Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 Y_RNA.361-201ENST00000365515 120 ntBASIC1.04□□□□□ -2.24
NDUFAF3Q9BU61 Y_RNA.387-201ENST00000383918 102 ntBASIC1.04□□□□□ -2.24
NDUFAF3Q9BU61 MIR628-201ENST00000385229 95 ntBASIC1.04□□□□□ -2.24
NDUFAF3Q9BU61 SNORD41-201ENST00000386967 70 ntBASIC1.04□□□□□ -2.24
NDUFAF3Q9BU61 SNORD78.2-201ENST00000391076 69 ntBASIC1.04□□□□□ -2.24
NDUFAF3Q9BU61 RNU2-54P-201ENST00000410299 190 ntBASIC1.04□□□□□ -2.24
NDUFAF3Q9BU61 Y_RNA.621-201ENST00000411065 96 ntBASIC1.04□□□□□ -2.24
NDUFAF3Q9BU61 AL354695.1-201ENST00000427935 228 ntBASIC1.04□□□□□ -2.24
NDUFAF3Q9BU61 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.04□□□□□ -2.24
NDUFAF3Q9BU61 AC104332.1-201ENST00000440471 797 ntBASIC1.04□□□□□ -2.24
NDUFAF3Q9BU61 SNRPGP13-201ENST00000442212 177 ntBASIC1.04□□□□□ -2.24
NDUFAF3Q9BU61 HSPE1P13-201ENST00000451143 297 ntBASIC1.04□□□□□ -2.24
NDUFAF3Q9BU61 AC048334.1-201ENST00000477975 159 ntBASIC1.04□□□□□ -2.24
NDUFAF3Q9BU61 SNORA31.2-201ENST00000516019 134 ntBASIC1.04□□□□□ -2.24
NDUFAF3Q9BU61 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
NDUFAF3Q9BU61 AC005176.2-201ENST00000596933 147 ntBASIC1.04□□□□□ -2.24
NDUFAF3Q9BU61 U2.1-201ENST00000618978 145 ntBASIC1.04□□□□□ -2.24
NDUFAF3Q9BU61 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
NDUFAF3Q9BU61 RNU6-490P-201ENST00000362985 107 ntBASIC1.03□□□□□ -2.24
NDUFAF3Q9BU61 Y_RNA.390-201ENST00000383932 102 ntBASIC1.03□□□□□ -2.24
NDUFAF3Q9BU61 RNU6-20P-201ENST00000384106 107 ntBASIC1.03□□□□□ -2.24
NDUFAF3Q9BU61 SNORA70.7-201ENST00000384159 133 ntBASIC1.03□□□□□ -2.24
NDUFAF3Q9BU61 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
NDUFAF3Q9BU61 AL031003.1-201ENST00000404229 172 ntBASIC1.03□□□□□ -2.24
NDUFAF3Q9BU61 RNU6-321P-201ENST00000410912 106 ntBASIC1.03□□□□□ -2.24
NDUFAF3Q9BU61 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.03□□□□□ -2.24
NDUFAF3Q9BU61 AL162725.1-201ENST00000435405 301 ntBASIC1.03□□□□□ -2.24
NDUFAF3Q9BU61 AC099799.1-201ENST00000439809 192 ntBASIC1.03□□□□□ -2.24
NDUFAF3Q9BU61 RPEP5-201ENST00000441137 268 ntBASIC1.03□□□□□ -2.24
NDUFAF3Q9BU61 SNORA31.4-201ENST00000516049 129 ntBASIC1.03□□□□□ -2.24
NDUFAF3Q9BU61 RNU6-1116P-201ENST00000517269 99 ntBASIC1.03□□□□□ -2.24
NDUFAF3Q9BU61 AC068338.1-201ENST00000565567 176 ntBASIC1.03□□□□□ -2.24
NDUFAF3Q9BU61 MIR4421-201ENST00000578133 69 ntBASIC1.03□□□□□ -2.24
NDUFAF3Q9BU61 MIR4659A-201ENST00000580269 81 ntBASIC1.03□□□□□ -2.24
NDUFAF3Q9BU61 AC011476.5-201ENST00000615594 130 ntBASIC1.03□□□□□ -2.24
NDUFAF3Q9BU61 AC240442.1-201ENST00000616055 283 ntBASIC1.03□□□□□ -2.24
NDUFAF3Q9BU61 AC027335.2-201ENST00000624030 375 ntBASIC1.03□□□□□ -2.24
NDUFAF3Q9BU61 SNORD68-201ENST00000363214 84 ntBASIC1.02□□□□□ -2.25
NDUFAF3Q9BU61 RNU6-324P-201ENST00000363957 106 ntBASIC1.02□□□□□ -2.25
NDUFAF3Q9BU61 RNU4-13P-201ENST00000364019 141 ntBASIC1.02□□□□□ -2.25
NDUFAF3Q9BU61 Y_RNA.384-201ENST00000383909 102 ntBASIC1.02□□□□□ -2.25
NDUFAF3Q9BU61 RNU6-1080P-201ENST00000383982 107 ntBASIC1.02□□□□□ -2.25
NDUFAF3Q9BU61 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.02□□□□□ -2.25
NDUFAF3Q9BU61 MIR891A-201ENST00000401237 79 ntBASIC1.02□□□□□ -2.25
NDUFAF3Q9BU61 RNU6-1054P-201ENST00000411293 104 ntBASIC1.02□□□□□ -2.25
NDUFAF3Q9BU61 MRPL35P3-201ENST00000421557 364 ntBASIC1.02□□□□□ -2.25
NDUFAF3Q9BU61 AC096644.2-201ENST00000429278 159 ntBASIC1.02□□□□□ -2.25
NDUFAF3Q9BU61 AC005840.1-201ENST00000498412 377 ntBASIC1.02□□□□□ -2.25
NDUFAF3Q9BU61 RNU6-1012P-201ENST00000516606 109 ntBASIC1.02□□□□□ -2.25
NDUFAF3Q9BU61 AL357312.1-201ENST00000603879 298 ntBASIC1.02□□□□□ -2.25
NDUFAF3Q9BU61 Y_RNA.238-201ENST00000364441 102 ntBASIC1.01□□□□□ -2.25
NDUFAF3Q9BU61 Y_RNA.327-201ENST00000365201 102 ntBASIC1.01□□□□□ -2.25
NDUFAF3Q9BU61 RNU6-163P-201ENST00000384396 106 ntBASIC1.01□□□□□ -2.25
NDUFAF3Q9BU61 MIR559-201ENST00000385188 96 ntBASIC1.01□□□□□ -2.25
NDUFAF3Q9BU61 RNU6-910P-201ENST00000390844 107 ntBASIC1.01□□□□□ -2.25
NDUFAF3Q9BU61 MIR1285-1-201ENST00000408593 84 ntBASIC1.01□□□□□ -2.25
NDUFAF3Q9BU61 RPS4XP11-201ENST00000446897 772 ntBASIC1.01□□□□□ -2.25
NDUFAF3Q9BU61 RPL39P39-201ENST00000455840 151 ntBASIC1.01□□□□□ -2.25
NDUFAF3Q9BU61 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.01□□□□□ -2.25
NDUFAF3Q9BU61 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.01□□□□□ -2.25
NDUFAF3Q9BU61 RNU6-277P-201ENST00000516272 106 ntBASIC1.01□□□□□ -2.25
NDUFAF3Q9BU61 RNU6-155P-201ENST00000516347 100 ntBASIC1.01□□□□□ -2.25
NDUFAF3Q9BU61 RNU6-911P-201ENST00000516523 104 ntBASIC1.01□□□□□ -2.25
NDUFAF3Q9BU61 RNU6-699P-201ENST00000517081 110 ntBASIC1.01□□□□□ -2.25
NDUFAF3Q9BU61 UBE2V2P2-201ENST00000587677 504 ntBASIC1.01□□□□□ -2.25
NDUFAF3Q9BU61 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
NDUFAF3Q9BU61 RNU6-833P-201ENST00000363486 107 ntBASIC1□□□□□ -2.25
NDUFAF3Q9BU61 Y_RNA.446-201ENST00000384178 104 ntBASIC1□□□□□ -2.25
NDUFAF3Q9BU61 RNU6-1105P-201ENST00000384774 107 ntBASIC1□□□□□ -2.25
NDUFAF3Q9BU61 RNY4P36-201ENST00000391116 96 ntBASIC1□□□□□ -2.25
NDUFAF3Q9BU61 RNA5SP247-201ENST00000411181 105 ntBASIC1□□□□□ -2.25
NDUFAF3Q9BU61 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1□□□□□ -2.25
NDUFAF3Q9BU61 PIGPP3-201ENST00000425307 415 ntBASIC1□□□□□ -2.25
NDUFAF3Q9BU61 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1□□□□□ -2.25
NDUFAF3Q9BU61 AC245047.7-201ENST00000440265 293 ntBASIC1□□□□□ -2.25
NDUFAF3Q9BU61 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1□□□□□ -2.25
NDUFAF3Q9BU61 OR2A41P-201ENST00000473586 105 ntBASIC1□□□□□ -2.25
NDUFAF3Q9BU61 SNORD116-28-201ENST00000516123 91 ntBASIC1□□□□□ -2.25
NDUFAF3Q9BU61 Y_RNA.718-201ENST00000517110 102 ntBASIC1□□□□□ -2.25
NDUFAF3Q9BU61 AC005730.3-201ENST00000583067 366 ntBASIC1□□□□□ -2.25
NDUFAF3Q9BU61 FAM106DP-201ENST00000586416 501 ntBASIC1□□□□□ -2.25
NDUFAF3Q9BU61 AC120024.3-201ENST00000603167 156 ntBASIC1□□□□□ -2.25
NDUFAF3Q9BU61 MIR6078-201ENST00000611069 100 ntBASIC1□□□□□ -2.25
NDUFAF3Q9BU61 AL353770.2-201ENST00000620024 78 ntBASIC1□□□□□ -2.25
NDUFAF3Q9BU61 AC138305.3-201ENST00000624988 240 ntBASIC1□□□□□ -2.25
NDUFAF3Q9BU61 MIR1302-1-201ENST00000637932 143 ntBASIC1□□□□□ -2.25
NDUFAF3Q9BU61 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1□□□□□ -2.25
NDUFAF3Q9BU61 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
NDUFAF3Q9BU61 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
NDUFAF3Q9BU61 RNU4-79P-201ENST00000362764 141 ntBASIC0.99□□□□□ -2.25
NDUFAF3Q9BU61 RNU6-1040P-201ENST00000383974 107 ntBASIC0.99□□□□□ -2.25
NDUFAF3Q9BU61 RNU6-708P-201ENST00000384217 107 ntBASIC0.99□□□□□ -2.25
NDUFAF3Q9BU61 SNORD116-13-201ENST00000384408 92 ntBASIC0.99□□□□□ -2.25
NDUFAF3Q9BU61 SNORD116-29-201ENST00000384516 83 ntBASIC0.99□□□□□ -2.25
NDUFAF3Q9BU61 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.99□□□□□ -2.25
NDUFAF3Q9BU61 LINC01399-202ENST00000458450 244 ntBASIC0.99□□□□□ -2.25
NDUFAF3Q9BU61 CYCTP-201ENST00000504253 315 ntBASIC0.99□□□□□ -2.25
NDUFAF3Q9BU61 AC090821.2-201ENST00000523552 176 ntBASIC0.99□□□□□ -2.25
NDUFAF3Q9BU61 AC011604.1-201ENST00000545978 196 ntBASIC0.99□□□□□ -2.25
NDUFAF3Q9BU61 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms