Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 RNU6-661P-201ENST00000362409 107 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.144-201ENST00000363521 113 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 SNORD115-30-201ENST00000364117 82 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 SNORA63.7-201ENST00000365579 123 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.418-201ENST00000384029 102 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.526-201ENST00000384572 110 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 RNA5SP467-201ENST00000391274 118 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 CST2P1-201ENST00000425770 87 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 HSPE1P9-201ENST00000440046 311 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 MRPS10P1-201ENST00000448483 130 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 SNORD65B-201ENST00000459126 73 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 RNU6-436P-201ENST00000516171 114 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 RNU6-155P-201ENST00000516347 100 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 SNORA40.15-201ENST00000516884 107 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 RNU7-110P-201ENST00000516891 62 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 SCARNA24.2-201ENST00000516968 130 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.713-201ENST00000517013 96 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 AC090821.2-201ENST00000523552 176 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.29□□□□□ -2.2
EBF4Q9BQW3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
EBF4Q9BQW3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.29□□□□□ -2.2
EBF4Q9BQW3 DEFB117-201ENST00000602356 141 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.29□□□□□ -2.2
EBF4Q9BQW3 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 MIR8062-201ENST00000621515 85 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 MIR7843-201ENST00000622274 79 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 U6.115-201ENST00000636045 103 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
EBF4Q9BQW3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.176-201ENST00000363815 109 ntBASIC1.28□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.276-201ENST00000364732 109 ntBASIC1.28□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.329-201ENST00000365209 107 ntBASIC1.28□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.331-201ENST00000365267 102 ntBASIC1.28□□□□□ -2.2
EBF4Q9BQW3 SNORA4.2-201ENST00000365313 147 ntBASIC1.28□□□□□ -2.2
EBF4Q9BQW3 RNU6-1264P-201ENST00000383891 107 ntBASIC1.28□□□□□ -2.2
EBF4Q9BQW3 RNU6-203P-201ENST00000384038 104 ntBASIC1.28□□□□□ -2.2
EBF4Q9BQW3 SNORA20B-201ENST00000384220 132 ntBASIC1.28□□□□□ -2.2
EBF4Q9BQW3 MIR520A-201ENST00000384862 85 ntBASIC1.28□□□□□ -2.2
EBF4Q9BQW3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
EBF4Q9BQW3 RNA5SP475-201ENST00000410568 110 ntBASIC1.28□□□□□ -2.2
EBF4Q9BQW3 RNU6-1203P-201ENST00000410703 110 ntBASIC1.28□□□□□ -2.2
EBF4Q9BQW3 RNU2-38P-201ENST00000410856 79 ntBASIC1.28□□□□□ -2.2
EBF4Q9BQW3 RNU6-651P-201ENST00000411040 105 ntBASIC1.28□□□□□ -2.2
EBF4Q9BQW3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.28□□□□□ -2.2
EBF4Q9BQW3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.28□□□□□ -2.2
EBF4Q9BQW3 DEFB108E-201ENST00000524692 240 ntBASIC1.28□□□□□ -2.2
EBF4Q9BQW3 RPL21P9-201ENST00000556149 474 ntBASIC1.28□□□□□ -2.2
EBF4Q9BQW3 MIR3198-2-201ENST00000577868 80 ntBASIC1.28□□□□□ -2.2
EBF4Q9BQW3 PRR13P7-201ENST00000605538 430 ntBASIC1.28□□□□□ -2.2
EBF4Q9BQW3 AC095038.3-201ENST00000634439 195 ntBASIC1.28□□□□□ -2.2
EBF4Q9BQW3 U6.108-201ENST00000637764 58 ntBASIC1.28□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.237-201ENST00000364439 102 ntBASIC1.27□□□□□ -2.21
EBF4Q9BQW3 Y_RNA.243-201ENST00000364481 109 ntBASIC1.27□□□□□ -2.21
EBF4Q9BQW3 RNA5SP190-201ENST00000365222 118 ntBASIC1.27□□□□□ -2.21
EBF4Q9BQW3 SNORD63-201ENST00000384262 68 ntBASIC1.27□□□□□ -2.21
EBF4Q9BQW3 Y_RNA.461-201ENST00000384263 103 ntBASIC1.27□□□□□ -2.21
EBF4Q9BQW3 RNU6-463P-201ENST00000384340 107 ntBASIC1.27□□□□□ -2.21
EBF4Q9BQW3 MIR150-201ENST00000385048 84 ntBASIC1.27□□□□□ -2.21
EBF4Q9BQW3 Y_RNA.581-201ENST00000391017 97 ntBASIC1.27□□□□□ -2.21
EBF4Q9BQW3 RNU2-54P-201ENST00000410299 190 ntBASIC1.27□□□□□ -2.21
EBF4Q9BQW3 AL121890.1-201ENST00000435457 205 ntBASIC1.27□□□□□ -2.21
EBF4Q9BQW3 AC015922.2-201ENST00000435593 184 ntBASIC1.27□□□□□ -2.21
EBF4Q9BQW3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.27□□□□□ -2.21
EBF4Q9BQW3 AL606517.2-201ENST00000442855 241 ntBASIC1.27□□□□□ -2.21
EBF4Q9BQW3 AC074290.1-201ENST00000448883 135 ntBASIC1.27□□□□□ -2.21
EBF4Q9BQW3 NDUFB4P10-201ENST00000452541 359 ntBASIC1.27□□□□□ -2.21
EBF4Q9BQW3 SNORD13-201ENST00000459299 104 ntBASIC1.27□□□□□ -2.21
EBF4Q9BQW3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.27□□□□□ -2.21
EBF4Q9BQW3 RNU6-63P-201ENST00000516690 95 ntBASIC1.27□□□□□ -2.21
EBF4Q9BQW3 AC023157.2-201ENST00000540596 141 ntBASIC1.27□□□□□ -2.21
EBF4Q9BQW3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.27□□□□□ -2.21
EBF4Q9BQW3 AC011373.1-201ENST00000607270 237 ntBASIC1.27□□□□□ -2.21
EBF4Q9BQW3 RNU4-80P-201ENST00000363200 141 ntBASIC1.26□□□□□ -2.21
EBF4Q9BQW3 Y_RNA.149-201ENST00000363558 117 ntBASIC1.26□□□□□ -2.21
EBF4Q9BQW3 SNORA72.2-201ENST00000365028 127 ntBASIC1.26□□□□□ -2.21
EBF4Q9BQW3 RNU6-338P-201ENST00000383888 105 ntBASIC1.26□□□□□ -2.21
EBF4Q9BQW3 Y_RNA.462-201ENST00000384268 102 ntBASIC1.26□□□□□ -2.21
EBF4Q9BQW3 RNU6-196P-201ENST00000384315 107 ntBASIC1.26□□□□□ -2.21
EBF4Q9BQW3 MIR30A-201ENST00000385092 71 ntBASIC1.26□□□□□ -2.21
EBF4Q9BQW3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
EBF4Q9BQW3 AL031003.1-201ENST00000404229 172 ntBASIC1.26□□□□□ -2.21
EBF4Q9BQW3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.26□□□□□ -2.21
EBF4Q9BQW3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.26□□□□□ -2.21
EBF4Q9BQW3 RNU1-123P-201ENST00000458950 160 ntBASIC1.26□□□□□ -2.21
EBF4Q9BQW3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.26□□□□□ -2.21
EBF4Q9BQW3 CYCSP23-201ENST00000519781 313 ntBASIC1.26□□□□□ -2.21
EBF4Q9BQW3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.26□□□□□ -2.21
EBF4Q9BQW3 MIR4643-201ENST00000577473 78 ntBASIC1.26□□□□□ -2.21
EBF4Q9BQW3 SNORA77B-201ENST00000578179 125 ntBASIC1.26□□□□□ -2.21
EBF4Q9BQW3 AC012433.1-201ENST00000588916 398 ntBASIC1.26□□□□□ -2.21
EBF4Q9BQW3 MIR8074-201ENST00000615081 81 ntBASIC1.26□□□□□ -2.21
EBF4Q9BQW3 MIR6715A-201ENST00000615929 79 ntBASIC1.26□□□□□ -2.21
EBF4Q9BQW3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.26□□□□□ -2.21
EBF4Q9BQW3 7SK.10-201ENST00000621414 298 ntBASIC1.26□□□□□ -2.21
EBF4Q9BQW3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.26□□□□□ -2.21
EBF4Q9BQW3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.26□□□□□ -2.21
EBF4Q9BQW3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.26□□□□□ -2.21
EBF4Q9BQW3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
EBF4Q9BQW3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms