Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AL138960.2-201ENST00000625145 535 ntBASIC-0.72□□□□□ -2.52
VPS25Q9BRG1 MIR4788-201ENST00000639104 80 ntBASIC-0.72□□□□□ -2.52
VPS25Q9BRG1 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 RNY4P34-201ENST00000364779 95 ntBASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 RNU6-652P-201ENST00000365488 107 ntBASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 RNU6-46P-201ENST00000383860 107 ntBASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 RNU6-1257P-201ENST00000384625 110 ntBASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 Z99497.1-201ENST00000421282 135 ntBASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 MTND4LP11-201ENST00000422184 280 ntBASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 NDUFA5P4-201ENST00000436704 385 ntBASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 AC046134.1-201ENST00000514454 666 ntBASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 RNU6-897P-201ENST00000517135 105 ntBASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 RNU7-181P-201ENST00000517234 74 ntBASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 AC087683.2-201ENST00000611384 326 ntBASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 MIR2909-201ENST00000617113 69 ntBASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 MIR6514-201ENST00000622549 70 ntBASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 AC068137.4-201ENST00000638485 296 ntBASIC-0.73□□□□□ -2.53
VPS25Q9BRG1 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.74□□□□□ -2.53
VPS25Q9BRG1 SNORD50.1-201ENST00000362987 71 ntBASIC-0.74□□□□□ -2.53
VPS25Q9BRG1 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.74□□□□□ -2.53
VPS25Q9BRG1 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.74□□□□□ -2.53
VPS25Q9BRG1 SNORD49B-201ENST00000365172 72 ntBASIC-0.74□□□□□ -2.53
VPS25Q9BRG1 AC073464.1-201ENST00000429823 534 ntBASIC-0.74□□□□□ -2.53
VPS25Q9BRG1 MTCO1P5-201ENST00000433573 344 ntBASIC-0.74□□□□□ -2.53
VPS25Q9BRG1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.74□□□□□ -2.53
VPS25Q9BRG1 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.74□□□□□ -2.53
VPS25Q9BRG1 AC093303.1-201ENST00000514549 295 ntBASIC-0.74□□□□□ -2.53
VPS25Q9BRG1 RNA5SP330-201ENST00000517096 96 ntBASIC-0.74□□□□□ -2.53
VPS25Q9BRG1 RNU2-60P-201ENST00000517290 128 ntBASIC-0.74□□□□□ -2.53
VPS25Q9BRG1 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.75□□□□□ -2.53
VPS25Q9BRG1 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.75□□□□□ -2.53
VPS25Q9BRG1 RNU6-480P-201ENST00000384332 107 ntBASIC-0.75□□□□□ -2.53
VPS25Q9BRG1 RNU6-636P-201ENST00000384598 107 ntBASIC-0.75□□□□□ -2.53
VPS25Q9BRG1 MCFD2P1-201ENST00000417812 300 ntBASIC-0.75□□□□□ -2.53
VPS25Q9BRG1 AC133104.1-201ENST00000429100 218 ntBASIC-0.75□□□□□ -2.53
VPS25Q9BRG1 MTND1P17-201ENST00000448961 204 ntBASIC-0.75□□□□□ -2.53
VPS25Q9BRG1 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.75□□□□□ -2.53
VPS25Q9BRG1 CCDC34P1-201ENST00000507441 517 ntBASIC-0.75□□□□□ -2.53
VPS25Q9BRG1 AC010486.3-201ENST00000511602 785 ntBASIC-0.75□□□□□ -2.53
VPS25Q9BRG1 RNA5SP47-201ENST00000517230 109 ntBASIC-0.75□□□□□ -2.53
VPS25Q9BRG1 AL137161.1-201ENST00000532231 390 ntBASIC-0.75□□□□□ -2.53
VPS25Q9BRG1 MIR3925-201ENST00000584674 77 ntBASIC-0.75□□□□□ -2.53
VPS25Q9BRG1 AP000811.1-201ENST00000603803 651 ntBASIC-0.75□□□□□ -2.53
VPS25Q9BRG1 AC072046.2-201ENST00000618366 268 ntBASIC-0.75□□□□□ -2.53
VPS25Q9BRG1 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.75□□□□□ -2.53
VPS25Q9BRG1 AC006504.8-201ENST00000621046 635 ntBASIC-0.75□□□□□ -2.53
VPS25Q9BRG1 AC091304.10-201ENST00000641554 121 ntBASIC-0.75□□□□□ -2.53
VPS25Q9BRG1 SNORD114-11-201ENST00000363738 75 ntBASIC-0.76□□□□□ -2.53
VPS25Q9BRG1 RNU6-923P-201ENST00000364753 107 ntBASIC-0.76□□□□□ -2.53
VPS25Q9BRG1 MIR518F-201ENST00000384973 87 ntBASIC-0.76□□□□□ -2.53
VPS25Q9BRG1 RNU6-159P-201ENST00000391080 106 ntBASIC-0.76□□□□□ -2.53
VPS25Q9BRG1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.76□□□□□ -2.53
VPS25Q9BRG1 RNU6-855P-201ENST00000410395 104 ntBASIC-0.76□□□□□ -2.53
VPS25Q9BRG1 RNA5SP127-201ENST00000411051 133 ntBASIC-0.76□□□□□ -2.53
VPS25Q9BRG1 RNU6-284P-201ENST00000411105 106 ntBASIC-0.76□□□□□ -2.53
VPS25Q9BRG1 AC026782.1-201ENST00000512952 449 ntBASIC-0.76□□□□□ -2.53
VPS25Q9BRG1 AC069431.2-201ENST00000604149 1099 ntBASIC-0.76□□□□□ -2.53
VPS25Q9BRG1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.76□□□□□ -2.53
VPS25Q9BRG1 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.76□□□□□ -2.53
VPS25Q9BRG1 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 U8.17-201ENST00000391292 132 ntBASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 MIR873-201ENST00000401120 77 ntBASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 MTCYBP4-201ENST00000401524 249 ntBASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 MIR1287-201ENST00000408492 90 ntBASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 RNU2-72P-201ENST00000411175 163 ntBASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 POLR2KP2-201ENST00000438155 177 ntBASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 HMGN2P32-201ENST00000444648 269 ntBASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 RPS29P8-201ENST00000445109 171 ntBASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 MIR18B-201ENST00000454574 71 ntBASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 AC114755.3-201ENST00000481111 251 ntBASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 SNORA31.14-201ENST00000516728 116 ntBASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 TUSC7.1-201ENST00000610969 165 ntBASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 U6.115-201ENST00000636045 103 ntBASIC-0.77□□□□□ -2.53
VPS25Q9BRG1 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.78□□□□□ -2.53
VPS25Q9BRG1 RNU6-108P-201ENST00000365558 107 ntBASIC-0.78□□□□□ -2.53
VPS25Q9BRG1 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.78□□□□□ -2.53
VPS25Q9BRG1 RNU6-541P-201ENST00000384709 110 ntBASIC-0.78□□□□□ -2.53
VPS25Q9BRG1 MIR518E-201ENST00000385252 88 ntBASIC-0.78□□□□□ -2.53
VPS25Q9BRG1 RNU6-903P-201ENST00000391270 109 ntBASIC-0.78□□□□□ -2.53
VPS25Q9BRG1 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.78□□□□□ -2.53
VPS25Q9BRG1 AL008987.1-201ENST00000415528 237 ntBASIC-0.78□□□□□ -2.53
VPS25Q9BRG1 RPL30P10-201ENST00000488148 337 ntBASIC-0.78□□□□□ -2.53
VPS25Q9BRG1 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.78□□□□□ -2.53
VPS25Q9BRG1 CPDP1-201ENST00000579660 283 ntBASIC-0.78□□□□□ -2.53
VPS25Q9BRG1 MIR3941-201ENST00000582572 103 ntBASIC-0.78□□□□□ -2.53
VPS25Q9BRG1 AC121247.2-201ENST00000604776 136 ntBASIC-0.78□□□□□ -2.53
VPS25Q9BRG1 SNORA70.25-201ENST00000612741 95 ntBASIC-0.78□□□□□ -2.53
VPS25Q9BRG1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.78□□□□□ -2.53
VPS25Q9BRG1 MIR8066-201ENST00000617280 78 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms