Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 RNU6-107P-201ENST00000516643 102 ntBASIC1.43□□□□□ -2.18
ZIM3Q96PE6 SCARNA24.2-201ENST00000516968 130 ntBASIC1.43□□□□□ -2.18
ZIM3Q96PE6 RNU6-1271P-201ENST00000517049 105 ntBASIC1.43□□□□□ -2.18
ZIM3Q96PE6 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.43□□□□□ -2.18
ZIM3Q96PE6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.43□□□□□ -2.18
ZIM3Q96PE6 MIR3169-201ENST00000578032 83 ntBASIC1.43□□□□□ -2.18
ZIM3Q96PE6 AC025754.2-201ENST00000606491 432 ntBASIC1.43□□□□□ -2.18
ZIM3Q96PE6 AC078938.1-201ENST00000620993 318 ntBASIC1.43□□□□□ -2.18
ZIM3Q96PE6 RNU6-1266P-201ENST00000362794 105 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 U8.1-201ENST00000362843 134 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 Y_RNA.117-201ENST00000363294 101 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 RNU6-801P-201ENST00000364087 105 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 RNY1-201ENST00000364228 113 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 RNU6-740P-201ENST00000364734 105 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 Y_RNA.287-201ENST00000364853 94 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 RNU6-117P-201ENST00000365415 107 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 Y_RNA.416-201ENST00000384014 113 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 Y_RNA.569-201ENST00000384749 103 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 MIR758-201ENST00000390227 88 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
ZIM3Q96PE6 RNU6-57P-201ENST00000411348 103 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 AL121890.1-201ENST00000435457 205 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 SNORD2.1-201ENST00000458762 69 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 Y_RNA.637-201ENST00000459424 114 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 RNU6-295P-201ENST00000516901 104 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 RNU2-31P-201ENST00000516954 155 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 RNU6-388P-201ENST00000517012 105 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 RNU6-389P-201ENST00000517048 105 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.42□□□□□ -2.18
ZIM3Q96PE6 MIR4282-201ENST00000583613 67 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.42□□□□□ -2.18
ZIM3Q96PE6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.42□□□□□ -2.18
ZIM3Q96PE6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.42□□□□□ -2.18
ZIM3Q96PE6 SNORA27.1-201ENST00000362604 124 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 RNU4-13P-201ENST00000364019 141 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 Y_RNA.275-201ENST00000364726 110 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 Y_RNA.277-201ENST00000364754 102 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 Y_RNA.310-201ENST00000365063 113 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 Y_RNA.352-201ENST00000365439 102 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 RNU6-338P-201ENST00000383888 105 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 SNORD116-13-201ENST00000384408 92 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 RNU6-21P-201ENST00000384710 107 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 SNORA26.5-201ENST00000391215 123 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 AL357139.1-201ENST00000407792 426 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 RNA5SP475-201ENST00000410568 110 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 Y_RNA.618-201ENST00000410949 107 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 SRIP3-201ENST00000413200 219 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 AL390729.2-201ENST00000416137 156 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.41□□□□□ -2.18
ZIM3Q96PE6 AC099677.2-201ENST00000436385 175 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 SNRPGP13-201ENST00000442212 177 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.41□□□□□ -2.18
ZIM3Q96PE6 RPS29P29-201ENST00000456396 171 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 MIR4513-201ENST00000581077 86 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 MIR4753-201ENST00000585119 83 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 AC005357.1-201ENST00000588399 301 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 AL008718.3-201ENST00000610217 321 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.41□□□□□ -2.18
ZIM3Q96PE6 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.41□□□□□ -2.18
ZIM3Q96PE6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
ZIM3Q96PE6 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.18
ZIM3Q96PE6 MIR126-201ENST00000362291 85 ntBASIC1.4□□□□□ -2.19
ZIM3Q96PE6 Y_RNA.99-201ENST00000363138 105 ntBASIC1.4□□□□□ -2.19
ZIM3Q96PE6 Y_RNA.269-201ENST00000364685 89 ntBASIC1.4□□□□□ -2.19
ZIM3Q96PE6 RNU6-1318P-201ENST00000365389 103 ntBASIC1.4□□□□□ -2.19
ZIM3Q96PE6 RNU6-1310P-201ENST00000384153 107 ntBASIC1.4□□□□□ -2.19
ZIM3Q96PE6 RNU6-662P-201ENST00000384253 104 ntBASIC1.4□□□□□ -2.19
ZIM3Q96PE6 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
ZIM3Q96PE6 RPL23AP36-201ENST00000413895 458 ntBASIC1.4□□□□□ -2.19
ZIM3Q96PE6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
ZIM3Q96PE6 HMGN2P34-201ENST00000437647 269 ntBASIC1.4□□□□□ -2.19
ZIM3Q96PE6 SNORD116-28-201ENST00000516123 91 ntBASIC1.4□□□□□ -2.19
ZIM3Q96PE6 RNU6-948P-201ENST00000516374 107 ntBASIC1.4□□□□□ -2.19
ZIM3Q96PE6 SNORA31.24-201ENST00000517232 57 ntBASIC1.4□□□□□ -2.19
ZIM3Q96PE6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.4□□□□□ -2.19
ZIM3Q96PE6 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
ZIM3Q96PE6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.4□□□□□ -2.19
ZIM3Q96PE6 AC006001.4-201ENST00000622243 395 ntBASIC1.4□□□□□ -2.19
ZIM3Q96PE6 MIR7843-201ENST00000622274 79 ntBASIC1.4□□□□□ -2.19
ZIM3Q96PE6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.4□□□□□ -2.19
ZIM3Q96PE6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.4□□□□□ -2.19
ZIM3Q96PE6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.4□□□□□ -2.19
ZIM3Q96PE6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
ZIM3Q96PE6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.39□□□□□ -2.19
ZIM3Q96PE6 Y_RNA.44-201ENST00000362676 108 ntBASIC1.39□□□□□ -2.19
ZIM3Q96PE6 Y_RNA.82-201ENST00000363000 102 ntBASIC1.39□□□□□ -2.19
ZIM3Q96PE6 Y_RNA.92-201ENST00000363043 102 ntBASIC1.39□□□□□ -2.19
ZIM3Q96PE6 Y_RNA.122-201ENST00000363331 96 ntBASIC1.39□□□□□ -2.19
ZIM3Q96PE6 SNORD27-201ENST00000363981 72 ntBASIC1.39□□□□□ -2.19
ZIM3Q96PE6 RNU6-1048P-201ENST00000364054 107 ntBASIC1.39□□□□□ -2.19
ZIM3Q96PE6 RNA5SP493-201ENST00000364115 91 ntBASIC1.39□□□□□ -2.19
ZIM3Q96PE6 Y_RNA.235-201ENST00000364412 102 ntBASIC1.39□□□□□ -2.19
ZIM3Q96PE6 Y_RNA.306-201ENST00000365015 102 ntBASIC1.39□□□□□ -2.19
ZIM3Q96PE6 SNORA72.2-201ENST00000365028 127 ntBASIC1.39□□□□□ -2.19
ZIM3Q96PE6 Y_RNA.312-201ENST00000365089 102 ntBASIC1.39□□□□□ -2.19
ZIM3Q96PE6 Y_RNA.322-201ENST00000365151 102 ntBASIC1.39□□□□□ -2.19
ZIM3Q96PE6 HMGN2P3-201ENST00000433603 273 ntBASIC1.39□□□□□ -2.19
ZIM3Q96PE6 AC108059.2-201ENST00000434626 151 ntBASIC1.39□□□□□ -2.19
ZIM3Q96PE6 AC015922.2-201ENST00000435593 184 ntBASIC1.39□□□□□ -2.19
ZIM3Q96PE6 HMGN2P5-201ENST00000436882 273 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms