Protein–RNA interactions for Protein: Q9BRN9

TM2D3, TM2 domain-containing protein 3, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3Q9BRN9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 RNU4-38P-201ENST00000364472 129 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 RNU6-1187P-201ENST00000364771 110 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 Y_RNA.303-201ENST00000364998 94 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 SNORD116-29-201ENST00000384516 83 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 RNU6-376P-201ENST00000384731 106 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 MIR532-201ENST00000385025 91 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 U8.16-201ENST00000391279 133 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 SNORA75.6-201ENST00000391318 127 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 Y_RNA.592-201ENST00000410274 109 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 RNU6-1156P-201ENST00000410365 100 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 RN7SKP200-201ENST00000410564 320 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 AC138393.2-201ENST00000414742 246 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 AC114482.1-201ENST00000418010 247 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 SNX2P2-201ENST00000424553 323 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 AL137792.2-201ENST00000443484 235 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 CHEK2P4-201ENST00000450340 246 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 RNA5SP168-201ENST00000516642 112 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 RN7SKP88-201ENST00000516847 250 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 MIR3664-201ENST00000579074 99 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 AC091178.2-201ENST00000584401 117 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 AL355073.2-201ENST00000612106 557 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 7SK.8-201ENST00000612110 250 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 AC025253.1-201ENST00000613623 543 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 7SK.11-201ENST00000615477 250 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 AC084781.2-201ENST00000615568 161 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 7SK.13-201ENST00000622040 250 ntBASIC0.73□□□□□ -2.29
TM2D3Q9BRN9 Y_RNA.101-201ENST00000363154 102 ntBASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 Y_RNA.172-201ENST00000363765 102 ntBASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 Y_RNA.265-201ENST00000364677 108 ntBASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 RNU6-117P-201ENST00000365415 107 ntBASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 AL034345.1-201ENST00000407768 123 ntBASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 AC098614.3-201ENST00000438957 440 ntBASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 AC233266.1-201ENST00000454518 96 ntBASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 OR9P1P-201ENST00000496431 281 ntBASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 RNU6-277P-201ENST00000516272 106 ntBASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 RNU6-917P-201ENST00000516294 104 ntBASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 MIR5000-201ENST00000577717 103 ntBASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 AC005899.2-201ENST00000584353 90 ntBASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 AC242852.1-201ENST00000612151 96 ntBASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 AC004467.1-201ENST00000615678 330 ntBASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 AC073349.3-201ENST00000617616 186 ntBASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 AC244015.1-201ENST00000622301 99 ntBASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 AC099654.14-201ENST00000638599 341 ntBASIC0.72□□□□□ -2.29
TM2D3Q9BRN9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 Y_RNA.36-201ENST00000362602 112 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 RNU1-124P-201ENST00000363861 145 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 SNORD115-30-201ENST00000364117 82 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 RNU6-424P-201ENST00000384367 105 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 SNORD116-13-201ENST00000384408 92 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 MIR559-201ENST00000385188 96 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 MIR660-201ENST00000385235 97 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 SNORD41-201ENST00000386967 70 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 SNORA69.1-201ENST00000390904 137 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 MTCO3P19-201ENST00000415864 321 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 MTND4P28-201ENST00000426217 387 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 RPS29P28-201ENST00000446439 141 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 HSPE1P13-201ENST00000451143 297 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 AC074133.1-201ENST00000515696 183 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 RNU6-470P-201ENST00000515954 104 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 AC005730.3-201ENST00000583067 366 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 AC005828.6-201ENST00000606610 232 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 MIR6779-201ENST00000617283 64 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 AC006435.5-201ENST00000624486 112 ntBASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
TM2D3Q9BRN9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 MIRLET7C-201ENST00000362160 84 ntBASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 MIR410-201ENST00000362222 80 ntBASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 RNU4-76P-201ENST00000364509 141 ntBASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 Y_RNA.314-201ENST00000365114 102 ntBASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 RNU6-950P-201ENST00000384651 107 ntBASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 Y_RNA.577-201ENST00000384794 101 ntBASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 MIR873-201ENST00000401120 77 ntBASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 MTCYBP4-201ENST00000401524 249 ntBASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 RNA5SP511-201ENST00000410487 115 ntBASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 RNA5SP475-201ENST00000410568 110 ntBASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 UBE2V1P7-201ENST00000446395 340 ntBASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 Y_RNA.653-201ENST00000459091 95 ntBASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 RPL39P28-201ENST00000465655 155 ntBASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 RPL39P38-201ENST00000467018 153 ntBASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 RNU6-307P-201ENST00000516743 106 ntBASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 RNU2-56P-201ENST00000516826 190 ntBASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 RNU6-1096P-201ENST00000517089 102 ntBASIC0.7□□□□□ -2.3
TM2D3Q9BRN9 RNU2-12P-201ENST00000517216 168 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms