Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PNKPQ96T60 MIRLET7G-201ENST00000362280 84 ntBASIC2.43□□□□□ -2.02
PNKPQ96T60 Y_RNA.24-201ENST00000362508 103 ntBASIC2.43□□□□□ -2.02
PNKPQ96T60 SNORD56.5-201ENST00000364281 72 ntBASIC2.43□□□□□ -2.02
PNKPQ96T60 snoU2_19.4-201ENST00000364329 80 ntBASIC2.43□□□□□ -2.02
PNKPQ96T60 SNORD114-6-201ENST00000364393 72 ntBASIC2.43□□□□□ -2.02
PNKPQ96T60 RNU6-136P-201ENST00000384663 107 ntBASIC2.43□□□□□ -2.02
PNKPQ96T60 SNORA8.3-201ENST00000384679 139 ntBASIC2.43□□□□□ -2.02
PNKPQ96T60 MIR626-201ENST00000385032 94 ntBASIC2.43□□□□□ -2.02
PNKPQ96T60 RNU6-381P-201ENST00000391259 108 ntBASIC2.43□□□□□ -2.02
PNKPQ96T60 MIR548M-201ENST00000408260 86 ntBASIC2.43□□□□□ -2.02
PNKPQ96T60 RNA5SP511-201ENST00000410487 115 ntBASIC2.43□□□□□ -2.02
PNKPQ96T60 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.43□□□□□ -2.02
PNKPQ96T60 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.43□□□□□ -2.02
PNKPQ96T60 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.43□□□□□ -2.02
PNKPQ96T60 AL137100.2-201ENST00000555786 315 ntBASIC2.43□□□□□ -2.02
PNKPQ96T60 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.43□□□□□ -2.02
PNKPQ96T60 Y_RNA.802-201ENST00000614892 130 ntBASIC2.43□□□□□ -2.02
PNKPQ96T60 MIR548AY-201ENST00000617669 107 ntBASIC2.43□□□□□ -2.02
PNKPQ96T60 AC006435.5-201ENST00000624486 112 ntBASIC2.43□□□□□ -2.02
PNKPQ96T60 RNU6-117P-201ENST00000365415 107 ntBASIC2.42□□□□□ -2.02
PNKPQ96T60 RNU6-1072P-201ENST00000384703 107 ntBASIC2.42□□□□□ -2.02
PNKPQ96T60 RNU6-443P-201ENST00000384780 107 ntBASIC2.42□□□□□ -2.02
PNKPQ96T60 MIR1253-201ENST00000408273 105 ntBASIC2.42□□□□□ -2.02
PNKPQ96T60 MIR1262-201ENST00000408276 93 ntBASIC2.42□□□□□ -2.02
PNKPQ96T60 SUMO1P4-201ENST00000429430 302 ntBASIC2.42□□□□□ -2.02
PNKPQ96T60 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.42□□□□□ -2.02
PNKPQ96T60 NDUFA5P6-201ENST00000542110 379 ntBASIC2.42□□□□□ -2.02
PNKPQ96T60 MIR1273D-201ENST00000577266 86 ntBASIC2.42□□□□□ -2.02
PNKPQ96T60 MIR4438-201ENST00000585271 93 ntBASIC2.42□□□□□ -2.02
PNKPQ96T60 POLR3GP1-201ENST00000594073 261 ntBASIC2.42□□□□□ -2.02
PNKPQ96T60 AC005972.2-201ENST00000604690 348 ntBASIC2.42□□□□□ -2.02
PNKPQ96T60 CENPCP1-201ENST00000533085 2578 ntBASIC2.42□□□□□ -2.02
PNKPQ96T60 RNU1-22P-201ENST00000363334 158 ntBASIC2.41□□□□□ -2.02
PNKPQ96T60 Y_RNA.182-201ENST00000363880 111 ntBASIC2.41□□□□□ -2.02
PNKPQ96T60 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.41□□□□□ -2.02
PNKPQ96T60 RNU6-969P-201ENST00000383900 105 ntBASIC2.41□□□□□ -2.02
PNKPQ96T60 RNU6-417P-201ENST00000384712 107 ntBASIC2.41□□□□□ -2.02
PNKPQ96T60 SNORA36B-201ENST00000410438 131 ntBASIC2.41□□□□□ -2.02
PNKPQ96T60 RNU6-383P-201ENST00000410864 94 ntBASIC2.41□□□□□ -2.02
PNKPQ96T60 SRIP3-201ENST00000413200 219 ntBASIC2.41□□□□□ -2.02
PNKPQ96T60 RPS15AP28-201ENST00000435088 386 ntBASIC2.41□□□□□ -2.02
PNKPQ96T60 HMGN2P34-201ENST00000437647 269 ntBASIC2.41□□□□□ -2.02
PNKPQ96T60 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.41□□□□□ -2.02
PNKPQ96T60 RNU6-1212P-201ENST00000517023 104 ntBASIC2.41□□□□□ -2.02
PNKPQ96T60 IGKV3-31-201ENST00000523109 329 ntBASIC2.41□□□□□ -2.02
PNKPQ96T60 AC015720.1-201ENST00000565251 277 ntBASIC2.41□□□□□ -2.02
PNKPQ96T60 AP003357.1-201ENST00000604497 148 ntBASIC2.41□□□□□ -2.02
PNKPQ96T60 AC104465.1-201ENST00000611365 139 ntBASIC2.41□□□□□ -2.02
PNKPQ96T60 AC021753.1-201ENST00000635724 168 ntBASIC2.41□□□□□ -2.02
PNKPQ96T60 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
PNKPQ96T60 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PNKPQ96T60 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PNKPQ96T60 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
PNKPQ96T60 Y_RNA.412-201ENST00000384001 104 ntBASIC2.4□□□□□ -2.03
PNKPQ96T60 RNU6-1323P-201ENST00000384025 107 ntBASIC2.4□□□□□ -2.03
PNKPQ96T60 MIR144-201ENST00000384886 86 ntBASIC2.4□□□□□ -2.03
PNKPQ96T60 MIR504-201ENST00000385065 83 ntBASIC2.4□□□□□ -2.03
PNKPQ96T60 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PNKPQ96T60 RNU6-717P-201ENST00000459076 104 ntBASIC2.4□□□□□ -2.03
PNKPQ96T60 AC011406.1-201ENST00000512440 370 ntBASIC2.4□□□□□ -2.03
PNKPQ96T60 AC097462.1-201ENST00000514125 324 ntBASIC2.4□□□□□ -2.03
PNKPQ96T60 SCARNA8-201ENST00000515924 131 ntBASIC2.4□□□□□ -2.03
PNKPQ96T60 RNU6-1278P-201ENST00000516130 107 ntBASIC2.4□□□□□ -2.03
PNKPQ96T60 RNU6-1041P-201ENST00000516254 102 ntBASIC2.4□□□□□ -2.03
PNKPQ96T60 RNU6-453P-201ENST00000516819 85 ntBASIC2.4□□□□□ -2.03
PNKPQ96T60 AC121758.2-201ENST00000553271 193 ntBASIC2.4□□□□□ -2.03
PNKPQ96T60 U4atac.1-201ENST00000618345 95 ntBASIC2.4□□□□□ -2.03
PNKPQ96T60 MIR7843-201ENST00000622274 79 ntBASIC2.4□□□□□ -2.03
PNKPQ96T60 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PNKPQ96T60 Y_RNA.8-201ENST00000362353 102 ntBASIC2.39□□□□□ -2.03
PNKPQ96T60 RNA5SP432-201ENST00000362480 116 ntBASIC2.39□□□□□ -2.03
PNKPQ96T60 Y_RNA.99-201ENST00000363138 105 ntBASIC2.39□□□□□ -2.03
PNKPQ96T60 RNU6-144P-201ENST00000383951 107 ntBASIC2.39□□□□□ -2.03
PNKPQ96T60 RNU6-804P-201ENST00000384286 107 ntBASIC2.39□□□□□ -2.03
PNKPQ96T60 RNU6-1135P-201ENST00000411083 103 ntBASIC2.39□□□□□ -2.03
PNKPQ96T60 RNU5E-9P-201ENST00000411164 104 ntBASIC2.39□□□□□ -2.03
PNKPQ96T60 AL162725.1-201ENST00000435405 301 ntBASIC2.39□□□□□ -2.03
PNKPQ96T60 AC018634.1-201ENST00000437554 401 ntBASIC2.39□□□□□ -2.03
PNKPQ96T60 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.39□□□□□ -2.03
PNKPQ96T60 AC245047.8-201ENST00000456455 284 ntBASIC2.39□□□□□ -2.03
PNKPQ96T60 RNU7-26P-201ENST00000458980 63 ntBASIC2.39□□□□□ -2.03
PNKPQ96T60 AC091021.1-201ENST00000468051 388 ntBASIC2.39□□□□□ -2.03
PNKPQ96T60 RPL36AP21-201ENST00000490372 323 ntBASIC2.39□□□□□ -2.03
PNKPQ96T60 RNU7-172P-201ENST00000517125 64 ntBASIC2.39□□□□□ -2.03
PNKPQ96T60 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.39□□□□□ -2.03
PNKPQ96T60 AC022202.1-201ENST00000613515 211 ntBASIC2.39□□□□□ -2.03
PNKPQ96T60 U6.73-201ENST00000619194 103 ntBASIC2.39□□□□□ -2.03
PNKPQ96T60 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.39□□□□□ -2.03
PNKPQ96T60 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PNKPQ96T60 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
PNKPQ96T60 AC245060.5-201ENST00000610778 3293 ntBASIC2.38□□□□□ -2.03
PNKPQ96T60 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
PNKPQ96T60 Y_RNA.121-201ENST00000363309 113 ntBASIC2.38□□□□□ -2.03
PNKPQ96T60 RNU4-13P-201ENST00000364019 141 ntBASIC2.38□□□□□ -2.03
PNKPQ96T60 MT-TT-201ENST00000387460 66 ntBASIC2.38□□□□□ -2.03
PNKPQ96T60 MIR526A2-201ENST00000390198 65 ntBASIC2.38□□□□□ -2.03
PNKPQ96T60 RNU6-1186P-201ENST00000410429 97 ntBASIC2.38□□□□□ -2.03
PNKPQ96T60 RPL23AP54-201ENST00000495129 419 ntBASIC2.38□□□□□ -2.03
PNKPQ96T60 Y_RNA.797-201ENST00000515977 94 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 324.3 ms