Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC008134.1-201ENST00000420943 193 ntBASIC1.57□□□□□ -2.16
PDLIM5Q96HC4 MTCYBP9-201ENST00000431021 303 ntBASIC1.57□□□□□ -2.16
PDLIM5Q96HC4 AC245517.4-201ENST00000448601 281 ntBASIC1.57□□□□□ -2.16
PDLIM5Q96HC4 RN7SL429P-201ENST00000479090 223 ntBASIC1.57□□□□□ -2.16
PDLIM5Q96HC4 RN7SL489P-201ENST00000486185 223 ntBASIC1.57□□□□□ -2.16
PDLIM5Q96HC4 RN7SL327P-201ENST00000488659 223 ntBASIC1.57□□□□□ -2.16
PDLIM5Q96HC4 AC010598.1-201ENST00000510378 103 ntBASIC1.57□□□□□ -2.16
PDLIM5Q96HC4 RNU7-110P-201ENST00000516891 62 ntBASIC1.57□□□□□ -2.16
PDLIM5Q96HC4 RNA5SP437-201ENST00000517249 129 ntBASIC1.57□□□□□ -2.16
PDLIM5Q96HC4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.57□□□□□ -2.16
PDLIM5Q96HC4 SNORD113-5-201ENST00000607261 78 ntBASIC1.57□□□□□ -2.16
PDLIM5Q96HC4 RN7SL853P-201ENST00000617250 223 ntBASIC1.57□□□□□ -2.16
PDLIM5Q96HC4 MIR8062-201ENST00000621515 85 ntBASIC1.57□□□□□ -2.16
PDLIM5Q96HC4 AC006001.4-201ENST00000622243 395 ntBASIC1.57□□□□□ -2.16
PDLIM5Q96HC4 MIR338-201ENST00000636369 67 ntBASIC1.57□□□□□ -2.16
PDLIM5Q96HC4 snoU2-30.2-201ENST00000362805 70 ntBASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 Y_RNA.84-201ENST00000363011 104 ntBASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 Y_RNA.331-201ENST00000365267 102 ntBASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 Y_RNA.376-201ENST00000365638 108 ntBASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 Y_RNA.541-201ENST00000384640 113 ntBASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 MT-TW-201ENST00000387382 68 ntBASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 Y_RNA.602-201ENST00000410535 92 ntBASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 AL121890.1-201ENST00000435457 205 ntBASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 HMGN2P34-201ENST00000437647 269 ntBASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 AC005042.3-201ENST00000453230 174 ntBASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 RNA5SP445-201ENST00000515889 115 ntBASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 SNORA77B-201ENST00000578179 125 ntBASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 MIR3684-201ENST00000579779 74 ntBASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 AP001485.1-201ENST00000604799 199 ntBASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 MIR8081-201ENST00000611533 95 ntBASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 AC127459.3-201ENST00000624328 466 ntBASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
PDLIM5Q96HC4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.55□□□□□ -2.16
PDLIM5Q96HC4 SNORD114-7-201ENST00000362520 77 ntBASIC1.55□□□□□ -2.16
PDLIM5Q96HC4 SNORA27.1-201ENST00000362604 124 ntBASIC1.55□□□□□ -2.16
PDLIM5Q96HC4 RNU6-271P-201ENST00000363858 105 ntBASIC1.55□□□□□ -2.16
PDLIM5Q96HC4 RNU6-472P-201ENST00000384299 107 ntBASIC1.55□□□□□ -2.16
PDLIM5Q96HC4 snoU13.27-201ENST00000459278 104 ntBASIC1.55□□□□□ -2.16
PDLIM5Q96HC4 AC079140.2-201ENST00000506193 142 ntBASIC1.55□□□□□ -2.16
PDLIM5Q96HC4 RNU6-155P-201ENST00000516347 100 ntBASIC1.55□□□□□ -2.16
PDLIM5Q96HC4 SNORA25.15-201ENST00000516487 89 ntBASIC1.55□□□□□ -2.16
PDLIM5Q96HC4 AC006380.1-201ENST00000603598 186 ntBASIC1.55□□□□□ -2.16
PDLIM5Q96HC4 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.55□□□□□ -2.16
PDLIM5Q96HC4 U6.108-201ENST00000637764 58 ntBASIC1.55□□□□□ -2.16
PDLIM5Q96HC4 Y_RNA.149-201ENST00000363558 117 ntBASIC1.54□□□□□ -2.16
PDLIM5Q96HC4 Y_RNA.329-201ENST00000365209 107 ntBASIC1.54□□□□□ -2.16
PDLIM5Q96HC4 RNU6-417P-201ENST00000384712 107 ntBASIC1.54□□□□□ -2.16
PDLIM5Q96HC4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
PDLIM5Q96HC4 RNA5SP323-201ENST00000391094 133 ntBASIC1.54□□□□□ -2.16
PDLIM5Q96HC4 AL031003.1-201ENST00000404229 172 ntBASIC1.54□□□□□ -2.16
PDLIM5Q96HC4 RNU6-1203P-201ENST00000410703 110 ntBASIC1.54□□□□□ -2.16
PDLIM5Q96HC4 RNU2-61P-201ENST00000411069 191 ntBASIC1.54□□□□□ -2.16
PDLIM5Q96HC4 OOSP1P1-201ENST00000423265 274 ntBASIC1.54□□□□□ -2.16
PDLIM5Q96HC4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.54□□□□□ -2.16
PDLIM5Q96HC4 AC024995.1-201ENST00000523014 93 ntBASIC1.54□□□□□ -2.16
PDLIM5Q96HC4 MIR4503-201ENST00000582187 83 ntBASIC1.54□□□□□ -2.16
PDLIM5Q96HC4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.54□□□□□ -2.16
PDLIM5Q96HC4 U6.73-201ENST00000619194 103 ntBASIC1.54□□□□□ -2.16
PDLIM5Q96HC4 AL121890.5-201ENST00000620848 304 ntBASIC1.54□□□□□ -2.16
PDLIM5Q96HC4 AC006435.5-201ENST00000624486 112 ntBASIC1.54□□□□□ -2.16
PDLIM5Q96HC4 Y_RNA.16-201ENST00000362421 102 ntBASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 Y_RNA.124-201ENST00000363339 93 ntBASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 Y_RNA.383-201ENST00000383855 97 ntBASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 RNU6-950P-201ENST00000384651 107 ntBASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 RNU6-21P-201ENST00000384710 107 ntBASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 MIR504-201ENST00000385065 83 ntBASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 RNA5SP467-201ENST00000391274 118 ntBASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 CYCSP49-201ENST00000420810 319 ntBASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 RNU1-98P-201ENST00000458992 160 ntBASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 RPS26P55-201ENST00000471178 356 ntBASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 RNU6-902P-201ENST00000517212 91 ntBASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 AC027419.1-201ENST00000522976 328 ntBASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 MIR4709-201ENST00000577272 72 ntBASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 AP001282.2-201ENST00000616149 309 ntBASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
PDLIM5Q96HC4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.53□□□□□ -2.17
PDLIM5Q96HC4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.17
PDLIM5Q96HC4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
PDLIM5Q96HC4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.52□□□□□ -2.17
PDLIM5Q96HC4 RNU4-90P-201ENST00000362773 141 ntBASIC1.52□□□□□ -2.17
PDLIM5Q96HC4 RNU6-1266P-201ENST00000362794 105 ntBASIC1.52□□□□□ -2.17
PDLIM5Q96HC4 SNORA33-201ENST00000363664 130 ntBASIC1.52□□□□□ -2.17
PDLIM5Q96HC4 Y_RNA.396-201ENST00000383949 103 ntBASIC1.52□□□□□ -2.17
PDLIM5Q96HC4 Y_RNA.418-201ENST00000384029 102 ntBASIC1.52□□□□□ -2.17
PDLIM5Q96HC4 RNU6-574P-201ENST00000384265 107 ntBASIC1.52□□□□□ -2.17
PDLIM5Q96HC4 Y_RNA.483-201ENST00000384380 101 ntBASIC1.52□□□□□ -2.17
PDLIM5Q96HC4 Y_RNA.518-201ENST00000384552 113 ntBASIC1.52□□□□□ -2.17
PDLIM5Q96HC4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
PDLIM5Q96HC4 MIR873-201ENST00000401120 77 ntBASIC1.52□□□□□ -2.17
PDLIM5Q96HC4 SUMO1P2-201ENST00000452524 304 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms