Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC022513.1-201ENST00000624512 117 ntBASIC2.21□□□□□ -2.06
USP29Q9HBJ7 MIR338-201ENST00000636369 67 ntBASIC2.21□□□□□ -2.06
USP29Q9HBJ7 AC068700.1-201ENST00000565862 3754 ntBASIC2.21□□□□□ -2.06
USP29Q9HBJ7 CENPCP1-201ENST00000533085 2578 ntBASIC2.21□□□□□ -2.06
USP29Q9HBJ7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.21□□□□□ -2.06
USP29Q9HBJ7 snoU2-30.2-201ENST00000362805 70 ntBASIC2.2□□□□□ -2.06
USP29Q9HBJ7 Y_RNA.292-201ENST00000364904 97 ntBASIC2.2□□□□□ -2.06
USP29Q9HBJ7 RNU6-407P-201ENST00000365280 104 ntBASIC2.2□□□□□ -2.06
USP29Q9HBJ7 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
USP29Q9HBJ7 RNU6-211P-201ENST00000384047 107 ntBASIC2.2□□□□□ -2.06
USP29Q9HBJ7 SNORD116-13-201ENST00000384408 92 ntBASIC2.2□□□□□ -2.06
USP29Q9HBJ7 Y_RNA.515-201ENST00000384535 112 ntBASIC2.2□□□□□ -2.06
USP29Q9HBJ7 MIR29C-201ENST00000385231 88 ntBASIC2.2□□□□□ -2.06
USP29Q9HBJ7 Y_RNA.590-201ENST00000410140 107 ntBASIC2.2□□□□□ -2.06
USP29Q9HBJ7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.2□□□□□ -2.06
USP29Q9HBJ7 AL591806.2-201ENST00000433122 173 ntBASIC2.2□□□□□ -2.06
USP29Q9HBJ7 RPS20P10-201ENST00000451209 253 ntBASIC2.2□□□□□ -2.06
USP29Q9HBJ7 U8.19-201ENST00000459095 133 ntBASIC2.2□□□□□ -2.06
USP29Q9HBJ7 RPL23AP42-201ENST00000471152 471 ntBASIC2.2□□□□□ -2.06
USP29Q9HBJ7 RNU6-1041P-201ENST00000516254 102 ntBASIC2.2□□□□□ -2.06
USP29Q9HBJ7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.2□□□□□ -2.06
USP29Q9HBJ7 MIR3668-201ENST00000582138 75 ntBASIC2.2□□□□□ -2.06
USP29Q9HBJ7 U6.73-201ENST00000619194 103 ntBASIC2.2□□□□□ -2.06
USP29Q9HBJ7 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.2□□□□□ -2.06
USP29Q9HBJ7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
USP29Q9HBJ7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
USP29Q9HBJ7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
USP29Q9HBJ7 RNU1-22P-201ENST00000363334 158 ntBASIC2.19□□□□□ -2.06
USP29Q9HBJ7 RNU6-1048P-201ENST00000364054 107 ntBASIC2.19□□□□□ -2.06
USP29Q9HBJ7 RNU1-96P-201ENST00000364163 162 ntBASIC2.19□□□□□ -2.06
USP29Q9HBJ7 SNORA72.4-201ENST00000384174 132 ntBASIC2.19□□□□□ -2.06
USP29Q9HBJ7 RNU4-52P-201ENST00000384209 138 ntBASIC2.19□□□□□ -2.06
USP29Q9HBJ7 RNU6-717P-201ENST00000459076 104 ntBASIC2.19□□□□□ -2.06
USP29Q9HBJ7 SNORA31.25-201ENST00000517242 134 ntBASIC2.19□□□□□ -2.06
USP29Q9HBJ7 RNU7-128P-201ENST00000517247 62 ntBASIC2.19□□□□□ -2.06
USP29Q9HBJ7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.19□□□□□ -2.06
USP29Q9HBJ7 AC015712.3-201ENST00000559380 164 ntBASIC2.19□□□□□ -2.06
USP29Q9HBJ7 AL031274.2-201ENST00000599419 203 ntBASIC2.19□□□□□ -2.06
USP29Q9HBJ7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
USP29Q9HBJ7 AL356292.1-201ENST00000283110 373 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
USP29Q9HBJ7 Y_RNA.274-201ENST00000364714 101 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 RNU6-200P-201ENST00000364743 107 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 RNA5SP138-201ENST00000365098 114 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 RNU6-417P-201ENST00000384712 107 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 HMGN2P39-201ENST00000398005 273 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 SNORD23.1-201ENST00000408212 104 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 BTF3P11-201ENST00000426582 477 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 ATP5J2P3-201ENST00000451550 258 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 COX6CP14-201ENST00000469580 174 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 RPS27P22-201ENST00000478056 241 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 RPL36AP21-201ENST00000490372 323 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.18□□□□□ -2.06
USP29Q9HBJ7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.18□□□□□ -2.06
USP29Q9HBJ7 AC097462.1-201ENST00000514125 324 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 RNU6-138P-201ENST00000515952 107 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 RNU6-63P-201ENST00000516690 95 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 RNU7-193P-201ENST00000516723 65 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.18□□□□□ -2.06
USP29Q9HBJ7 MIR4438-201ENST00000585271 93 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 AC078899.2-201ENST00000595282 212 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 AC004832.4-201ENST00000608952 331 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 AC073349.3-201ENST00000617616 186 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 U6.108-201ENST00000637764 58 ntBASIC2.18□□□□□ -2.06
USP29Q9HBJ7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
USP29Q9HBJ7 RNU1-58P-201ENST00000362413 163 ntBASIC2.17□□□□□ -2.06
USP29Q9HBJ7 SNORD115-3-201ENST00000363100 82 ntBASIC2.17□□□□□ -2.06
USP29Q9HBJ7 Y_RNA.200-201ENST00000364018 102 ntBASIC2.17□□□□□ -2.06
USP29Q9HBJ7 SNORA6-201ENST00000384033 151 ntBASIC2.17□□□□□ -2.06
USP29Q9HBJ7 MIR1253-201ENST00000408273 105 ntBASIC2.17□□□□□ -2.06
USP29Q9HBJ7 MIR1289-2-201ENST00000408360 111 ntBASIC2.17□□□□□ -2.06
USP29Q9HBJ7 MIR1283-2-201ENST00000408621 87 ntBASIC2.17□□□□□ -2.06
USP29Q9HBJ7 MIR1298-201ENST00000408783 112 ntBASIC2.17□□□□□ -2.06
USP29Q9HBJ7 SNORA11.4-201ENST00000408823 129 ntBASIC2.17□□□□□ -2.06
USP29Q9HBJ7 Y_RNA.626-201ENST00000411288 95 ntBASIC2.17□□□□□ -2.06
USP29Q9HBJ7 BX510359.4-201ENST00000423750 193 ntBASIC2.17□□□□□ -2.06
USP29Q9HBJ7 AC099677.2-201ENST00000436385 175 ntBASIC2.17□□□□□ -2.06
USP29Q9HBJ7 AC104332.1-201ENST00000440471 797 ntBASIC2.17□□□□□ -2.06
USP29Q9HBJ7 RNU6-1146P-201ENST00000516282 102 ntBASIC2.17□□□□□ -2.06
USP29Q9HBJ7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.17□□□□□ -2.06
USP29Q9HBJ7 AL137100.2-201ENST00000555786 315 ntBASIC2.17□□□□□ -2.06
USP29Q9HBJ7 AC134026.1-201ENST00000623249 2239 ntBASIC2.16□□□□□ -2.06
USP29Q9HBJ7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.16□□□□□ -2.06
USP29Q9HBJ7 SNORA33-201ENST00000363664 130 ntBASIC2.16□□□□□ -2.06
USP29Q9HBJ7 RNA5SP160-201ENST00000364866 120 ntBASIC2.16□□□□□ -2.06
USP29Q9HBJ7 RNA5SP467-201ENST00000391274 118 ntBASIC2.16□□□□□ -2.06
USP29Q9HBJ7 RNA5SP511-201ENST00000410487 115 ntBASIC2.16□□□□□ -2.06
USP29Q9HBJ7 EBAG9P1-201ENST00000418955 543 ntBASIC2.16□□□□□ -2.06
USP29Q9HBJ7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.16□□□□□ -2.06
USP29Q9HBJ7 RNU7-141P-201ENST00000459304 62 ntBASIC2.16□□□□□ -2.06
USP29Q9HBJ7 AC010409.1-201ENST00000487382 476 ntBASIC2.16□□□□□ -2.06
USP29Q9HBJ7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.16□□□□□ -2.06
USP29Q9HBJ7 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.16□□□□□ -2.06
USP29Q9HBJ7 Y_RNA.679-201ENST00000516416 91 ntBASIC2.16□□□□□ -2.06
USP29Q9HBJ7 AC015720.1-201ENST00000565251 277 ntBASIC2.16□□□□□ -2.06
USP29Q9HBJ7 MIR4529-201ENST00000578110 78 ntBASIC2.16□□□□□ -2.06
USP29Q9HBJ7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.16□□□□□ -2.06
USP29Q9HBJ7 AC013791.1-201ENST00000616619 62 ntBASIC2.16□□□□□ -2.06
USP29Q9HBJ7 AC012640.5-201ENST00000623897 319 ntBASIC2.16□□□□□ -2.06
USP29Q9HBJ7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 160.9 ms