Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 Y_RNA.489-201ENST00000384410 101 ntBASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 SNORA64-201ENST00000384674 134 ntBASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 HSPE1P21-201ENST00000438283 308 ntBASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 AL021397.1-201ENST00000451806 248 ntBASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 AC025033.1-201ENST00000463883 194 ntBASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 AL163195.1-201ENST00000496941 348 ntBASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 RNU6-1023P-201ENST00000516137 106 ntBASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 AC024995.1-201ENST00000523014 93 ntBASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 AC091544.4-201ENST00000555268 342 ntBASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 MIR4513-201ENST00000581077 86 ntBASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 AC069114.2-201ENST00000604699 304 ntBASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 AC004832.4-201ENST00000608952 331 ntBASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 AL773524.1-201ENST00000614065 229 ntBASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 U1.36-201ENST00000620684 176 ntBASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 RNU4-13P-201ENST00000364019 141 ntBASIC2.3□□□□□ -2.04
CDK5RAP3Q96JB5 RNU6-1048P-201ENST00000364054 107 ntBASIC2.3□□□□□ -2.04
CDK5RAP3Q96JB5 Y_RNA.478-201ENST00000384358 107 ntBASIC2.3□□□□□ -2.04
CDK5RAP3Q96JB5 RNU6-1289P-201ENST00000384431 106 ntBASIC2.3□□□□□ -2.04
CDK5RAP3Q96JB5 SNORA48.1-201ENST00000390879 135 ntBASIC2.3□□□□□ -2.04
CDK5RAP3Q96JB5 AL023284.1-201ENST00000403956 276 ntBASIC2.3□□□□□ -2.04
CDK5RAP3Q96JB5 RNA5SP57-201ENST00000459463 123 ntBASIC2.3□□□□□ -2.04
CDK5RAP3Q96JB5 AL162424.1-201ENST00000602325 221 ntBASIC2.3□□□□□ -2.04
CDK5RAP3Q96JB5 MIR219B-201ENST00000637023 88 ntBASIC2.3□□□□□ -2.04
CDK5RAP3Q96JB5 AC068647.2-201ENST00000637380 353 ntBASIC2.3□□□□□ -2.04
CDK5RAP3Q96JB5 RNU6-1272P-201ENST00000362776 107 ntBASIC2.29□□□□□ -2.04
CDK5RAP3Q96JB5 Y_RNA.217-201ENST00000364214 105 ntBASIC2.29□□□□□ -2.04
CDK5RAP3Q96JB5 RNA5SP160-201ENST00000364866 120 ntBASIC2.29□□□□□ -2.04
CDK5RAP3Q96JB5 SNORA67.3-201ENST00000384366 140 ntBASIC2.29□□□□□ -2.04
CDK5RAP3Q96JB5 MT-TG-201ENST00000387429 68 ntBASIC2.29□□□□□ -2.04
CDK5RAP3Q96JB5 RNU6-763P-201ENST00000390865 106 ntBASIC2.29□□□□□ -2.04
CDK5RAP3Q96JB5 SNORA26.5-201ENST00000391215 123 ntBASIC2.29□□□□□ -2.04
CDK5RAP3Q96JB5 RNU2-14P-201ENST00000411053 191 ntBASIC2.29□□□□□ -2.04
CDK5RAP3Q96JB5 RN7SKP192-201ENST00000411291 327 ntBASIC2.29□□□□□ -2.04
CDK5RAP3Q96JB5 AC244636.1-201ENST00000421152 228 ntBASIC2.29□□□□□ -2.04
CDK5RAP3Q96JB5 BTF3P11-201ENST00000426582 477 ntBASIC2.29□□□□□ -2.04
CDK5RAP3Q96JB5 AL162725.1-201ENST00000435405 301 ntBASIC2.29□□□□□ -2.04
CDK5RAP3Q96JB5 Y_RNA.641-201ENST00000459414 105 ntBASIC2.29□□□□□ -2.04
CDK5RAP3Q96JB5 TRBV12-1-201ENST00000479785 344 ntBASIC2.29□□□□□ -2.04
CDK5RAP3Q96JB5 RPL23AP94-201ENST00000512518 302 ntBASIC2.29□□□□□ -2.04
CDK5RAP3Q96JB5 AC015720.1-201ENST00000565251 277 ntBASIC2.29□□□□□ -2.04
CDK5RAP3Q96JB5 BX284668.6-201ENST00000606899 438 ntBASIC2.29□□□□□ -2.04
CDK5RAP3Q96JB5 Y_RNA.783-201ENST00000613546 102 ntBASIC2.29□□□□□ -2.04
CDK5RAP3Q96JB5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
CDK5RAP3Q96JB5 Y_RNA.20-201ENST00000362479 113 ntBASIC2.28□□□□□ -2.04
CDK5RAP3Q96JB5 U8.2-201ENST00000363156 134 ntBASIC2.28□□□□□ -2.04
CDK5RAP3Q96JB5 RNU6-1019P-201ENST00000364424 107 ntBASIC2.28□□□□□ -2.04
CDK5RAP3Q96JB5 Y_RNA.476-201ENST00000384347 108 ntBASIC2.28□□□□□ -2.04
CDK5RAP3Q96JB5 Y_RNA.590-201ENST00000410140 107 ntBASIC2.28□□□□□ -2.04
CDK5RAP3Q96JB5 RNU6-651P-201ENST00000411040 105 ntBASIC2.28□□□□□ -2.04
CDK5RAP3Q96JB5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.28□□□□□ -2.04
CDK5RAP3Q96JB5 HMGN2P19-201ENST00000425149 265 ntBASIC2.28□□□□□ -2.04
CDK5RAP3Q96JB5 RNU6-717P-201ENST00000459076 104 ntBASIC2.28□□□□□ -2.04
CDK5RAP3Q96JB5 Y_RNA.679-201ENST00000516416 91 ntBASIC2.28□□□□□ -2.04
CDK5RAP3Q96JB5 AC084364.2-201ENST00000546924 395 ntBASIC2.28□□□□□ -2.04
CDK5RAP3Q96JB5 MIR4643-201ENST00000577473 78 ntBASIC2.28□□□□□ -2.04
CDK5RAP3Q96JB5 AC005972.2-201ENST00000604690 348 ntBASIC2.28□□□□□ -2.04
CDK5RAP3Q96JB5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.28□□□□□ -2.04
CDK5RAP3Q96JB5 snoU18.1-201ENST00000629629 71 ntBASIC2.28□□□□□ -2.04
CDK5RAP3Q96JB5 AC134026.1-201ENST00000623249 2239 ntBASIC2.27□□□□□ -2.05
CDK5RAP3Q96JB5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDK5RAP3Q96JB5 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDK5RAP3Q96JB5 Y_RNA.65-201ENST00000362846 100 ntBASIC2.27□□□□□ -2.05
CDK5RAP3Q96JB5 SNORA72.4-201ENST00000384174 132 ntBASIC2.27□□□□□ -2.05
CDK5RAP3Q96JB5 RNU11-5P-201ENST00000391216 129 ntBASIC2.27□□□□□ -2.05
CDK5RAP3Q96JB5 MTCO2P33-201ENST00000402100 465 ntBASIC2.27□□□□□ -2.05
CDK5RAP3Q96JB5 U8.19-201ENST00000459095 133 ntBASIC2.27□□□□□ -2.05
CDK5RAP3Q96JB5 Y_RNA.637-201ENST00000459424 114 ntBASIC2.27□□□□□ -2.05
CDK5RAP3Q96JB5 RPL23AP42-201ENST00000471152 471 ntBASIC2.27□□□□□ -2.05
CDK5RAP3Q96JB5 RPL36AP21-201ENST00000490372 323 ntBASIC2.27□□□□□ -2.05
CDK5RAP3Q96JB5 MRPS17P9-201ENST00000511924 393 ntBASIC2.27□□□□□ -2.05
CDK5RAP3Q96JB5 IGKV3-31-201ENST00000523109 329 ntBASIC2.27□□□□□ -2.05
CDK5RAP3Q96JB5 AL096840.1-201ENST00000603287 93 ntBASIC2.27□□□□□ -2.05
CDK5RAP3Q96JB5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
CDK5RAP3Q96JB5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDK5RAP3Q96JB5 AC018630.2-201ENST00000534866 2403 ntBASIC2.26□□□□□ -2.05
CDK5RAP3Q96JB5 Y_RNA.539-201ENST00000384635 107 ntBASIC2.26□□□□□ -2.05
CDK5RAP3Q96JB5 RNA5SP212-201ENST00000391223 107 ntBASIC2.26□□□□□ -2.05
CDK5RAP3Q96JB5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.26□□□□□ -2.05
CDK5RAP3Q96JB5 AL139156.1-201ENST00000412785 841 ntBASIC2.26□□□□□ -2.05
CDK5RAP3Q96JB5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.26□□□□□ -2.05
CDK5RAP3Q96JB5 AC245047.4-201ENST00000433189 144 ntBASIC2.26□□□□□ -2.05
CDK5RAP3Q96JB5 AC104332.1-201ENST00000440471 797 ntBASIC2.26□□□□□ -2.05
CDK5RAP3Q96JB5 RNU7-141P-201ENST00000459304 62 ntBASIC2.26□□□□□ -2.05
CDK5RAP3Q96JB5 AC091021.1-201ENST00000468051 388 ntBASIC2.26□□□□□ -2.05
CDK5RAP3Q96JB5 RPS26P45-201ENST00000471748 340 ntBASIC2.26□□□□□ -2.05
CDK5RAP3Q96JB5 AC117454.1-201ENST00000491120 168 ntBASIC2.26□□□□□ -2.05
CDK5RAP3Q96JB5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.26□□□□□ -2.05
CDK5RAP3Q96JB5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.26□□□□□ -2.05
CDK5RAP3Q96JB5 AL078604.3-201ENST00000615580 211 ntBASIC2.26□□□□□ -2.05
CDK5RAP3Q96JB5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CDK5RAP3Q96JB5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CDK5RAP3Q96JB5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
CDK5RAP3Q96JB5 RNU6-379P-201ENST00000363813 104 ntBASIC2.25□□□□□ -2.05
CDK5RAP3Q96JB5 U8.7-201ENST00000364940 136 ntBASIC2.25□□□□□ -2.05
CDK5RAP3Q96JB5 RNU6-338P-201ENST00000383888 105 ntBASIC2.25□□□□□ -2.05
CDK5RAP3Q96JB5 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms