Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC005828.6-201ENST00000606610 232 ntBASIC1.08□□□□□ -2.24
RPAP3Q9H6T3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
RPAP3Q9H6T3 RNU6-199P-201ENST00000362954 107 ntBASIC1.07□□□□□ -2.24
RPAP3Q9H6T3 MIR562-201ENST00000384894 95 ntBASIC1.07□□□□□ -2.24
RPAP3Q9H6T3 MIR873-201ENST00000401120 77 ntBASIC1.07□□□□□ -2.24
RPAP3Q9H6T3 PDCL2P1-201ENST00000419302 352 ntBASIC1.07□□□□□ -2.24
RPAP3Q9H6T3 RPEP5-201ENST00000441137 268 ntBASIC1.07□□□□□ -2.24
RPAP3Q9H6T3 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
RPAP3Q9H6T3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.07□□□□□ -2.24
RPAP3Q9H6T3 RNU7-169P-201ENST00000459456 61 ntBASIC1.07□□□□□ -2.24
RPAP3Q9H6T3 AC048334.1-201ENST00000477975 159 ntBASIC1.07□□□□□ -2.24
RPAP3Q9H6T3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.07□□□□□ -2.24
RPAP3Q9H6T3 RNA5SP436-201ENST00000516020 115 ntBASIC1.07□□□□□ -2.24
RPAP3Q9H6T3 RNU7-12P-201ENST00000516030 62 ntBASIC1.07□□□□□ -2.24
RPAP3Q9H6T3 RNU6-1278P-201ENST00000516130 107 ntBASIC1.07□□□□□ -2.24
RPAP3Q9H6T3 RNU6-917P-201ENST00000516294 104 ntBASIC1.07□□□□□ -2.24
RPAP3Q9H6T3 RNU7-28P-201ENST00000516759 62 ntBASIC1.07□□□□□ -2.24
RPAP3Q9H6T3 AC055872.1-201ENST00000570978 278 ntBASIC1.07□□□□□ -2.24
RPAP3Q9H6T3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.07□□□□□ -2.24
RPAP3Q9H6T3 PVT1_3.1-201ENST00000620853 95 ntBASIC1.07□□□□□ -2.24
RPAP3Q9H6T3 AC127459.3-201ENST00000624328 466 ntBASIC1.07□□□□□ -2.24
RPAP3Q9H6T3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 Y_RNA.166-201ENST00000363730 102 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 RNU6-117P-201ENST00000365415 107 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 SNORA25-201ENST00000384384 134 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 MIR653-201ENST00000385279 96 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 Y_RNA.619-201ENST00000410951 90 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 Y_RNA.646-201ENST00000410980 101 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 RNU6-370P-201ENST00000411008 104 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 AC104332.1-201ENST00000440471 797 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 SNORA31.2-201ENST00000516019 134 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 SNORD116-28-201ENST00000516123 91 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 Y_RNA.691-201ENST00000516611 103 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 AC023442.1-201ENST00000531247 422 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 AP002004.2-201ENST00000531656 154 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 CYP3A137P-201ENST00000562436 69 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 MIR4661-201ENST00000582720 75 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 AL022345.2-201ENST00000606307 135 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 BX284668.6-201ENST00000606899 438 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 U6atac.1-201ENST00000616025 117 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 AC027335.2-201ENST00000624030 375 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 AC098679.4-201ENST00000624241 654 ntBASIC1.06□□□□□ -2.24
RPAP3Q9H6T3 RNU6-961P-201ENST00000363893 105 ntBASIC1.05□□□□□ -2.24
RPAP3Q9H6T3 Y_RNA.243-201ENST00000364481 109 ntBASIC1.05□□□□□ -2.24
RPAP3Q9H6T3 Y_RNA.248-201ENST00000364501 109 ntBASIC1.05□□□□□ -2.24
RPAP3Q9H6T3 MT-TL1-201ENST00000386347 75 ntBASIC1.05□□□□□ -2.24
RPAP3Q9H6T3 SNORD41-201ENST00000386967 70 ntBASIC1.05□□□□□ -2.24
RPAP3Q9H6T3 RNU5A-5P-201ENST00000411054 116 ntBASIC1.05□□□□□ -2.24
RPAP3Q9H6T3 RPL30P15-201ENST00000457129 321 ntBASIC1.05□□□□□ -2.24
RPAP3Q9H6T3 MIR2355-201ENST00000517199 87 ntBASIC1.05□□□□□ -2.24
RPAP3Q9H6T3 AL117336.2-201ENST00000602435 335 ntBASIC1.05□□□□□ -2.24
RPAP3Q9H6T3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.05□□□□□ -2.24
RPAP3Q9H6T3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.05□□□□□ -2.24
RPAP3Q9H6T3 AC004467.1-201ENST00000615678 330 ntBASIC1.05□□□□□ -2.24
RPAP3Q9H6T3 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.05□□□□□ -2.24
RPAP3Q9H6T3 SNORD81.2-201ENST00000365153 76 ntBASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 RNU6-1310P-201ENST00000384153 107 ntBASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 MIR613-201ENST00000385248 95 ntBASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 RNU6-910P-201ENST00000390844 107 ntBASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 RNA5SP482-201ENST00000391269 118 ntBASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 RNU6-1156P-201ENST00000410365 100 ntBASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 Z98949.2-201ENST00000440996 144 ntBASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 Y_RNA.635-201ENST00000459041 101 ntBASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 RPL39P28-201ENST00000465655 155 ntBASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 AL049830.1-201ENST00000468034 425 ntBASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 AC105758.1-201ENST00000506038 399 ntBASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 AC022493.2-201ENST00000506122 481 ntBASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 RNU6-1096P-201ENST00000517089 102 ntBASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 AC090049.2-201ENST00000550377 109 ntBASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 MIR5000-201ENST00000577717 103 ntBASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 AC092794.1-201ENST00000612734 582 ntBASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 AC087588.2-201ENST00000617667 426 ntBASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 TPTEP1-208ENST00000636884 213 ntBASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
RPAP3Q9H6T3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 MIRLET7C-201ENST00000362160 84 ntBASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 RNU4-41P-201ENST00000364426 143 ntBASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 RNU6-310P-201ENST00000384655 107 ntBASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 Y_RNA.577-201ENST00000384794 101 ntBASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 MIR598-201ENST00000384868 97 ntBASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 MIR520G-201ENST00000385064 90 ntBASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 SNORA69.1-201ENST00000390904 137 ntBASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 RNA5SP511-201ENST00000410487 115 ntBASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 POLR2J4-204ENST00000418424 324 ntBASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 MTND4P28-201ENST00000426217 387 ntBASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 SUMO1P2-201ENST00000452524 304 ntBASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 SNORA70.22-201ENST00000517160 124 ntBASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms