Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TRIM55Q9BYV6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TRIM55Q9BYV6 MIR367-201ENST00000362299 68 ntBASIC2.72□□□□□ -1.97
TRIM55Q9BYV6 SNORA67.1-201ENST00000364749 141 ntBASIC2.72□□□□□ -1.97
TRIM55Q9BYV6 RNU6-47P-201ENST00000383866 107 ntBASIC2.72□□□□□ -1.97
TRIM55Q9BYV6 MIR626-201ENST00000385032 94 ntBASIC2.72□□□□□ -1.97
TRIM55Q9BYV6 MIR524-201ENST00000385242 87 ntBASIC2.72□□□□□ -1.97
TRIM55Q9BYV6 SUMO1P4-201ENST00000429430 302 ntBASIC2.72□□□□□ -1.97
TRIM55Q9BYV6 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.72□□□□□ -1.97
TRIM55Q9BYV6 RNU6-341P-201ENST00000516973 96 ntBASIC2.72□□□□□ -1.97
TRIM55Q9BYV6 AC021269.2-201ENST00000532318 330 ntBASIC2.72□□□□□ -1.97
TRIM55Q9BYV6 AC079600.2-201ENST00000550076 130 ntBASIC2.72□□□□□ -1.97
TRIM55Q9BYV6 MIR4724-201ENST00000579485 89 ntBASIC2.72□□□□□ -1.97
TRIM55Q9BYV6 AL929325.1-201ENST00000603096 117 ntBASIC2.72□□□□□ -1.97
TRIM55Q9BYV6 AC010297.1-201ENST00000623948 149 ntBASIC2.72□□□□□ -1.97
TRIM55Q9BYV6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TRIM55Q9BYV6 RNU4-82P-201ENST00000362443 140 ntBASIC2.71□□□□□ -1.98
TRIM55Q9BYV6 RNU6-674P-201ENST00000363831 107 ntBASIC2.71□□□□□ -1.98
TRIM55Q9BYV6 Y_RNA.267-201ENST00000364679 109 ntBASIC2.71□□□□□ -1.98
TRIM55Q9BYV6 RNU6-851P-201ENST00000384565 107 ntBASIC2.71□□□□□ -1.98
TRIM55Q9BYV6 SNORD23.1-201ENST00000408212 104 ntBASIC2.71□□□□□ -1.98
TRIM55Q9BYV6 RNU6-383P-201ENST00000410864 94 ntBASIC2.71□□□□□ -1.98
TRIM55Q9BYV6 COX6CP10-201ENST00000416832 224 ntBASIC2.71□□□□□ -1.98
TRIM55Q9BYV6 AC087499.2-201ENST00000432861 149 ntBASIC2.71□□□□□ -1.98
TRIM55Q9BYV6 AL606517.2-201ENST00000442855 241 ntBASIC2.71□□□□□ -1.98
TRIM55Q9BYV6 AC233266.1-201ENST00000454518 96 ntBASIC2.71□□□□□ -1.98
TRIM55Q9BYV6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.71□□□□□ -1.98
TRIM55Q9BYV6 RNU6-182P-201ENST00000516970 105 ntBASIC2.71□□□□□ -1.98
TRIM55Q9BYV6 AC022217.4-201ENST00000604389 163 ntBASIC2.71□□□□□ -1.98
TRIM55Q9BYV6 AC242852.1-201ENST00000612151 96 ntBASIC2.71□□□□□ -1.98
TRIM55Q9BYV6 AC004792.1-201ENST00000614523 137 ntBASIC2.71□□□□□ -1.98
TRIM55Q9BYV6 AC244015.1-201ENST00000622301 99 ntBASIC2.71□□□□□ -1.98
TRIM55Q9BYV6 AC096644.4-201ENST00000563417 2912 ntBASIC2.7□□□□□ -1.98
TRIM55Q9BYV6 Y_RNA.24-201ENST00000362508 103 ntBASIC2.7□□□□□ -1.98
TRIM55Q9BYV6 Y_RNA.572-201ENST00000384757 98 ntBASIC2.7□□□□□ -1.98
TRIM55Q9BYV6 RNU6-918P-201ENST00000391219 106 ntBASIC2.7□□□□□ -1.98
TRIM55Q9BYV6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.7□□□□□ -1.98
TRIM55Q9BYV6 RNU2-19P-201ENST00000517288 84 ntBASIC2.7□□□□□ -1.98
TRIM55Q9BYV6 AP002392.1-201ENST00000537692 208 ntBASIC2.7□□□□□ -1.98
TRIM55Q9BYV6 MIR5688-201ENST00000580619 83 ntBASIC2.7□□□□□ -1.98
TRIM55Q9BYV6 MIR3945-201ENST00000581853 98 ntBASIC2.7□□□□□ -1.98
TRIM55Q9BYV6 AL365434.2-201ENST00000607979 234 ntBASIC2.7□□□□□ -1.98
TRIM55Q9BYV6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TRIM55Q9BYV6 MIR6073-201ENST00000352083 89 ntBASIC2.69□□□□□ -1.98
TRIM55Q9BYV6 RNU6-969P-201ENST00000383900 105 ntBASIC2.69□□□□□ -1.98
TRIM55Q9BYV6 MIR562-201ENST00000384894 95 ntBASIC2.69□□□□□ -1.98
TRIM55Q9BYV6 RNA5SP109-201ENST00000391010 116 ntBASIC2.69□□□□□ -1.98
TRIM55Q9BYV6 RNU6-381P-201ENST00000391259 108 ntBASIC2.69□□□□□ -1.98
TRIM55Q9BYV6 RNU2-52P-201ENST00000410680 190 ntBASIC2.69□□□□□ -1.98
TRIM55Q9BYV6 RPS27P1-201ENST00000450552 247 ntBASIC2.69□□□□□ -1.98
TRIM55Q9BYV6 AC055731.1-201ENST00000474387 401 ntBASIC2.69□□□□□ -1.98
TRIM55Q9BYV6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.69□□□□□ -1.98
TRIM55Q9BYV6 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.69□□□□□ -1.98
TRIM55Q9BYV6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
TRIM55Q9BYV6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
TRIM55Q9BYV6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
TRIM55Q9BYV6 snoU2_19.4-201ENST00000364329 80 ntBASIC2.68□□□□□ -1.98
TRIM55Q9BYV6 RNU1-51P-201ENST00000365345 176 ntBASIC2.68□□□□□ -1.98
TRIM55Q9BYV6 RNU6-1080P-201ENST00000383982 107 ntBASIC2.68□□□□□ -1.98
TRIM55Q9BYV6 Y_RNA.621-201ENST00000411065 96 ntBASIC2.68□□□□□ -1.98
TRIM55Q9BYV6 AC063976.3-201ENST00000426849 329 ntBASIC2.68□□□□□ -1.98
TRIM55Q9BYV6 AC245047.3-201ENST00000429428 127 ntBASIC2.68□□□□□ -1.98
TRIM55Q9BYV6 AC069257.2-201ENST00000441819 155 ntBASIC2.68□□□□□ -1.98
TRIM55Q9BYV6 RNU7-120P-201ENST00000459334 63 ntBASIC2.68□□□□□ -1.98
TRIM55Q9BYV6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.68□□□□□ -1.98
TRIM55Q9BYV6 AC022559.1-201ENST00000520905 205 ntBASIC2.68□□□□□ -1.98
TRIM55Q9BYV6 SUB1P4-201ENST00000566062 339 ntBASIC2.68□□□□□ -1.98
TRIM55Q9BYV6 AC098479.1-201ENST00000609225 154 ntBASIC2.68□□□□□ -1.98
TRIM55Q9BYV6 U1.36-201ENST00000620684 176 ntBASIC2.68□□□□□ -1.98
TRIM55Q9BYV6 AC012640.5-201ENST00000623897 319 ntBASIC2.68□□□□□ -1.98
TRIM55Q9BYV6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM55Q9BYV6 Y_RNA.203-201ENST00000364106 102 ntBASIC2.67□□□□□ -1.98
TRIM55Q9BYV6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM55Q9BYV6 SNORD109B-201ENST00000458961 67 ntBASIC2.67□□□□□ -1.98
TRIM55Q9BYV6 SNORD109A-201ENST00000459128 67 ntBASIC2.67□□□□□ -1.98
TRIM55Q9BYV6 AC107393.1-201ENST00000512403 346 ntBASIC2.67□□□□□ -1.98
TRIM55Q9BYV6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM55Q9BYV6 AL358944.1-201ENST00000528537 144 ntBASIC2.67□□□□□ -1.98
TRIM55Q9BYV6 AP002004.2-201ENST00000531656 154 ntBASIC2.67□□□□□ -1.98
TRIM55Q9BYV6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM55Q9BYV6 Y_RNA.7-201ENST00000362352 102 ntBASIC2.66□□□□□ -1.98
TRIM55Q9BYV6 SNORA1B-201ENST00000362535 133 ntBASIC2.66□□□□□ -1.98
TRIM55Q9BYV6 SNORA63D-201ENST00000364359 132 ntBASIC2.66□□□□□ -1.98
TRIM55Q9BYV6 Y_RNA.270-201ENST00000364693 104 ntBASIC2.66□□□□□ -1.98
TRIM55Q9BYV6 Y_RNA.435-201ENST00000384095 112 ntBASIC2.66□□□□□ -1.98
TRIM55Q9BYV6 AL603908.1-201ENST00000406098 201 ntBASIC2.66□□□□□ -1.98
TRIM55Q9BYV6 RN7SKP164-201ENST00000516138 266 ntBASIC2.66□□□□□ -1.98
TRIM55Q9BYV6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.66□□□□□ -1.98
TRIM55Q9BYV6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM55Q9BYV6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.66□□□□□ -1.98
TRIM55Q9BYV6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
TRIM55Q9BYV6 Y_RNA.229-201ENST00000364347 113 ntBASIC2.65□□□□□ -1.99
TRIM55Q9BYV6 RNU4-41P-201ENST00000364426 143 ntBASIC2.65□□□□□ -1.99
TRIM55Q9BYV6 RNU4-70P-201ENST00000384579 139 ntBASIC2.65□□□□□ -1.99
TRIM55Q9BYV6 Y_RNA.571-201ENST00000384753 98 ntBASIC2.65□□□□□ -1.99
TRIM55Q9BYV6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
TRIM55Q9BYV6 RNA5SP210-201ENST00000391034 120 ntBASIC2.65□□□□□ -1.99
TRIM55Q9BYV6 MIR1278-201ENST00000408753 81 ntBASIC2.65□□□□□ -1.99
TRIM55Q9BYV6 RNA5SP181-201ENST00000410246 98 ntBASIC2.65□□□□□ -1.99
TRIM55Q9BYV6 RNU2-2P-201ENST00000410396 191 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms