Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.63□□□□□ -2.15
LINC00479Q96M42 HSPE1P21-201ENST00000438283 308 ntBASIC1.63□□□□□ -2.15
LINC00479Q96M42 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.63□□□□□ -2.15
LINC00479Q96M42 RN7SL636P-201ENST00000497504 294 ntBASIC1.63□□□□□ -2.15
LINC00479Q96M42 SUMO2P18-201ENST00000518873 252 ntBASIC1.63□□□□□ -2.15
LINC00479Q96M42 uc_338.20-201ENST00000621563 178 ntBASIC1.63□□□□□ -2.15
LINC00479Q96M42 CTSLP2-204ENST00000629029 392 ntBASIC1.63□□□□□ -2.15
LINC00479Q96M42 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LINC00479Q96M42 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
LINC00479Q96M42 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
LINC00479Q96M42 SNORD114-7-201ENST00000362520 77 ntBASIC1.62□□□□□ -2.15
LINC00479Q96M42 MIR1253-201ENST00000408273 105 ntBASIC1.62□□□□□ -2.15
LINC00479Q96M42 MIR548I3-201ENST00000408378 149 ntBASIC1.62□□□□□ -2.15
LINC00479Q96M42 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.62□□□□□ -2.15
LINC00479Q96M42 MIR1278-201ENST00000408753 81 ntBASIC1.62□□□□□ -2.15
LINC00479Q96M42 MIR548I1-201ENST00000408810 149 ntBASIC1.62□□□□□ -2.15
LINC00479Q96M42 EBAG9P1-201ENST00000418955 543 ntBASIC1.62□□□□□ -2.15
LINC00479Q96M42 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.62□□□□□ -2.15
LINC00479Q96M42 HSPE1P13-201ENST00000451143 297 ntBASIC1.62□□□□□ -2.15
LINC00479Q96M42 AC074198.2-201ENST00000508153 258 ntBASIC1.62□□□□□ -2.15
LINC00479Q96M42 SNORA70.12-201ENST00000516084 153 ntBASIC1.62□□□□□ -2.15
LINC00479Q96M42 RNU7-115P-201ENST00000516433 55 ntBASIC1.62□□□□□ -2.15
LINC00479Q96M42 RNA5SP364-201ENST00000516938 78 ntBASIC1.62□□□□□ -2.15
LINC00479Q96M42 RNU7-172P-201ENST00000517125 64 ntBASIC1.62□□□□□ -2.15
LINC00479Q96M42 MIR3684-201ENST00000579779 74 ntBASIC1.62□□□□□ -2.15
LINC00479Q96M42 MIR4435-1-201ENST00000582552 80 ntBASIC1.62□□□□□ -2.15
LINC00479Q96M42 AL031274.2-201ENST00000599419 203 ntBASIC1.62□□□□□ -2.15
LINC00479Q96M42 SNORD14A-201ENST00000606526 91 ntBASIC1.62□□□□□ -2.15
LINC00479Q96M42 AL078604.3-201ENST00000615580 211 ntBASIC1.62□□□□□ -2.15
LINC00479Q96M42 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
LINC00479Q96M42 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LINC00479Q96M42 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
LINC00479Q96M42 Y_RNA.29-201ENST00000362570 113 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 snoU2-30.2-201ENST00000362805 70 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 RNU6-271P-201ENST00000363858 105 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 RNU1-96P-201ENST00000364163 162 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 snoU2_19.4-201ENST00000364329 80 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 Y_RNA.293-201ENST00000364908 93 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 RNU6-160P-201ENST00000384591 107 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 MIR597-201ENST00000384968 97 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 RNU6-383P-201ENST00000410864 94 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 Y_RNA.793-201ENST00000411222 111 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 COX6CP14-201ENST00000469580 174 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.61□□□□□ -2.15
LINC00479Q96M42 YWHAEP4-201ENST00000505390 198 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 AC097462.1-201ENST00000514125 324 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 SCARNA8-201ENST00000515924 131 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 RNU6-861P-201ENST00000516745 106 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 RNU6-453P-201ENST00000516819 85 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.61□□□□□ -2.15
LINC00479Q96M42 MIR4513-201ENST00000581077 86 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 AC005972.2-201ENST00000604690 348 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 AC012640.5-201ENST00000623897 319 ntBASIC1.61□□□□□ -2.15
LINC00479Q96M42 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LINC00479Q96M42 Y_RNA.24-201ENST00000362508 103 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 RNU6-682P-201ENST00000363843 106 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 SNORA38-201ENST00000363946 132 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 RNU6-899P-201ENST00000363947 107 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 SNORA3A-201ENST00000364113 130 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 PCNPP3-201ENST00000393579 471 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 MIR1283-2-201ENST00000408621 87 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 SNORA36B-201ENST00000410438 131 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 AL135786.1-201ENST00000415892 214 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC00479Q96M42 AL162725.1-201ENST00000435405 301 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 AL353689.1-201ENST00000438895 199 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 SUMO1P2-201ENST00000452524 304 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 AL138752.1-201ENST00000452964 351 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC00479Q96M42 RNU1-131P-201ENST00000458943 161 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.6□□□□□ -2.15
LINC00479Q96M42 RNA5SP281-201ENST00000516504 135 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 AP005660.1-201ENST00000522972 293 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC00479Q96M42 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LINC00479Q96M42 MIR3126-201ENST00000577443 74 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 POLR3GP1-201ENST00000594073 261 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 AL929325.1-201ENST00000603096 117 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 AC073413.2-201ENST00000604332 360 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC00479Q96M42 AL449363.1-201ENST00000617815 186 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
LINC00479Q96M42 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
LINC00479Q96M42 AC009487.4-201ENST00000624969 3585 ntBASIC1.6□□□□□ -2.15
LINC00479Q96M42 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LINC00479Q96M42 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
LINC00479Q96M42 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
LINC00479Q96M42 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
LINC00479Q96M42 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.59□□□□□ -2.15
LINC00479Q96M42 Y_RNA.262-201ENST00000364641 102 ntBASIC1.59□□□□□ -2.15
LINC00479Q96M42 MIR626-201ENST00000385032 94 ntBASIC1.59□□□□□ -2.15
LINC00479Q96M42 MT-TT-201ENST00000387460 66 ntBASIC1.59□□□□□ -2.15
LINC00479Q96M42 SNORA48.3-201ENST00000391081 134 ntBASIC1.59□□□□□ -2.15
LINC00479Q96M42 RNU11-3P-201ENST00000391111 133 ntBASIC1.59□□□□□ -2.15
LINC00479Q96M42 RNU2-2P-201ENST00000410396 191 ntBASIC1.59□□□□□ -2.15
LINC00479Q96M42 RN7SKP284-201ENST00000411002 343 ntBASIC1.59□□□□□ -2.15
LINC00479Q96M42 RNA5SP508-201ENST00000411327 119 ntBASIC1.59□□□□□ -2.15
LINC00479Q96M42 AL356379.1-201ENST00000414105 126 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms