Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC022447.4-201ENST00000504053 364 ntBASIC-0.59□□□□□ -2.5
CHD8Q9HCK8 AC005178.1-201ENST00000508392 440 ntBASIC-0.59□□□□□ -2.5
CHD8Q9HCK8 AC010486.3-201ENST00000511602 785 ntBASIC-0.59□□□□□ -2.5
CHD8Q9HCK8 AP002782.1-201ENST00000623107 614 ntBASIC-0.59□□□□□ -2.5
CHD8Q9HCK8 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.59□□□□□ -2.5
CHD8Q9HCK8 SNORD115-48-201ENST00000364764 76 ntBASIC-0.59□□□□□ -2.5
CHD8Q9HCK8 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.59□□□□□ -2.5
CHD8Q9HCK8 AC069271.1-201ENST00000445577 156 ntBASIC-0.59□□□□□ -2.5
CHD8Q9HCK8 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.59□□□□□ -2.5
CHD8Q9HCK8 AC087894.1-201ENST00000538359 518 ntBASIC-0.59□□□□□ -2.5
CHD8Q9HCK8 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.59□□□□□ -2.5
CHD8Q9HCK8 MIR4639-201ENST00000584938 69 ntBASIC-0.59□□□□□ -2.5
CHD8Q9HCK8 AC073539.2-201ENST00000597113 165 ntBASIC-0.59□□□□□ -2.5
CHD8Q9HCK8 AC108747.1-201ENST00000609508 535 ntBASIC-0.59□□□□□ -2.5
CHD8Q9HCK8 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.59□□□□□ -2.5
CHD8Q9HCK8 AC244669.1-204ENST00000621564 178 ntBASIC-0.59□□□□□ -2.5
CHD8Q9HCK8 AP002371.2-201ENST00000624450 503 ntBASIC-0.59□□□□□ -2.5
CHD8Q9HCK8 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 MIR19A-201ENST00000384878 82 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 MIR570-201ENST00000384917 97 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 MIR487A-201ENST00000385009 80 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 AL590623.1-201ENST00000427864 105 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 HSPE1P23-201ENST00000509838 286 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 RNU6-135P-201ENST00000516769 101 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 ADI1P3-201ENST00000549509 470 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 AC012414.2-201ENST00000559474 187 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 VN1R87P-201ENST00000596706 487 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 AL353803.5-201ENST00000599815 141 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 AP001033.2-201ENST00000609701 1003 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 RNU6-934P-201ENST00000365154 107 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 RNA5SP117-201ENST00000365294 118 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 SNORA2.2-201ENST00000365473 135 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 RNU2-54P-201ENST00000410299 190 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 TIMM9P2-201ENST00000419324 266 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 AL365184.2-201ENST00000431139 435 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 AC084368.1-201ENST00000620935 65 ntBASIC-0.6□□□□□ -2.51
CHD8Q9HCK8 RNU6-511P-201ENST00000363496 107 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 MIR517B-201ENST00000385102 67 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 AL117339.3-201ENST00000418733 162 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 AC078809.1-201ENST00000427601 140 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 MIR5708-201ENST00000579723 85 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 MIR4520-1-201ENST00000582609 70 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 FRG1KP-201ENST00000623592 341 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 AC027279.3-201ENST00000625055 122 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 RNY1P11-201ENST00000363759 113 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 MIR208B-201ENST00000401172 77 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 RNU2-39P-201ENST00000410604 198 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 AC016632.1-201ENST00000503994 196 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 AC097462.1-201ENST00000514125 324 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 SNORD92-201ENST00000585078 85 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 AC099785.1-201ENST00000605697 437 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 AC027449.1-201ENST00000608890 407 ntBASIC-0.61□□□□□ -2.51
CHD8Q9HCK8 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 MIR802-201ENST00000390235 94 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 MTND1P32-201ENST00000433043 938 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 AC079395.1-201ENST00000510981 262 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 RNU6-583P-201ENST00000516012 92 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 RNU7-43P-201ENST00000516554 64 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 AL355375.2-201ENST00000574825 175 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 MIR3179-1-201ENST00000578940 84 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 MIR3179-2-201ENST00000579107 84 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 MIR3179-3-201ENST00000579566 84 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 AC092574.1-201ENST00000609771 420 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 MIR3179-4-201ENST00000617599 84 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 AC139792.3-201ENST00000623525 224 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 RNU6-580P-201ENST00000365159 107 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 Y_RNA.397-201ENST00000383950 98 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 AC004223.4-201ENST00000612426 332 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 SCARNA4-201ENST00000629045 128 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 MTND4P9-201ENST00000507819 1346 ntBASIC-0.62□□□□□ -2.51
CHD8Q9HCK8 RNU6-1128P-201ENST00000362825 109 ntBASIC-0.63□□□□□ -2.51
CHD8Q9HCK8 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.63□□□□□ -2.51
CHD8Q9HCK8 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.63□□□□□ -2.51
CHD8Q9HCK8 SNORD64-201ENST00000386683 67 ntBASIC-0.63□□□□□ -2.51
CHD8Q9HCK8 SNAP23P1-201ENST00000433229 246 ntBASIC-0.63□□□□□ -2.51
CHD8Q9HCK8 RPL39P25-201ENST00000449384 154 ntBASIC-0.63□□□□□ -2.51
CHD8Q9HCK8 uc_338.4-201ENST00000616635 176 ntBASIC-0.63□□□□□ -2.51
CHD8Q9HCK8 AC134878.1-201ENST00000619901 243 ntBASIC-0.63□□□□□ -2.51
CHD8Q9HCK8 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.63□□□□□ -2.51
CHD8Q9HCK8 AL445523.1-201ENST00000451184 1362 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms