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 AC103810.9-201ENST00000606688 112 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 AC084781.2-201ENST00000615568 161 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 MIR4272-201ENST00000635924 64 ntBASIC0.84□□□□□ -2.27
CCL28Q9NRJ3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.84□□□□□ -2.28
CCL28Q9NRJ3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.84□□□□□ -2.28
CCL28Q9NRJ3 RNU6-1115P-201ENST00000362490 106 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 SNORD68-201ENST00000363214 84 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 Y_RNA.146-201ENST00000363549 102 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 RNU1-124P-201ENST00000363861 145 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 Y_RNA.303-201ENST00000364998 94 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 SNORA22-201ENST00000383907 134 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 RNU6-163P-201ENST00000384396 106 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 SNORA22C-201ENST00000384614 134 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 MIR526A1-201ENST00000384897 85 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 RNU6-910P-201ENST00000390844 107 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 Y_RNA.632-201ENST00000459189 102 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 SNORD19B-201ENST00000459623 84 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 RNU6-436P-201ENST00000516171 114 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 RNU6-966P-201ENST00000516479 104 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 SNORD116.3-201ENST00000517176 78 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 RN7SKP295-201ENST00000517264 153 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 AC011604.1-201ENST00000545978 196 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 MIR4762-201ENST00000585261 75 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 MIR4295-201ENST00000585286 85 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 AC022441.3-201ENST00000605737 136 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 AC004832.4-201ENST00000608952 331 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 AL591926.4-201ENST00000616895 298 ntBASIC0.83□□□□□ -2.28
CCL28Q9NRJ3 Y_RNA.172-201ENST00000363765 102 ntBASIC0.82□□□□□ -2.28
CCL28Q9NRJ3 Y_RNA.187-201ENST00000363918 113 ntBASIC0.82□□□□□ -2.28
CCL28Q9NRJ3 Y_RNA.570-201ENST00000384750 101 ntBASIC0.82□□□□□ -2.28
CCL28Q9NRJ3 SNORD12-201ENST00000391002 90 ntBASIC0.82□□□□□ -2.28
CCL28Q9NRJ3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.82□□□□□ -2.28
CCL28Q9NRJ3 PIGPP3-201ENST00000425307 415 ntBASIC0.82□□□□□ -2.28
CCL28Q9NRJ3 AC108667.1-201ENST00000428618 249 ntBASIC0.82□□□□□ -2.28
CCL28Q9NRJ3 AC093019.1-201ENST00000443135 252 ntBASIC0.82□□□□□ -2.28
CCL28Q9NRJ3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms