Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 AC127459.3-201ENST00000624328 466 ntBASIC0.13□□□□□ -2.39
SCAF11Q99590 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
SCAF11Q99590 SNORA9.1-201ENST00000362412 131 ntBASIC0.12□□□□□ -2.39
SCAF11Q99590 SNORA27.1-201ENST00000362604 124 ntBASIC0.12□□□□□ -2.39
SCAF11Q99590 RNU6-1327P-201ENST00000365302 105 ntBASIC0.12□□□□□ -2.39
SCAF11Q99590 RNY1P8-201ENST00000383970 114 ntBASIC0.12□□□□□ -2.39
SCAF11Q99590 RNU6-136P-201ENST00000384663 107 ntBASIC0.12□□□□□ -2.39
SCAF11Q99590 MIR520G-201ENST00000385064 90 ntBASIC0.12□□□□□ -2.39
SCAF11Q99590 MIR136-201ENST00000385207 82 ntBASIC0.12□□□□□ -2.39
SCAF11Q99590 RNU6-177P-201ENST00000411257 104 ntBASIC0.12□□□□□ -2.39
SCAF11Q99590 AC018865.2-201ENST00000423631 129 ntBASIC0.12□□□□□ -2.39
SCAF11Q99590 MTND3P16-201ENST00000452205 344 ntBASIC0.12□□□□□ -2.39
SCAF11Q99590 RNU6-1208P-201ENST00000459588 107 ntBASIC0.12□□□□□ -2.39
SCAF11Q99590 AC018710.1-201ENST00000506509 158 ntBASIC0.12□□□□□ -2.39
SCAF11Q99590 RN7SKP164-201ENST00000516138 266 ntBASIC0.12□□□□□ -2.39
SCAF11Q99590 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.12□□□□□ -2.39
SCAF11Q99590 MIR4764-201ENST00000580680 88 ntBASIC0.12□□□□□ -2.39
SCAF11Q99590 AL050303.3-201ENST00000613704 284 ntBASIC0.12□□□□□ -2.39
SCAF11Q99590 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
SCAF11Q99590 SNORD68-201ENST00000363214 84 ntBASIC0.11□□□□□ -2.39
SCAF11Q99590 CALM2P3-201ENST00000400429 449 ntBASIC0.11□□□□□ -2.39
SCAF11Q99590 MIR1468-201ENST00000410600 86 ntBASIC0.11□□□□□ -2.39
SCAF11Q99590 AL445567.1-201ENST00000439121 144 ntBASIC0.11□□□□□ -2.39
SCAF11Q99590 AL137792.2-201ENST00000443484 235 ntBASIC0.11□□□□□ -2.39
SCAF11Q99590 RPS3AP17-201ENST00000472594 777 ntBASIC0.11□□□□□ -2.39
SCAF11Q99590 AC108740.1-201ENST00000498629 225 ntBASIC0.11□□□□□ -2.39
SCAF11Q99590 SNORA40.12-201ENST00000516329 111 ntBASIC0.11□□□□□ -2.39
SCAF11Q99590 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.11□□□□□ -2.39
SCAF11Q99590 RNU6-349P-201ENST00000362402 107 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 RN7SKP142-201ENST00000411236 328 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 RNU6-1304P-201ENST00000411374 106 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 AC243428.1-201ENST00000421099 264 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 MTCO1P20-201ENST00000425366 358 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.1□□□□□ -2.39
SCAF11Q99590 PCNPP5-201ENST00000452246 481 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 RNU6-261P-201ENST00000459506 102 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.1□□□□□ -2.39
SCAF11Q99590 AC074133.1-201ENST00000515696 183 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 Y_RNA.683-201ENST00000516508 93 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 AC023442.1-201ENST00000531247 422 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.1□□□□□ -2.39
SCAF11Q99590 AL603755.1-201ENST00000619504 163 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 Y_RNA.1-201ENST00000352915 104 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 SNORD14.1-201ENST00000365609 90 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 RNU6-281P-201ENST00000384212 103 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 SNORA2B-201ENST00000384583 137 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 MIR516B2-201ENST00000385190 85 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 AL392103.1-201ENST00000447000 198 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.1□□□□□ -2.39
SCAF11Q99590 RNU7-175P-201ENST00000515915 61 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 SNORA18.7-201ENST00000516910 131 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.1□□□□□ -2.39
SCAF11Q99590 AC134698.4-201ENST00000523451 826 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 AC099654.12-201ENST00000639868 649 ntBASIC0.1□□□□□ -2.39
SCAF11Q99590 MIR411-201ENST00000362239 96 ntBASIC0.09□□□□□ -2.4
SCAF11Q99590 RNU6-254P-201ENST00000363377 107 ntBASIC0.09□□□□□ -2.4
SCAF11Q99590 RNU4-20P-201ENST00000365601 151 ntBASIC0.09□□□□□ -2.4
SCAF11Q99590 RNU6-128P-201ENST00000383976 107 ntBASIC0.09□□□□□ -2.4
SCAF11Q99590 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.09□□□□□ -2.4
SCAF11Q99590 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.09□□□□□ -2.4
SCAF11Q99590 RPS29P8-201ENST00000445109 171 ntBASIC0.09□□□□□ -2.4
SCAF11Q99590 AC083904.1-201ENST00000487828 231 ntBASIC0.09□□□□□ -2.4
SCAF11Q99590 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.09□□□□□ -2.4
SCAF11Q99590 ACA59.1-201ENST00000515966 143 ntBASIC0.09□□□□□ -2.4
SCAF11Q99590 RNU7-43P-201ENST00000516554 64 ntBASIC0.09□□□□□ -2.4
SCAF11Q99590 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.09□□□□□ -2.4
SCAF11Q99590 AC093027.1-201ENST00000546698 429 ntBASIC0.09□□□□□ -2.4
SCAF11Q99590 AL162730.1-201ENST00000605734 292 ntBASIC0.09□□□□□ -2.4
SCAF11Q99590 MIR371B-201ENST00000638082 66 ntBASIC0.09□□□□□ -2.4
SCAF11Q99590 RNA5SP48-201ENST00000363969 126 ntBASIC0.08□□□□□ -2.4
SCAF11Q99590 Y_RNA.296-201ENST00000364930 108 ntBASIC0.08□□□□□ -2.4
SCAF11Q99590 RNU6-117P-201ENST00000365415 107 ntBASIC0.08□□□□□ -2.4
SCAF11Q99590 AC117470.1-201ENST00000381974 330 ntBASIC0.08□□□□□ -2.4
SCAF11Q99590 SNORA69-201ENST00000383895 132 ntBASIC0.08□□□□□ -2.4
SCAF11Q99590 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
SCAF11Q99590 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.08□□□□□ -2.4
SCAF11Q99590 AC046134.1-201ENST00000514454 666 ntBASIC0.08□□□□□ -2.4
SCAF11Q99590 MIR5696-201ENST00000578474 85 ntBASIC0.08□□□□□ -2.4
SCAF11Q99590 AC015726.2-201ENST00000620112 122 ntBASIC0.08□□□□□ -2.4
SCAF11Q99590 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.08□□□□□ -2.4
SCAF11Q99590 MIR103A1-201ENST00000362165 78 ntBASIC0.07□□□□□ -2.4
SCAF11Q99590 RNU6-654P-201ENST00000364373 107 ntBASIC0.07□□□□□ -2.4
SCAF11Q99590 MTND1P11-201ENST00000456661 876 ntBASIC0.07□□□□□ -2.4
SCAF11Q99590 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.07□□□□□ -2.4
SCAF11Q99590 AC073648.5-201ENST00000603502 305 ntBASIC0.07□□□□□ -2.4
SCAF11Q99590 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.07□□□□□ -2.4
SCAF11Q99590 U6.115-201ENST00000636045 103 ntBASIC0.07□□□□□ -2.4
SCAF11Q99590 MIR18A-201ENST00000362310 71 ntBASIC0.06□□□□□ -2.4
SCAF11Q99590 RNU6-1084P-201ENST00000362498 107 ntBASIC0.06□□□□□ -2.4
SCAF11Q99590 SNORD44.1-201ENST00000363202 61 ntBASIC0.06□□□□□ -2.4
SCAF11Q99590 SNORA72.3-201ENST00000365074 132 ntBASIC0.06□□□□□ -2.4
SCAF11Q99590 MIR573-201ENST00000384964 99 ntBASIC0.06□□□□□ -2.4
SCAF11Q99590 MIR1302-7-201ENST00000408841 72 ntBASIC0.06□□□□□ -2.4
SCAF11Q99590 ELOCP21-201ENST00000412558 336 ntBASIC0.06□□□□□ -2.4
SCAF11Q99590 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.06□□□□□ -2.4
SCAF11Q99590 RN7SKP287-201ENST00000516546 266 ntBASIC0.06□□□□□ -2.4
SCAF11Q99590 AC093424.1-201ENST00000604999 338 ntBASIC0.06□□□□□ -2.4
SCAF11Q99590 AC019193.3-201ENST00000609144 554 ntBASIC0.06□□□□□ -2.4
SCAF11Q99590 RNU6-1322P-201ENST00000364309 107 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms