Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RNU6-1010P-201ENST00000362757 107 ntBASIC3.92□□□□□ -1.78
TRIM47Q96LD4 SNORD45B-201ENST00000364617 72 ntBASIC3.92□□□□□ -1.78
TRIM47Q96LD4 RNU6-409P-201ENST00000384114 104 ntBASIC3.92□□□□□ -1.78
TRIM47Q96LD4 MIR518F-201ENST00000384973 87 ntBASIC3.92□□□□□ -1.78
TRIM47Q96LD4 SNRPGP13-201ENST00000442212 177 ntBASIC3.92□□□□□ -1.78
TRIM47Q96LD4 AC114801.3-201ENST00000510231 177 ntBASIC3.92□□□□□ -1.78
TRIM47Q96LD4 RNU7-172P-201ENST00000517125 64 ntBASIC3.92□□□□□ -1.78
TRIM47Q96LD4 MIR3618-201ENST00000580330 88 ntBASIC3.92□□□□□ -1.78
TRIM47Q96LD4 MIR4305-201ENST00000583252 102 ntBASIC3.92□□□□□ -1.78
TRIM47Q96LD4 MIR3117-201ENST00000584034 78 ntBASIC3.92□□□□□ -1.78
TRIM47Q96LD4 AC006023.1-201ENST00000603944 259 ntBASIC3.92□□□□□ -1.78
TRIM47Q96LD4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM47Q96LD4 MIR1255B1-201ENST00000636325 63 ntBASIC3.92□□□□□ -1.78
TRIM47Q96LD4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM47Q96LD4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM47Q96LD4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM47Q96LD4 RNU6-509P-201ENST00000363519 107 ntBASIC3.91□□□□□ -1.78
TRIM47Q96LD4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM47Q96LD4 SNORA44-201ENST00000384584 132 ntBASIC3.91□□□□□ -1.78
TRIM47Q96LD4 MIR1283-1-201ENST00000408494 87 ntBASIC3.91□□□□□ -1.78
TRIM47Q96LD4 RNU6-57P-201ENST00000411348 103 ntBASIC3.91□□□□□ -1.78
TRIM47Q96LD4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM47Q96LD4 AL159169.1-201ENST00000421119 127 ntBASIC3.91□□□□□ -1.78
TRIM47Q96LD4 RPS27P22-201ENST00000478056 241 ntBASIC3.91□□□□□ -1.78
TRIM47Q96LD4 RNU5F-4P-201ENST00000516581 114 ntBASIC3.91□□□□□ -1.78
TRIM47Q96LD4 RNU6-1098P-201ENST00000516772 96 ntBASIC3.91□□□□□ -1.78
TRIM47Q96LD4 AC026333.2-201ENST00000542164 106 ntBASIC3.91□□□□□ -1.78
TRIM47Q96LD4 MIR4425-201ENST00000580572 84 ntBASIC3.91□□□□□ -1.78
TRIM47Q96LD4 MIR4712-201ENST00000583750 82 ntBASIC3.91□□□□□ -1.78
TRIM47Q96LD4 AC145423.2-201ENST00000610631 239 ntBASIC3.91□□□□□ -1.78
TRIM47Q96LD4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM47Q96LD4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM47Q96LD4 snoU2_19.1-201ENST00000362361 80 ntBASIC3.9□□□□□ -1.79
TRIM47Q96LD4 RNU6-363P-201ENST00000362895 105 ntBASIC3.9□□□□□ -1.79
TRIM47Q96LD4 Y_RNA.95-201ENST00000363079 95 ntBASIC3.9□□□□□ -1.79
TRIM47Q96LD4 RNA5SP126-201ENST00000365092 109 ntBASIC3.9□□□□□ -1.79
TRIM47Q96LD4 SNORD6-201ENST00000365444 73 ntBASIC3.9□□□□□ -1.79
TRIM47Q96LD4 MIR184-201ENST00000384962 84 ntBASIC3.9□□□□□ -1.79
TRIM47Q96LD4 MIR605-201ENST00000385078 83 ntBASIC3.9□□□□□ -1.79
TRIM47Q96LD4 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
TRIM47Q96LD4 RN7SL594P-201ENST00000470590 287 ntBASIC3.9□□□□□ -1.79
TRIM47Q96LD4 RNU2-35P-201ENST00000516446 142 ntBASIC3.9□□□□□ -1.79
TRIM47Q96LD4 RPL12P50-201ENST00000603116 116 ntBASIC3.9□□□□□ -1.79
TRIM47Q96LD4 AC073413.2-201ENST00000604332 360 ntBASIC3.9□□□□□ -1.79
TRIM47Q96LD4 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.9□□□□□ -1.79
TRIM47Q96LD4 AC087741.2-201ENST00000619415 172 ntBASIC3.9□□□□□ -1.79
TRIM47Q96LD4 AC006435.5-201ENST00000624486 112 ntBASIC3.9□□□□□ -1.79
TRIM47Q96LD4 MIR3199-2-201ENST00000636243 86 ntBASIC3.9□□□□□ -1.79
TRIM47Q96LD4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM47Q96LD4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM47Q96LD4 AC026241.1-201ENST00000517873 2142 ntBASIC3.89□□□□□ -1.79
TRIM47Q96LD4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM47Q96LD4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM47Q96LD4 Y_RNA.467-201ENST00000384297 102 ntBASIC3.89□□□□□ -1.79
TRIM47Q96LD4 RNU1-131P-201ENST00000458943 161 ntBASIC3.89□□□□□ -1.79
TRIM47Q96LD4 RNU7-70P-201ENST00000516941 66 ntBASIC3.89□□□□□ -1.79
TRIM47Q96LD4 MIR4753-201ENST00000585119 83 ntBASIC3.89□□□□□ -1.79
TRIM47Q96LD4 AC104984.5-201ENST00000586878 94 ntBASIC3.89□□□□□ -1.79
TRIM47Q96LD4 U7.8-201ENST00000619968 63 ntBASIC3.89□□□□□ -1.79
TRIM47Q96LD4 MIR203B-201ENST00000636080 86 ntBASIC3.89□□□□□ -1.79
TRIM47Q96LD4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM47Q96LD4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM47Q96LD4 MFSD8-233ENST00000641482 4860 ntBASIC3.89□□□□□ -1.79
TRIM47Q96LD4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM47Q96LD4 AC091564.4-201ENST00000533934 2194 ntBASIC3.88□□□□□ -1.79
TRIM47Q96LD4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
TRIM47Q96LD4 RNU6-1210P-201ENST00000363775 107 ntBASIC3.88□□□□□ -1.79
TRIM47Q96LD4 RNU6-616P-201ENST00000384353 107 ntBASIC3.88□□□□□ -1.79
TRIM47Q96LD4 Y_RNA.545-201ENST00000384652 105 ntBASIC3.88□□□□□ -1.79
TRIM47Q96LD4 RPL30P4-201ENST00000429309 333 ntBASIC3.88□□□□□ -1.79
TRIM47Q96LD4 AL357552.1-201ENST00000445254 415 ntBASIC3.88□□□□□ -1.79
TRIM47Q96LD4 HMGN2P16-201ENST00000456802 261 ntBASIC3.88□□□□□ -1.79
TRIM47Q96LD4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.88□□□□□ -1.79
TRIM47Q96LD4 AL137790.1-201ENST00000634283 177 ntBASIC3.88□□□□□ -1.79
TRIM47Q96LD4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM47Q96LD4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM47Q96LD4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM47Q96LD4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM47Q96LD4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
TRIM47Q96LD4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
TRIM47Q96LD4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM47Q96LD4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM47Q96LD4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM47Q96LD4 RNU6-655P-201ENST00000362858 107 ntBASIC3.87□□□□□ -1.79
TRIM47Q96LD4 RNU1-22P-201ENST00000363334 158 ntBASIC3.87□□□□□ -1.79
TRIM47Q96LD4 RNU4-67P-201ENST00000364569 141 ntBASIC3.87□□□□□ -1.79
TRIM47Q96LD4 MIR300-201ENST00000401138 83 ntBASIC3.87□□□□□ -1.79
TRIM47Q96LD4 RNU2-49P-201ENST00000410666 184 ntBASIC3.87□□□□□ -1.79
TRIM47Q96LD4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.87□□□□□ -1.79
TRIM47Q96LD4 AC107083.1-201ENST00000439643 279 ntBASIC3.87□□□□□ -1.79
TRIM47Q96LD4 AC016717.1-201ENST00000448918 286 ntBASIC3.87□□□□□ -1.79
TRIM47Q96LD4 AC010099.1-201ENST00000455434 375 ntBASIC3.87□□□□□ -1.79
TRIM47Q96LD4 AC008507.4-201ENST00000585464 127 ntBASIC3.87□□□□□ -1.79
TRIM47Q96LD4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM47Q96LD4 Y_RNA.773-201ENST00000607168 90 ntBASIC3.87□□□□□ -1.79
TRIM47Q96LD4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM47Q96LD4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
TRIM47Q96LD4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM47Q96LD4 AC000403.1-201ENST00000613696 3585 ntBASIC3.86□□□□□ -1.79
TRIM47Q96LD4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms