Protein–RNA interactions for Protein: Q9NP99

TREM1, Triggering receptor expressed on myeloid cells 1, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1Q9NP99 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 RNU4-20P-201ENST00000365601 151 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 ELOCP21-201ENST00000412558 336 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 AL390729.2-201ENST00000416137 156 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 AL353193.1-201ENST00000421444 268 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 MTND2P39-201ENST00000457230 764 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 AC116353.2-201ENST00000505332 712 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 RNA5SP94-201ENST00000516917 108 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 RPL23AP91-201ENST00000569211 455 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 MIR5696-201ENST00000578474 85 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 MIR4804-201ENST00000581683 73 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 AC011712.1-201ENST00000588959 234 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 AC040904.1-201ENST00000590850 223 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 Z94722.1-201ENST00000604328 474 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 AC104408.1-201ENST00000605241 170 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 AC005014.3-201ENST00000605985 190 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 MIR330-201ENST00000362196 94 ntBASIC-0.19□□□□□ -2.44
TREM1Q9NP99 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.19□□□□□ -2.44
TREM1Q9NP99 MIR522-201ENST00000385071 87 ntBASIC-0.19□□□□□ -2.44
TREM1Q9NP99 USMG5P1-201ENST00000425964 177 ntBASIC-0.19□□□□□ -2.44
TREM1Q9NP99 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.19□□□□□ -2.44
TREM1Q9NP99 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.19□□□□□ -2.44
TREM1Q9NP99 RNU6-261P-201ENST00000459506 102 ntBASIC-0.19□□□□□ -2.44
TREM1Q9NP99 AC093023.1-201ENST00000547375 507 ntBASIC-0.19□□□□□ -2.44
TREM1Q9NP99 MIR5190-201ENST00000581537 80 ntBASIC-0.19□□□□□ -2.44
TREM1Q9NP99 SNORA25.18-201ENST00000607153 114 ntBASIC-0.19□□□□□ -2.44
TREM1Q9NP99 AC099654.12-201ENST00000639868 649 ntBASIC-0.19□□□□□ -2.44
TREM1Q9NP99 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.2□□□□□ -2.44
TREM1Q9NP99 RN7SKP287-201ENST00000516546 266 ntBASIC-0.2□□□□□ -2.44
TREM1Q9NP99 RNU6-63P-201ENST00000516690 95 ntBASIC-0.2□□□□□ -2.44
TREM1Q9NP99 MIR1273G-201ENST00000577677 100 ntBASIC-0.2□□□□□ -2.44
TREM1Q9NP99 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.2□□□□□ -2.44
TREM1Q9NP99 MIR3678-201ENST00000578455 94 ntBASIC-0.2□□□□□ -2.44
TREM1Q9NP99 AC090517.2-201ENST00000614966 680 ntBASIC-0.2□□□□□ -2.44
TREM1Q9NP99 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.2□□□□□ -2.44
TREM1Q9NP99 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.21□□□□□ -2.44
TREM1Q9NP99 SNORD100-201ENST00000408573 76 ntBASIC-0.21□□□□□ -2.44
TREM1Q9NP99 USP9YP16-201ENST00000430287 407 ntBASIC-0.21□□□□□ -2.44
TREM1Q9NP99 MTND4LP16-201ENST00000440828 295 ntBASIC-0.21□□□□□ -2.44
TREM1Q9NP99 USP9YP23-201ENST00000455085 407 ntBASIC-0.21□□□□□ -2.44
TREM1Q9NP99 AC092989.1-201ENST00000481235 277 ntBASIC-0.21□□□□□ -2.44
TREM1Q9NP99 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.21□□□□□ -2.44
TREM1Q9NP99 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.21□□□□□ -2.44
TREM1Q9NP99 AC090617.3-201ENST00000573670 475 ntBASIC-0.21□□□□□ -2.44
TREM1Q9NP99 AP000753.3-201ENST00000604083 169 ntBASIC-0.21□□□□□ -2.44
TREM1Q9NP99 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.21□□□□□ -2.44
TREM1Q9NP99 RNU6-302P-201ENST00000365249 107 ntBASIC-0.22□□□□□ -2.44
TREM1Q9NP99 SNORA8.2-201ENST00000384372 139 ntBASIC-0.22□□□□□ -2.44
TREM1Q9NP99 MIR514A2-201ENST00000385131 88 ntBASIC-0.22□□□□□ -2.44
TREM1Q9NP99 MIR514A3-201ENST00000385132 88 ntBASIC-0.22□□□□□ -2.44
TREM1Q9NP99 MTND3P23-201ENST00000431980 347 ntBASIC-0.22□□□□□ -2.44
TREM1Q9NP99 SEPT7P4-201ENST00000437076 306 ntBASIC-0.22□□□□□ -2.44
TREM1Q9NP99 MTND3P16-201ENST00000452205 344 ntBASIC-0.22□□□□□ -2.44
TREM1Q9NP99 RNU7-56P-201ENST00000458744 62 ntBASIC-0.22□□□□□ -2.44
TREM1Q9NP99 U8.19-201ENST00000459095 133 ntBASIC-0.22□□□□□ -2.44
TREM1Q9NP99 U8.22-201ENST00000459141 133 ntBASIC-0.22□□□□□ -2.44
TREM1Q9NP99 AC022616.4-201ENST00000522985 181 ntBASIC-0.22□□□□□ -2.44
TREM1Q9NP99 MIR4771-2-201ENST00000577758 74 ntBASIC-0.22□□□□□ -2.44
TREM1Q9NP99 MIR548AR-201ENST00000582191 57 ntBASIC-0.22□□□□□ -2.44
TREM1Q9NP99 MIR4771-1-201ENST00000582617 74 ntBASIC-0.22□□□□□ -2.44
TREM1Q9NP99 AC092954.2-201ENST00000609103 430 ntBASIC-0.22□□□□□ -2.44
TREM1Q9NP99 MIR8087-201ENST00000612745 78 ntBASIC-0.22□□□□□ -2.44
TREM1Q9NP99 AC022960.3-201ENST00000619794 441 ntBASIC-0.22□□□□□ -2.44
TREM1Q9NP99 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.23□□□□□ -2.45
TREM1Q9NP99 RNU6-254P-201ENST00000363377 107 ntBASIC-0.23□□□□□ -2.45
TREM1Q9NP99 MIR517A-201ENST00000385001 87 ntBASIC-0.23□□□□□ -2.45
TREM1Q9NP99 RNU6-700P-201ENST00000391043 107 ntBASIC-0.23□□□□□ -2.45
TREM1Q9NP99 RNA5SP496-201ENST00000391240 109 ntBASIC-0.23□□□□□ -2.45
TREM1Q9NP99 RNU2-54P-201ENST00000410299 190 ntBASIC-0.23□□□□□ -2.45
TREM1Q9NP99 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.23□□□□□ -2.45
TREM1Q9NP99 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.23□□□□□ -2.45
TREM1Q9NP99 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.23□□□□□ -2.45
TREM1Q9NP99 AC083798.1-201ENST00000472671 131 ntBASIC-0.23□□□□□ -2.45
TREM1Q9NP99 AC010486.3-201ENST00000511602 785 ntBASIC-0.23□□□□□ -2.45
TREM1Q9NP99 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.23□□□□□ -2.45
TREM1Q9NP99 AC141557.1-201ENST00000540982 400 ntBASIC-0.23□□□□□ -2.45
TREM1Q9NP99 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.23□□□□□ -2.45
TREM1Q9NP99 MIR4676-201ENST00000583078 72 ntBASIC-0.23□□□□□ -2.45
TREM1Q9NP99 SNORD114-26-201ENST00000363543 72 ntBASIC-0.24□□□□□ -2.45
TREM1Q9NP99 Y_RNA.796-201ENST00000364268 102 ntBASIC-0.24□□□□□ -2.45
TREM1Q9NP99 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.24□□□□□ -2.45
TREM1Q9NP99 Y_RNA.799-201ENST00000364992 102 ntBASIC-0.24□□□□□ -2.45
TREM1Q9NP99 SNORA72.3-201ENST00000365074 132 ntBASIC-0.24□□□□□ -2.45
TREM1Q9NP99 RNU6V-201ENST00000384105 107 ntBASIC-0.24□□□□□ -2.45
TREM1Q9NP99 RNU6-514P-201ENST00000384208 107 ntBASIC-0.24□□□□□ -2.45
TREM1Q9NP99 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.24□□□□□ -2.45
TREM1Q9NP99 RNU6-95P-201ENST00000384697 107 ntBASIC-0.24□□□□□ -2.45
TREM1Q9NP99 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.24□□□□□ -2.45
TREM1Q9NP99 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.24□□□□□ -2.45
TREM1Q9NP99 AC092447.3-201ENST00000426027 686 ntBASIC-0.24□□□□□ -2.45
TREM1Q9NP99 MTND1P11-201ENST00000456661 876 ntBASIC-0.24□□□□□ -2.45
TREM1Q9NP99 snoU13.21-201ENST00000459368 105 ntBASIC-0.24□□□□□ -2.45
TREM1Q9NP99 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.24□□□□□ -2.45
TREM1Q9NP99 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.24□□□□□ -2.45
TREM1Q9NP99 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.24□□□□□ -2.45
TREM1Q9NP99 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.24□□□□□ -2.45
TREM1Q9NP99 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.24□□□□□ -2.45
TREM1Q9NP99 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms