Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RPL21P1-201ENST00000399532 476 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.14□□□□□ -2.23
NXF3Q9H4D5 RNU7-94P-201ENST00000459576 63 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 RPS27P22-201ENST00000478056 241 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.14□□□□□ -2.23
NXF3Q9H4D5 AC097462.1-201ENST00000514125 324 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 RNU6-1170P-201ENST00000515974 106 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 SNORA40.14-201ENST00000516543 86 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 RNU4-77P-201ENST00000516692 156 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.14□□□□□ -2.23
NXF3Q9H4D5 AC019288.1-201ENST00000557918 224 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 AC006600.1-201ENST00000572529 153 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 MIR4659A-201ENST00000580269 81 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 AC092447.9-201ENST00000603395 144 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 AL050343.2-201ENST00000607338 280 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 AC011476.5-201ENST00000615594 130 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 AC004467.1-201ENST00000615678 330 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 AL606534.2-204ENST00000635008 178 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 SNORA25.8-201ENST00000364831 128 ntBASIC1.13□□□□□ -2.23
NXF3Q9H4D5 SNORD42.2-201ENST00000365570 69 ntBASIC1.13□□□□□ -2.23
NXF3Q9H4D5 RNU11-5P-201ENST00000391216 129 ntBASIC1.13□□□□□ -2.23
NXF3Q9H4D5 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
NXF3Q9H4D5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.13□□□□□ -2.23
NXF3Q9H4D5 AL161935.2-201ENST00000414627 60 ntBASIC1.13□□□□□ -2.23
NXF3Q9H4D5 COX6CP10-201ENST00000416832 224 ntBASIC1.13□□□□□ -2.23
NXF3Q9H4D5 AL137792.2-201ENST00000443484 235 ntBASIC1.13□□□□□ -2.23
NXF3Q9H4D5 RPL30P7-201ENST00000479312 323 ntBASIC1.13□□□□□ -2.23
NXF3Q9H4D5 RNA5SP20-201ENST00000515976 84 ntBASIC1.13□□□□□ -2.23
NXF3Q9H4D5 Y_RNA.661-201ENST00000516003 99 ntBASIC1.13□□□□□ -2.23
NXF3Q9H4D5 RNU2-12P-201ENST00000517216 168 ntBASIC1.13□□□□□ -2.23
NXF3Q9H4D5 MIR4709-201ENST00000577272 72 ntBASIC1.13□□□□□ -2.23
NXF3Q9H4D5 AC240442.1-201ENST00000616055 283 ntBASIC1.13□□□□□ -2.23
NXF3Q9H4D5 AC010205.1-201ENST00000616668 449 ntBASIC1.13□□□□□ -2.23
NXF3Q9H4D5 AC095038.3-201ENST00000634439 195 ntBASIC1.13□□□□□ -2.23
NXF3Q9H4D5 U6.92-201ENST00000636464 89 ntBASIC1.13□□□□□ -2.23
NXF3Q9H4D5 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
NXF3Q9H4D5 AC018630.2-201ENST00000534866 2403 ntBASIC1.13□□□□□ -2.23
NXF3Q9H4D5 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.12□□□□□ -2.23
NXF3Q9H4D5 Y_RNA.39-201ENST00000362620 98 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 Y_RNA.80-201ENST00000362996 102 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 RNU6-626P-201ENST00000363354 107 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 Y_RNA.394-201ENST00000383942 103 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 RNU6-20P-201ENST00000384106 107 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 Y_RNA.485-201ENST00000384395 102 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 MIR194-1-201ENST00000384892 85 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 MIR518E-201ENST00000385252 88 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 MIR873-201ENST00000401120 77 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 Y_RNA.604-201ENST00000410574 102 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 Y_RNA.639-201ENST00000458981 102 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 RPS23P4-201ENST00000487908 423 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 RNU6-966P-201ENST00000516479 104 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 SNORA31.10-201ENST00000516482 106 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 RNU7-172P-201ENST00000517125 64 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.12□□□□□ -2.23
NXF3Q9H4D5 AC023442.1-201ENST00000531247 422 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 AC015688.6-201ENST00000577737 104 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 MIR5188-201ENST00000583467 113 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 SNORD58B-201ENST00000607313 66 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 uc_338.22-201ENST00000622722 187 ntBASIC1.12□□□□□ -2.23
NXF3Q9H4D5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
NXF3Q9H4D5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
NXF3Q9H4D5 SNORD115-30-201ENST00000364117 82 ntBASIC1.11□□□□□ -2.23
NXF3Q9H4D5 Y_RNA.230-201ENST00000364348 109 ntBASIC1.11□□□□□ -2.23
NXF3Q9H4D5 RNU6-407P-201ENST00000365280 104 ntBASIC1.11□□□□□ -2.23
NXF3Q9H4D5 RNY1P14-201ENST00000384426 108 ntBASIC1.11□□□□□ -2.23
NXF3Q9H4D5 MIR520E-201ENST00000384867 87 ntBASIC1.11□□□□□ -2.23
NXF3Q9H4D5 MRPL42P3-201ENST00000401492 326 ntBASIC1.11□□□□□ -2.23
NXF3Q9H4D5 RNU2-54P-201ENST00000410299 190 ntBASIC1.11□□□□□ -2.23
NXF3Q9H4D5 AC010154.1-201ENST00000425857 269 ntBASIC1.11□□□□□ -2.23
NXF3Q9H4D5 AC245047.3-201ENST00000429428 127 ntBASIC1.11□□□□□ -2.23
NXF3Q9H4D5 AL160004.2-201ENST00000432935 350 ntBASIC1.11□□□□□ -2.23
NXF3Q9H4D5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.11□□□□□ -2.23
NXF3Q9H4D5 RNU6-475P-201ENST00000516073 104 ntBASIC1.11□□□□□ -2.23
NXF3Q9H4D5 MIR3937-201ENST00000580135 106 ntBASIC1.11□□□□□ -2.23
NXF3Q9H4D5 AC005176.2-201ENST00000596933 147 ntBASIC1.11□□□□□ -2.23
NXF3Q9H4D5 AL929325.1-201ENST00000603096 117 ntBASIC1.11□□□□□ -2.23
NXF3Q9H4D5 AL390123.1-201ENST00000603216 237 ntBASIC1.11□□□□□ -2.23
NXF3Q9H4D5 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.11□□□□□ -2.23
NXF3Q9H4D5 MIR8054-201ENST00000620877 86 ntBASIC1.11□□□□□ -2.23
NXF3Q9H4D5 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.11□□□□□ -2.23
NXF3Q9H4D5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.11□□□□□ -2.23
NXF3Q9H4D5 Y_RNA.61-201ENST00000362835 102 ntBASIC1.1□□□□□ -2.23
NXF3Q9H4D5 Y_RNA.101-201ENST00000363154 102 ntBASIC1.1□□□□□ -2.23
NXF3Q9H4D5 Y_RNA.124-201ENST00000363339 93 ntBASIC1.1□□□□□ -2.23
NXF3Q9H4D5 RNU4-38P-201ENST00000364472 129 ntBASIC1.1□□□□□ -2.23
NXF3Q9H4D5 RNU6-117P-201ENST00000365415 107 ntBASIC1.1□□□□□ -2.23
NXF3Q9H4D5 Y_RNA.355-201ENST00000365462 98 ntBASIC1.1□□□□□ -2.23
NXF3Q9H4D5 RNU6-308P-201ENST00000390957 107 ntBASIC1.1□□□□□ -2.23
NXF3Q9H4D5 RN7SKP200-201ENST00000410564 320 ntBASIC1.1□□□□□ -2.23
NXF3Q9H4D5 RNU6-1199P-201ENST00000411249 104 ntBASIC1.1□□□□□ -2.23
NXF3Q9H4D5 RPS27P16-201ENST00000425758 201 ntBASIC1.1□□□□□ -2.23
NXF3Q9H4D5 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.1□□□□□ -2.23
NXF3Q9H4D5 RPL21P9-201ENST00000556149 474 ntBASIC1.1□□□□□ -2.23
NXF3Q9H4D5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
NXF3Q9H4D5 AC006380.1-201ENST00000603598 186 ntBASIC1.1□□□□□ -2.23
NXF3Q9H4D5 AC006157.1-201ENST00000611750 366 ntBASIC1.1□□□□□ -2.23
NXF3Q9H4D5 AC127459.3-201ENST00000624328 466 ntBASIC1.1□□□□□ -2.23
NXF3Q9H4D5 MIR6079-201ENST00000635807 62 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms