Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 MIR4419B-201ENST00000577260 68 ntBASIC1.73□□□□□ -2.13
BRF2Q9HAW0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.73□□□□□ -2.13
BRF2Q9HAW0 AC095038.3-201ENST00000634439 195 ntBASIC1.73□□□□□ -2.13
BRF2Q9HAW0 RNU6-1123P-201ENST00000362347 106 ntBASIC1.72□□□□□ -2.13
BRF2Q9HAW0 Y_RNA.19-201ENST00000362462 99 ntBASIC1.72□□□□□ -2.13
BRF2Q9HAW0 RNU4-90P-201ENST00000362773 141 ntBASIC1.72□□□□□ -2.13
BRF2Q9HAW0 Y_RNA.326-201ENST00000365176 113 ntBASIC1.72□□□□□ -2.13
BRF2Q9HAW0 RNU6-117P-201ENST00000365415 107 ntBASIC1.72□□□□□ -2.13
BRF2Q9HAW0 STAG3L5P-204ENST00000443759 179 ntBASIC1.72□□□□□ -2.13
BRF2Q9HAW0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.72□□□□□ -2.13
BRF2Q9HAW0 CBX3P4-201ENST00000538909 354 ntBASIC1.72□□□□□ -2.13
BRF2Q9HAW0 AC024614.2-201ENST00000577584 372 ntBASIC1.72□□□□□ -2.13
BRF2Q9HAW0 MIR3618-201ENST00000580330 88 ntBASIC1.72□□□□□ -2.13
BRF2Q9HAW0 MIR3145-201ENST00000580727 82 ntBASIC1.72□□□□□ -2.13
BRF2Q9HAW0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.72□□□□□ -2.13
BRF2Q9HAW0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.71□□□□□ -2.13
BRF2Q9HAW0 ICE2P2-201ENST00000483823 2787 ntBASIC1.71□□□□□ -2.14
BRF2Q9HAW0 Y_RNA.286-201ENST00000364813 102 ntBASIC1.71□□□□□ -2.14
BRF2Q9HAW0 Y_RNA.341-201ENST00000365341 102 ntBASIC1.71□□□□□ -2.14
BRF2Q9HAW0 RNU6-338P-201ENST00000383888 105 ntBASIC1.71□□□□□ -2.14
BRF2Q9HAW0 RNU6-203P-201ENST00000384038 104 ntBASIC1.71□□□□□ -2.14
BRF2Q9HAW0 SNORD115-46-201ENST00000390982 71 ntBASIC1.71□□□□□ -2.14
BRF2Q9HAW0 RNU6-1248P-201ENST00000391096 64 ntBASIC1.71□□□□□ -2.14
BRF2Q9HAW0 ELOCP20-201ENST00000422460 345 ntBASIC1.71□□□□□ -2.14
BRF2Q9HAW0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.71□□□□□ -2.14
BRF2Q9HAW0 SNORA31.10-201ENST00000516482 106 ntBASIC1.71□□□□□ -2.14
BRF2Q9HAW0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.71□□□□□ -2.14
BRF2Q9HAW0 AP002004.2-201ENST00000531656 154 ntBASIC1.71□□□□□ -2.14
BRF2Q9HAW0 AC110588.1-201ENST00000559699 137 ntBASIC1.71□□□□□ -2.14
BRF2Q9HAW0 SNORA77B-201ENST00000578179 125 ntBASIC1.71□□□□□ -2.14
BRF2Q9HAW0 AC037487.3-201ENST00000606668 112 ntBASIC1.71□□□□□ -2.14
BRF2Q9HAW0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
BRF2Q9HAW0 SNORD81.1-201ENST00000363064 77 ntBASIC1.7□□□□□ -2.14
BRF2Q9HAW0 Y_RNA.214-201ENST00000364201 112 ntBASIC1.7□□□□□ -2.14
BRF2Q9HAW0 Y_RNA.276-201ENST00000364732 109 ntBASIC1.7□□□□□ -2.14
BRF2Q9HAW0 SNORD116-13-201ENST00000384408 92 ntBASIC1.7□□□□□ -2.14
BRF2Q9HAW0 RNU6-1031P-201ENST00000384773 107 ntBASIC1.7□□□□□ -2.14
BRF2Q9HAW0 AC113618.1-201ENST00000416747 285 ntBASIC1.7□□□□□ -2.14
BRF2Q9HAW0 AL162725.1-201ENST00000435405 301 ntBASIC1.7□□□□□ -2.14
BRF2Q9HAW0 HSPE1P24-201ENST00000450782 238 ntBASIC1.7□□□□□ -2.14
BRF2Q9HAW0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.7□□□□□ -2.14
BRF2Q9HAW0 RNU7-28P-201ENST00000516759 62 ntBASIC1.7□□□□□ -2.14
BRF2Q9HAW0 AC015720.1-201ENST00000565251 277 ntBASIC1.7□□□□□ -2.14
BRF2Q9HAW0 MIR3122-201ENST00000577243 73 ntBASIC1.7□□□□□ -2.14
BRF2Q9HAW0 MIR4285-201ENST00000581001 85 ntBASIC1.7□□□□□ -2.14
BRF2Q9HAW0 MIR8063-201ENST00000621930 81 ntBASIC1.7□□□□□ -2.14
BRF2Q9HAW0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.7□□□□□ -2.14
BRF2Q9HAW0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
BRF2Q9HAW0 SNORD114-1-201ENST00000362705 72 ntBASIC1.69□□□□□ -2.14
BRF2Q9HAW0 Y_RNA.153-201ENST00000363615 91 ntBASIC1.69□□□□□ -2.14
BRF2Q9HAW0 Y_RNA.569-201ENST00000384749 103 ntBASIC1.69□□□□□ -2.14
BRF2Q9HAW0 MIR9-3-201ENST00000385084 90 ntBASIC1.69□□□□□ -2.14
BRF2Q9HAW0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
BRF2Q9HAW0 AL161935.2-201ENST00000414627 60 ntBASIC1.69□□□□□ -2.14
BRF2Q9HAW0 PGBD4P5-201ENST00000445958 426 ntBASIC1.69□□□□□ -2.14
BRF2Q9HAW0 LINC01399-202ENST00000458450 244 ntBASIC1.69□□□□□ -2.14
BRF2Q9HAW0 AL049830.1-201ENST00000468034 425 ntBASIC1.69□□□□□ -2.14
BRF2Q9HAW0 AC010655.3-201ENST00000478818 450 ntBASIC1.69□□□□□ -2.14
BRF2Q9HAW0 RPS29P11-201ENST00000496507 171 ntBASIC1.69□□□□□ -2.14
BRF2Q9HAW0 RNU1-41P-201ENST00000516161 162 ntBASIC1.69□□□□□ -2.14
BRF2Q9HAW0 RNU1-48P-201ENST00000516400 162 ntBASIC1.69□□□□□ -2.14
BRF2Q9HAW0 AL358944.1-201ENST00000528537 144 ntBASIC1.69□□□□□ -2.14
BRF2Q9HAW0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.69□□□□□ -2.14
BRF2Q9HAW0 AC091178.2-201ENST00000584401 117 ntBASIC1.69□□□□□ -2.14
BRF2Q9HAW0 AC005972.2-201ENST00000604690 348 ntBASIC1.69□□□□□ -2.14
BRF2Q9HAW0 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.69□□□□□ -2.14
BRF2Q9HAW0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
BRF2Q9HAW0 SNORA1B-201ENST00000362535 133 ntBASIC1.68□□□□□ -2.14
BRF2Q9HAW0 SNORD48-201ENST00000364953 64 ntBASIC1.68□□□□□ -2.14
BRF2Q9HAW0 RNU6-102P-201ENST00000384485 104 ntBASIC1.68□□□□□ -2.14
BRF2Q9HAW0 RNU6-1160P-201ENST00000384546 104 ntBASIC1.68□□□□□ -2.14
BRF2Q9HAW0 RNU6-713P-201ENST00000384761 107 ntBASIC1.68□□□□□ -2.14
BRF2Q9HAW0 MIR606-201ENST00000384851 96 ntBASIC1.68□□□□□ -2.14
BRF2Q9HAW0 SNORA53-201ENST00000391141 249 ntBASIC1.68□□□□□ -2.14
BRF2Q9HAW0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.68□□□□□ -2.14
BRF2Q9HAW0 AC003989.2-201ENST00000440224 169 ntBASIC1.68□□□□□ -2.14
BRF2Q9HAW0 AC245517.4-201ENST00000448601 281 ntBASIC1.68□□□□□ -2.14
BRF2Q9HAW0 RPS20P10-201ENST00000451209 253 ntBASIC1.68□□□□□ -2.14
BRF2Q9HAW0 RNU6-496P-201ENST00000516145 99 ntBASIC1.68□□□□□ -2.14
BRF2Q9HAW0 Y_RNA.720-201ENST00000517166 92 ntBASIC1.68□□□□□ -2.14
BRF2Q9HAW0 AC004832.4-201ENST00000608952 331 ntBASIC1.68□□□□□ -2.14
BRF2Q9HAW0 AC021506.2-201ENST00000612354 169 ntBASIC1.68□□□□□ -2.14
BRF2Q9HAW0 AC068647.2-201ENST00000637380 353 ntBASIC1.68□□□□□ -2.14
BRF2Q9HAW0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.68□□□□□ -2.14
BRF2Q9HAW0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
BRF2Q9HAW0 Y_RNA.64-201ENST00000362845 102 ntBASIC1.67□□□□□ -2.14
BRF2Q9HAW0 Y_RNA.105-201ENST00000363182 111 ntBASIC1.67□□□□□ -2.14
BRF2Q9HAW0 RNU4-80P-201ENST00000363200 141 ntBASIC1.67□□□□□ -2.14
BRF2Q9HAW0 Y_RNA.172-201ENST00000363765 102 ntBASIC1.67□□□□□ -2.14
BRF2Q9HAW0 RNU6-514P-201ENST00000384208 107 ntBASIC1.67□□□□□ -2.14
BRF2Q9HAW0 MIR583-201ENST00000384846 75 ntBASIC1.67□□□□□ -2.14
BRF2Q9HAW0 MIR194-1-201ENST00000384892 85 ntBASIC1.67□□□□□ -2.14
BRF2Q9HAW0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.67□□□□□ -2.14
BRF2Q9HAW0 AC004965.1-201ENST00000413033 213 ntBASIC1.67□□□□□ -2.14
BRF2Q9HAW0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.67□□□□□ -2.14
BRF2Q9HAW0 RPS4XP11-201ENST00000446897 772 ntBASIC1.67□□□□□ -2.14
BRF2Q9HAW0 UBL5P3-201ENST00000475112 231 ntBASIC1.67□□□□□ -2.14
BRF2Q9HAW0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.67□□□□□ -2.14
BRF2Q9HAW0 AP003733.2-201ENST00000529409 171 ntBASIC1.67□□□□□ -2.14
BRF2Q9HAW0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms