Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC107393.1-201ENST00000512403 346 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 AC011406.1-201ENST00000512440 370 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 RNA5SP200-201ENST00000516360 103 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 RNU6-63P-201ENST00000516690 95 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 AC100767.1-201ENST00000528178 123 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 MIR5692C2-201ENST00000577959 77 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 MIR3169-201ENST00000578032 83 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 AC098479.1-201ENST00000609225 154 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 AL353149.1-201ENST00000610667 244 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.61□□□□□ -2.15
VGLL1Q99990 U6.73-201ENST00000619194 103 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 MIR338-201ENST00000636369 67 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
VGLL1Q99990 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.6□□□□□ -2.15
VGLL1Q99990 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
VGLL1Q99990 RNA5SP289-201ENST00000362332 137 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 snoU2-30.2-201ENST00000362805 70 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 Y_RNA.111-201ENST00000363248 100 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 SNORA33-201ENST00000363664 130 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 RNU6-682P-201ENST00000363843 106 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 RNA5SP493-201ENST00000364115 91 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 U8.7-201ENST00000364940 136 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 RNU6-407P-201ENST00000365280 104 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 SNORA48.3-201ENST00000391081 134 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.6□□□□□ -2.15
VGLL1Q99990 AL138752.1-201ENST00000452964 351 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 RNU7-120P-201ENST00000459334 63 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 AC025033.1-201ENST00000463883 194 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.6□□□□□ -2.15
VGLL1Q99990 AC097462.1-201ENST00000514125 324 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 AC022559.1-201ENST00000520905 205 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 AC024405.2-202ENST00000532731 184 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.6□□□□□ -2.15
VGLL1Q99990 AC015720.1-201ENST00000565251 277 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 MIR4672-201ENST00000583126 81 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 Z83818.1-201ENST00000603584 150 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 SNORD14A-201ENST00000606526 91 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 MIR6873-201ENST00000622788 63 ntBASIC1.6□□□□□ -2.15
VGLL1Q99990 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
VGLL1Q99990 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
VGLL1Q99990 RNU4-10P-201ENST00000364383 140 ntBASIC1.59□□□□□ -2.15
VGLL1Q99990 RNU6-923P-201ENST00000364753 107 ntBASIC1.59□□□□□ -2.15
VGLL1Q99990 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.59□□□□□ -2.15
VGLL1Q99990 RNU6-1323P-201ENST00000384025 107 ntBASIC1.59□□□□□ -2.15
VGLL1Q99990 MTCO2P33-201ENST00000402100 465 ntBASIC1.59□□□□□ -2.15
VGLL1Q99990 RNA5SP511-201ENST00000410487 115 ntBASIC1.59□□□□□ -2.15
VGLL1Q99990 PIGPP3-201ENST00000425307 415 ntBASIC1.59□□□□□ -2.15
VGLL1Q99990 AL162725.1-201ENST00000435405 301 ntBASIC1.59□□□□□ -2.15
VGLL1Q99990 AC099677.2-201ENST00000436385 175 ntBASIC1.59□□□□□ -2.15
VGLL1Q99990 RN7SL274P-201ENST00000492268 272 ntBASIC1.59□□□□□ -2.15
VGLL1Q99990 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.59□□□□□ -2.15
VGLL1Q99990 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.59□□□□□ -2.15
VGLL1Q99990 RNU6-1041P-201ENST00000516254 102 ntBASIC1.59□□□□□ -2.15
VGLL1Q99990 RNU7-115P-201ENST00000516433 55 ntBASIC1.59□□□□□ -2.15
VGLL1Q99990 RNU6-182P-201ENST00000516970 105 ntBASIC1.59□□□□□ -2.15
VGLL1Q99990 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.59□□□□□ -2.15
VGLL1Q99990 MIR4438-201ENST00000585271 93 ntBASIC1.59□□□□□ -2.15
VGLL1Q99990 AC012493.3-201ENST00000604494 112 ntBASIC1.59□□□□□ -2.15
VGLL1Q99990 AP003357.1-201ENST00000604497 148 ntBASIC1.59□□□□□ -2.15
VGLL1Q99990 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.58□□□□□ -2.16
VGLL1Q99990 RNU6-899P-201ENST00000363947 107 ntBASIC1.58□□□□□ -2.16
VGLL1Q99990 SNORA3A-201ENST00000364113 130 ntBASIC1.58□□□□□ -2.16
VGLL1Q99990 Y_RNA.262-201ENST00000364641 102 ntBASIC1.58□□□□□ -2.16
VGLL1Q99990 Y_RNA.308-201ENST00000365043 101 ntBASIC1.58□□□□□ -2.16
VGLL1Q99990 Y_RNA.435-201ENST00000384095 112 ntBASIC1.58□□□□□ -2.16
VGLL1Q99990 Y_RNA.500-201ENST00000384466 111 ntBASIC1.58□□□□□ -2.16
VGLL1Q99990 RNU6-160P-201ENST00000384591 107 ntBASIC1.58□□□□□ -2.16
VGLL1Q99990 Y_RNA.555-201ENST00000384673 110 ntBASIC1.58□□□□□ -2.16
VGLL1Q99990 RNU6-417P-201ENST00000384712 107 ntBASIC1.58□□□□□ -2.16
VGLL1Q99990 Y_RNA.572-201ENST00000384757 98 ntBASIC1.58□□□□□ -2.16
VGLL1Q99990 RNU6-493P-201ENST00000391321 108 ntBASIC1.58□□□□□ -2.16
VGLL1Q99990 MIR1283-2-201ENST00000408621 87 ntBASIC1.58□□□□□ -2.16
VGLL1Q99990 AL135786.1-201ENST00000415892 214 ntBASIC1.58□□□□□ -2.16
VGLL1Q99990 EBAG9P1-201ENST00000418955 543 ntBASIC1.58□□□□□ -2.16
VGLL1Q99990 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.58□□□□□ -2.16
VGLL1Q99990 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.58□□□□□ -2.16
VGLL1Q99990 RPS27P22-201ENST00000478056 241 ntBASIC1.58□□□□□ -2.16
VGLL1Q99990 SCARNA16.3-201ENST00000516595 184 ntBASIC1.58□□□□□ -2.16
VGLL1Q99990 RNA5SP137-201ENST00000516833 135 ntBASIC1.58□□□□□ -2.16
VGLL1Q99990 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.58□□□□□ -2.16
VGLL1Q99990 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.58□□□□□ -2.16
VGLL1Q99990 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
VGLL1Q99990 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
VGLL1Q99990 Y_RNA.150-201ENST00000363562 102 ntBASIC1.57□□□□□ -2.16
VGLL1Q99990 snoU2_19.4-201ENST00000364329 80 ntBASIC1.57□□□□□ -2.16
VGLL1Q99990 RNU6-886P-201ENST00000384319 105 ntBASIC1.57□□□□□ -2.16
VGLL1Q99990 MIR626-201ENST00000385032 94 ntBASIC1.57□□□□□ -2.16
VGLL1Q99990 RNA5SP467-201ENST00000391274 118 ntBASIC1.57□□□□□ -2.16
VGLL1Q99990 SUMO2P12-201ENST00000405924 140 ntBASIC1.57□□□□□ -2.16
VGLL1Q99990 MIR1278-201ENST00000408753 81 ntBASIC1.57□□□□□ -2.16
VGLL1Q99990 RNU4-53P-201ENST00000410828 140 ntBASIC1.57□□□□□ -2.16
VGLL1Q99990 Y_RNA.793-201ENST00000411222 111 ntBASIC1.57□□□□□ -2.16
VGLL1Q99990 COX6CP10-201ENST00000416832 224 ntBASIC1.57□□□□□ -2.16
VGLL1Q99990 BX510359.4-201ENST00000423750 193 ntBASIC1.57□□□□□ -2.16
VGLL1Q99990 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.57□□□□□ -2.16
VGLL1Q99990 AC010409.1-201ENST00000487382 476 ntBASIC1.57□□□□□ -2.16
VGLL1Q99990 AC117454.1-201ENST00000491120 168 ntBASIC1.57□□□□□ -2.16
VGLL1Q99990 AP005660.1-201ENST00000522972 293 ntBASIC1.57□□□□□ -2.16
VGLL1Q99990 AP002392.1-201ENST00000537692 208 ntBASIC1.57□□□□□ -2.16
VGLL1Q99990 AL137100.2-201ENST00000555786 315 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms