Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 AC011195.1-201ENST00000578177 177 ntBASIC0.3□□□□□ -2.36
ALX4Q9H161 AL109933.3-201ENST00000619095 188 ntBASIC0.3□□□□□ -2.36
ALX4Q9H161 AL359880.1-201ENST00000621879 266 ntBASIC0.3□□□□□ -2.36
ALX4Q9H161 U6.115-201ENST00000636045 103 ntBASIC0.3□□□□□ -2.36
ALX4Q9H161 AC090582.1-201ENST00000636321 199 ntBASIC0.3□□□□□ -2.36
ALX4Q9H161 MIR410-201ENST00000362222 80 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 Y_RNA.85-201ENST00000363014 111 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 SNORD68-201ENST00000363214 84 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 RNA5SP48-201ENST00000363969 126 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 Y_RNA.212-201ENST00000364177 102 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 RNU6-1297P-201ENST00000384415 104 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 MIR329-1-201ENST00000385028 80 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 RNU6-1001P-201ENST00000411265 100 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 RNU7-66P-201ENST00000459469 62 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 AC074133.1-201ENST00000515696 183 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 RNU7-41P-201ENST00000515917 61 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 RN7SKP164-201ENST00000516138 266 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 RNU11-2P-201ENST00000516898 142 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 AC036111.3-201ENST00000526389 112 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 AC023442.1-201ENST00000531247 422 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 MIR3672-201ENST00000584290 82 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 AL162413.1-201ENST00000603198 110 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 RNU6-94P-201ENST00000607728 107 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 AC124864.2-201ENST00000624736 186 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.29□□□□□ -2.36
ALX4Q9H161 AC134026.1-201ENST00000623249 2239 ntBASIC0.28□□□□□ -2.36
ALX4Q9H161 RNU6-222P-201ENST00000362438 107 ntBASIC0.28□□□□□ -2.36
ALX4Q9H161 SNORD114-7-201ENST00000362520 77 ntBASIC0.28□□□□□ -2.36
ALX4Q9H161 Y_RNA.106-201ENST00000363189 100 ntBASIC0.28□□□□□ -2.36
ALX4Q9H161 U8.5-201ENST00000364528 136 ntBASIC0.28□□□□□ -2.36
ALX4Q9H161 Y_RNA.295-201ENST00000364918 102 ntBASIC0.28□□□□□ -2.36
ALX4Q9H161 SNORD116-11-201ENST00000383882 92 ntBASIC0.28□□□□□ -2.36
ALX4Q9H161 SNORD116-8-201ENST00000384365 95 ntBASIC0.28□□□□□ -2.36
ALX4Q9H161 RNU6-136P-201ENST00000384663 107 ntBASIC0.28□□□□□ -2.36
ALX4Q9H161 MIR15B-201ENST00000385045 98 ntBASIC0.28□□□□□ -2.36
ALX4Q9H161 MIR136-201ENST00000385207 82 ntBASIC0.28□□□□□ -2.36
ALX4Q9H161 RNU6-994P-201ENST00000410507 111 ntBASIC0.28□□□□□ -2.36
ALX4Q9H161 RNA5SP222-201ENST00000411039 105 ntBASIC0.28□□□□□ -2.36
ALX4Q9H161 RNU6-1281P-201ENST00000516223 105 ntBASIC0.28□□□□□ -2.36
ALX4Q9H161 AF235103.2-201ENST00000525753 346 ntBASIC0.28□□□□□ -2.36
ALX4Q9H161 AC005828.6-201ENST00000606610 232 ntBASIC0.28□□□□□ -2.36
ALX4Q9H161 AC078883.4-201ENST00000623218 367 ntBASIC0.28□□□□□ -2.36
ALX4Q9H161 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
ALX4Q9H161 SNORD14.1-201ENST00000365609 90 ntBASIC0.27□□□□□ -2.37
ALX4Q9H161 RNU6-259P-201ENST00000383999 107 ntBASIC0.27□□□□□ -2.37
ALX4Q9H161 RNU6-1145P-201ENST00000384246 107 ntBASIC0.27□□□□□ -2.37
ALX4Q9H161 RNU6-1119P-201ENST00000384349 108 ntBASIC0.27□□□□□ -2.37
ALX4Q9H161 RNA5SP127-201ENST00000411051 133 ntBASIC0.27□□□□□ -2.37
ALX4Q9H161 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.27□□□□□ -2.37
ALX4Q9H161 EIF1P2-201ENST00000428233 350 ntBASIC0.27□□□□□ -2.37
ALX4Q9H161 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
ALX4Q9H161 RNU7-43P-201ENST00000516554 64 ntBASIC0.27□□□□□ -2.37
ALX4Q9H161 OSBPL9P5-201ENST00000542581 171 ntBASIC0.27□□□□□ -2.37
ALX4Q9H161 MIR4764-201ENST00000580680 88 ntBASIC0.27□□□□□ -2.37
ALX4Q9H161 MIR4762-201ENST00000585261 75 ntBASIC0.27□□□□□ -2.37
ALX4Q9H161 NBR2-204ENST00000587322 63 ntBASIC0.27□□□□□ -2.37
ALX4Q9H161 AC125232.2-201ENST00000592457 143 ntBASIC0.27□□□□□ -2.37
ALX4Q9H161 AC104260.1-201ENST00000616660 539 ntBASIC0.27□□□□□ -2.37
ALX4Q9H161 MTND5P16-201ENST00000460269 1703 ntBASIC0.27□□□□□ -2.37
ALX4Q9H161 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.26□□□□□ -2.37
ALX4Q9H161 Y_RNA.256-201ENST00000364594 104 ntBASIC0.26□□□□□ -2.37
ALX4Q9H161 SNORD113.3-201ENST00000364630 78 ntBASIC0.26□□□□□ -2.37
ALX4Q9H161 AC117470.1-201ENST00000381974 330 ntBASIC0.26□□□□□ -2.37
ALX4Q9H161 SNORA36.2-201ENST00000384004 127 ntBASIC0.26□□□□□ -2.37
ALX4Q9H161 Y_RNA.414-201ENST00000384011 101 ntBASIC0.26□□□□□ -2.37
ALX4Q9H161 Y_RNA.498-201ENST00000384460 102 ntBASIC0.26□□□□□ -2.37
ALX4Q9H161 RNU6-306P-201ENST00000384617 107 ntBASIC0.26□□□□□ -2.37
ALX4Q9H161 MIR516B2-201ENST00000385190 85 ntBASIC0.26□□□□□ -2.37
ALX4Q9H161 SNORD105-201ENST00000386910 85 ntBASIC0.26□□□□□ -2.37
ALX4Q9H161 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
ALX4Q9H161 MIR1827-201ENST00000408549 66 ntBASIC0.26□□□□□ -2.37
ALX4Q9H161 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.26□□□□□ -2.37
ALX4Q9H161 MIR1197-201ENST00000408818 88 ntBASIC0.26□□□□□ -2.37
ALX4Q9H161 RNU6-908P-201ENST00000410160 94 ntBASIC0.26□□□□□ -2.37
ALX4Q9H161 MTCO2P12-201ENST00000427426 682 ntBASIC0.26□□□□□ -2.37
ALX4Q9H161 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.26□□□□□ -2.37
ALX4Q9H161 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.26□□□□□ -2.37
ALX4Q9H161 AC018448.1-201ENST00000552843 316 ntBASIC0.26□□□□□ -2.37
ALX4Q9H161 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
ALX4Q9H161 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.25□□□□□ -2.37
ALX4Q9H161 Y_RNA.251-201ENST00000364551 99 ntBASIC0.25□□□□□ -2.37
ALX4Q9H161 RNA5SP475-201ENST00000410568 110 ntBASIC0.25□□□□□ -2.37
ALX4Q9H161 RNU2-70P-201ENST00000410718 179 ntBASIC0.25□□□□□ -2.37
ALX4Q9H161 Y_RNA.621-201ENST00000411065 96 ntBASIC0.25□□□□□ -2.37
ALX4Q9H161 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.25□□□□□ -2.37
ALX4Q9H161 MRPS18CP6-201ENST00000423587 223 ntBASIC0.25□□□□□ -2.37
ALX4Q9H161 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.25□□□□□ -2.37
ALX4Q9H161 ELOCP24-201ENST00000456370 334 ntBASIC0.25□□□□□ -2.37
ALX4Q9H161 AC002350.1-201ENST00000490759 375 ntBASIC0.25□□□□□ -2.37
ALX4Q9H161 RNU6-63P-201ENST00000516690 95 ntBASIC0.25□□□□□ -2.37
ALX4Q9H161 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.25□□□□□ -2.37
ALX4Q9H161 AL357075.2-201ENST00000614906 189 ntBASIC0.25□□□□□ -2.37
ALX4Q9H161 AL591926.4-201ENST00000616895 298 ntBASIC0.25□□□□□ -2.37
ALX4Q9H161 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
ALX4Q9H161 RNA5SP257-201ENST00000363023 116 ntBASIC0.24□□□□□ -2.37
ALX4Q9H161 RNY1P8-201ENST00000383970 114 ntBASIC0.24□□□□□ -2.37
ALX4Q9H161 RNU6-483P-201ENST00000384088 108 ntBASIC0.24□□□□□ -2.37
ALX4Q9H161 AL354751.2-201ENST00000415471 210 ntBASIC0.24□□□□□ -2.37
ALX4Q9H161 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.24□□□□□ -2.37
ALX4Q9H161 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms